RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 ATG18P43601 500 aa8.11□□□□□ -1.11
LSR1LSR1 NUP57P48837 541 aa8.11□□□□□ -1.11
LSR1LSR1 HOS2P53096 452 aaPredicted RBP8.11□□□□□ -1.11
LSR1LSR1 CDH1P53197 566 aa8.11□□□□□ -1.11
LSR1LSR1 ERV29P53337 310 aa8.11□□□□□ -1.11
LSR1LSR1 RRN9P53437 365 aa8.11□□□□□ -1.11
LSR1LSR1 COS1P53822 381 aa8.11□□□□□ -1.11
LSR1LSR1 DML1Q03652 475 aa8.11□□□□□ -1.11
LSR1LSR1 PLB2Q03674 706 aa8.11□□□□□ -1.11
LSR1LSR1 BUR2Q05949 395 aa8.11□□□□□ -1.11
LSR1LSR1 YLR346CQ06139 101 aa8.11□□□□□ -1.11
LSR1LSR1 YLR031WQ07978 186 aa8.11□□□□□ -1.11
LSR1LSR1 PFA4Q12006 378 aa8.11□□□□□ -1.11
LSR1LSR1 YPR022CQ12139 1133 aa8.11□□□□□ -1.11
LSR1LSR1 FMP16Q12497 93 aa8.11□□□□□ -1.11
LSR1LSR1 YBR298C-AQ8TGK4 73 aa8.11□□□□□ -1.11
LSR1LSR1 Q0182Q9ZZW1 134 aa8.11□□□□□ -1.11
LSR1LSR1 MOD5P07884 428 aa8.1□□□□□ -1.11
LSR1LSR1 YCK1P23291 538 aa8.1□□□□□ -1.11
LSR1LSR1 PRE7P23724 241 aaKnown RBP8.1□□□□□ -1.11
LSR1LSR1 DBP2P24783 546 aaKnown RBP8.1□□□□□ -1.11
LSR1LSR1 YPT7P32939 208 aa8.1□□□□□ -1.11
LSR1LSR1 MRPL37P36532 105 aa8.1□□□□□ -1.11
LSR1LSR1 YBR137WP38276 179 aa8.1□□□□□ -1.11
LSR1LSR1 RTC2P38279 296 aa8.1□□□□□ -1.11
LSR1LSR1 PLB1P39105 664 aa8.1□□□□□ -1.11
LSR1LSR1 OSW5P40219 148 aa8.1□□□□□ -1.11
LSR1LSR1 LSM1P47017 172 aaKnown RBP8.1□□□□□ -1.11
LSR1LSR1 LSM7P53905 115 aaKnown RBP8.1□□□□□ -1.11
LSR1LSR1 NGL2Q03264 515 aaKnown RBP8.1□□□□□ -1.11
LSR1LSR1 YLR283WQ05867 314 aa8.1□□□□□ -1.11
LSR1LSR1 TPO3Q06451 622 aa8.1□□□□□ -1.11
LSR1LSR1 GPN3Q06543 272 aa8.1□□□□□ -1.11
LSR1LSR1 SKI7Q08491 747 aaPredicted RBP8.1□□□□□ -1.11
LSR1LSR1 MDM32Q12171 622 aa8.1□□□□□ -1.11
LSR1LSR1 SKM1Q12469 655 aa8.1□□□□□ -1.11
LSR1LSR1 SKS1Q12505 502 aa8.1□□□□□ -1.11
LSR1LSR1 YLR111WQ12528 110 aa8.1□□□□□ -1.11
LSR1LSR1 RAS1P01119 309 aa8.09□□□□□ -1.11
LSR1LSR1 PET54P10834 293 aa8.09□□□□□ -1.11
LSR1LSR1 RED1P14291 827 aa8.09□□□□□ -1.11
LSR1LSR1 CMP2P14747 604 aa8.09□□□□□ -1.11
LSR1LSR1 SLY41P22215 453 aa8.09□□□□□ -1.11
LSR1LSR1 YCR102CP25608 368 aa8.09□□□□□ -1.11
LSR1LSR1 ADE1P27616 306 aa8.09□□□□□ -1.11
LSR1LSR1 TAF14P35189 244 aa8.09□□□□□ -1.11
LSR1LSR1 DOA1P36037 715 aa8.09□□□□□ -1.11
LSR1LSR1 ANR2P36090 516 aaPredicted RBP8.09□□□□□ -1.11
LSR1LSR1 APT2P36973 181 aa8.09□□□□□ -1.11
LSR1LSR1 GID8P40208 455 aa8.09□□□□□ -1.11
LSR1LSR1 SWM2P40342 146 aa8.09□□□□□ -1.11
LSR1LSR1 ALB1P47019 175 aaPredicted RBP8.09□□□□□ -1.11
LSR1LSR1 ECM27P47144 725 aa8.09□□□□□ -1.11
LSR1LSR1 BAT2P47176 376 aaKnown RBP8.09□□□□□ -1.11
LSR1LSR1 MAL11P53048 616 aa8.09□□□□□ -1.11
LSR1LSR1 NPY1P53164 384 aa8.09□□□□□ -1.11
LSR1LSR1 AQR1P53943 586 aa8.09□□□□□ -1.11
LSR1LSR1 CTL1Q03220 320 aaKnown RBP8.09□□□□□ -1.11
LSR1LSR1 YDR344CQ05510 147 aa8.09□□□□□ -1.11
LSR1LSR1 FEX1Q08913 375 aa8.09□□□□□ -1.11
LSR1LSR1 YDL176WQ12027 708 aa8.09□□□□□ -1.11
LSR1LSR1 RKM5Q12367 367 aa8.09□□□□□ -1.11
LSR1LSR1 TY1A-NL1Q12391 440 aaKnown RBP8.09□□□□□ -1.11
LSR1LSR1 YGR161W-CQ3E744 92 aa8.09□□□□□ -1.11
LSR1LSR1 FLP1P03870 423 aa8.08□□□□□ -1.12
LSR1LSR1 YOL162WP0CF19 215 aa8.08□□□□□ -1.12
LSR1LSR1 HOM2P13663 365 aaKnown RBP8.08□□□□□ -1.12
LSR1LSR1 ERD1P16151 362 aa8.08□□□□□ -1.12
LSR1LSR1 SNC1P31109 117 aa8.08□□□□□ -1.12
LSR1LSR1 RNP1P32385 249 aa8.08□□□□□ -1.12
LSR1LSR1 ERG1P32476 496 aaKnown RBP8.08□□□□□ -1.12
LSR1LSR1 MTC2P34246 357 aa8.08□□□□□ -1.12
LSR1LSR1 TCD2P36101 447 aaKnown RBP8.08□□□□□ -1.12
LSR1LSR1 TAT1P38085 619 aa8.08□□□□□ -1.12
LSR1LSR1 DED81P38707 554 aaKnown RBP8.08□□□□□ -1.12
LSR1LSR1 MED6P38782 295 aa8.08□□□□□ -1.12
LSR1LSR1 FMC1P40491 155 aa8.08□□□□□ -1.12
LSR1LSR1 TED1P40533 473 aa8.08□□□□□ -1.12
LSR1LSR1 CIN1P40987 1014 aa8.08□□□□□ -1.12
LSR1LSR1 PAM16P42949 149 aa8.08□□□□□ -1.12
LSR1LSR1 HAM1P47119 197 aaKnown RBP8.08□□□□□ -1.12
LSR1LSR1 ATF2P53296 535 aa8.08□□□□□ -1.12
LSR1LSR1 TDA7P53882 636 aaPredicted RBP8.08□□□□□ -1.12
LSR1LSR1 SPC3Q12133 184 aa8.08□□□□□ -1.12
LSR1LSR1 YOR114WQ12219 294 aa8.08□□□□□ -1.12
LSR1LSR1 YOL114CQ12322 202 aa8.08□□□□□ -1.12
LSR1LSR1 RRP12Q12754 1228 aaKnown RBP8.08□□□□□ -1.12
LSR1LSR1 PNO1Q99216 274 aaKnown RBP8.08□□□□□ -1.12
LSR1LSR1 CCH1P50077 2039 aa8.07□□□□□ -1.12
LSR1LSR1 RPA135P22138 1203 aaKnown RBP8.07□□□□□ -1.12
LSR1LSR1 FPS1P23900 669 aa8.07□□□□□ -1.12
LSR1LSR1 YCR100CP25606 316 aa8.07□□□□□ -1.12
LSR1LSR1 ERG9P29704 444 aa8.07□□□□□ -1.12
LSR1LSR1 HOM6P31116 359 aaKnown RBP8.07□□□□□ -1.12
LSR1LSR1 RPS0AP32905 252 aaKnown RBP8.07□□□□□ -1.12
LSR1LSR1 JEN1P36035 616 aa8.07□□□□□ -1.12
LSR1LSR1 MRPL3P36516 390 aa8.07□□□□□ -1.12
LSR1LSR1 MCM7P38132 845 aa8.07□□□□□ -1.12
LSR1LSR1 YHR097CP38809 366 aaKnown RBP8.07□□□□□ -1.12
LSR1LSR1 RRD1P40454 393 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms