RNA–Protein interactions for RNA: ENST00000616760.1

CLIC1-210, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIC1, Length 1,098 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-210ENST00000616760 SMARCC2Q8TAQ2 1214 aa11.15□□□□□ -0.62
CLIC1-210ENST00000616760 CUL5Q93034 780 aa11.15□□□□□ -0.62
CLIC1-210ENST00000616760 HCN4Q9Y3Q4 1203 aa11.15□□□□□ -0.62
CLIC1-210ENST00000616760 PIEZO1Q92508 2521 aa11.15□□□□□ -0.62
CLIC1-210ENST00000616760 CHD9Q3L8U1 2897 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 PTPRSQ13332 1948 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 KIF28PB7ZC32 967 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 GPC1P35052 558 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 PTPN11Q06124 597 aaPredicted RBP11.14□□□□□ -0.63
CLIC1-210ENST00000616760 ARHGAP1Q07960 439 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 APOBRQ0VD83 1088 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 STK3Q13188 491 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 CLN3Q13286 438 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 LAMC2Q13753 1193 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 PGM5Q15124 567 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 LY6KQ17RY6 165 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 MAP7D1Q3KQU3 841 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 VSIG10LQ86VR7 867 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 SGMS1Q86VZ5 419 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 DHX37Q8IY37 1157 aaKnown RBP11.14□□□□□ -0.63
CLIC1-210ENST00000616760 CCDC155Q8N6L0 562 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 RETREG2Q8NC44 543 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 PHOSPHO2Q8TCD6 241 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 AFG1LQ8WV93 481 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 ANP32BQ92688 251 aaKnown RBP11.14□□□□□ -0.63
CLIC1-210ENST00000616760 SCLYQ96I15 445 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 ZNF396Q96N95 335 aaPredicted RBP11.14□□□□□ -0.63
CLIC1-210ENST00000616760 LMBRD1Q9NUN5 540 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 DDX41Q9UJV9 622 aaKnown RBP11.14□□□□□ -0.63
CLIC1-210ENST00000616760 MTMR6Q9Y217 621 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 NOD1Q9Y239 953 aa11.14□□□□□ -0.63
CLIC1-210ENST00000616760 KLF18A0A0U1RQI7 1052 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 GOLGA6L4A6NEF3 574 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 POM121CA8CG34 1229 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 GOLGA8BA8MQT2 603 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 ZBTB43O43298 467 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 WIPF1O43516 503 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 STAM2O75886 525 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 BAIAP3O94812 1187 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 PLEKHA8P1O95397 391 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 LARGE1O95461 756 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 CA3P07451 260 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 MMP3P08254 477 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 TGFB3P10600 412 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 CYP2C9P11712 490 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 POU3F3P20264 500 aaPredicted RBP11.13□□□□□ -0.63
CLIC1-210ENST00000616760 MRE11P49959 708 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 CHMP4BP1P59074 171 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 UBE2HP62256 183 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 SCRN1Q12765 414 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 BFSP2Q13515 415 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 PKP1Q13835 747 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 TRIM29Q14134 588 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 DGKDQ16760 1214 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 GNPTABQ3T906 1256 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 OXLD1Q5BKU9 147 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 LYSMD3Q7Z3D4 306 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 DEFB128Q7Z7B8 93 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 MICU3Q86XE3 530 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 SRBD1Q8N5C6 995 aaKnown RBP11.13□□□□□ -0.63
CLIC1-210ENST00000616760 FANCBQ8NB91 859 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 PLPP7Q8NBV4 271 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 PPTC7Q8NI37 304 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 TCEANC2Q96MN5 208 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 LRRC2Q9BYS8 371 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 TRMT13Q9NUP7 481 aaKnown RBP11.13□□□□□ -0.63
CLIC1-210ENST00000616760 RBM28Q9NW13 759 aaKnown RBP11.13□□□□□ -0.63
CLIC1-210ENST00000616760 COG5Q9UP83 839 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 SIP14410 1827 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 PRRC2BQ5JSZ5 2229 aaKnown RBP11.13□□□□□ -0.63
CLIC1-210ENST00000616760 BDP1A6H8Y1 2624 aa11.13□□□□□ -0.63
CLIC1-210ENST00000616760 MUC3AQ02505 3323 aa11.12□□□□□ -0.63
CLIC1-210ENST00000616760 MYH7BA7E2Y1 1941 aa11.12□□□□□ -0.63
CLIC1-210ENST00000616760 SLC35F4A4IF30 521 aa11.12□□□□□ -0.63
CLIC1-210ENST00000616760 RXRAP19793 462 aa11.12□□□□□ -0.63
CLIC1-210ENST00000616760 METAP2P50579 478 aaKnown RBP eCLIP11.12□□□□□ -0.633e-7■□□□□ 10.1
CLIC1-210ENST00000616760 XRRA1Q6P2D8 792 aa11.12□□□□□ -0.63
CLIC1-210ENST00000616760 TMTC3Q6ZXV5 915 aa11.12□□□□□ -0.63
CLIC1-210ENST00000616760 TRIM22Q8IYM9 498 aa11.12□□□□□ -0.63
CLIC1-210ENST00000616760 IL31RAQ8NI17 732 aa11.12□□□□□ -0.63
CLIC1-210ENST00000616760 KATNAL1Q9BW62 490 aa11.12□□□□□ -0.63
CLIC1-210ENST00000616760 FTOQ9C0B1 505 aaKnown RBP eCLIP11.12□□□□□ -0.633e-52■□□□□ 9.4
CLIC1-210ENST00000616760 FRMPD4Q14CM0 1322 aa11.11□□□□□ -0.63
CLIC1-210ENST00000616760 TRANK1O15050 2925 aa11.11□□□□□ -0.63
CLIC1-210ENST00000616760 PIK3CDO00329 1044 aa11.11□□□□□ -0.63
CLIC1-210ENST00000616760 PARNO95453 639 aaKnown RBP11.11□□□□□ -0.63
CLIC1-210ENST00000616760 GGPS1O95749 300 aa11.11□□□□□ -0.63
CLIC1-210ENST00000616760 IQCF3P0C7M6 154 aa11.11□□□□□ -0.63
CLIC1-210ENST00000616760 VSIG8P0DPA2 414 aa11.11□□□□□ -0.63
CLIC1-210ENST00000616760 MYOGP15173 224 aa11.11□□□□□ -0.63
CLIC1-210ENST00000616760 KCNJ6P48051 423 aa11.11□□□□□ -0.63
CLIC1-210ENST00000616760 RTN1Q16799 776 aa11.11□□□□□ -0.63
CLIC1-210ENST00000616760 CELF3Q5SZQ8 465 aaKnown RBP11.11□□□□□ -0.63
CLIC1-210ENST00000616760 APOA5Q6Q788 366 aa11.11□□□□□ -0.63
CLIC1-210ENST00000616760 PRICKLE2Q7Z3G6 844 aa11.11□□□□□ -0.63
CLIC1-210ENST00000616760 RAB11FIP4Q86YS3 637 aa11.11□□□□□ -0.63
CLIC1-210ENST00000616760 NSUN7Q8NE18 718 aaKnown RBP11.11□□□□□ -0.63
CLIC1-210ENST00000616760 CAGE1Q8TC20 777 aa11.11□□□□□ -0.63
CLIC1-210ENST00000616760 FOXD4L4Q8WXT5 416 aaPredicted RBP11.11□□□□□ -0.63
CLIC1-210ENST00000616760 SPATA33Q96N06 139 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms