RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 FAM178BQ8IXR5 827 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 SP8Q8IXZ3 490 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 MICALL2Q8IY33 904 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 FAM186BQ8IYM0 893 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 ADGRF4Q8IZF3 695 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 SYNE4Q8N205 404 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 STAG2Q8N3U4 1231 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 ANKRD13CQ8N6S4 541 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 CEP120Q8N960 986 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 SYT2Q8N9I0 419 aaPredicted RBP2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 CCDC63Q8NA47 563 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 NOA1Q8NC60 698 aaKnown RBP2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 SUPT20HQ8NEM7 779 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 ARMC2Q8NEN0 867 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 ATL2Q8NHH9 583 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 SLC35G2Q8TBE7 412 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 CCDC110Q8TBZ0 833 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 NEK9Q8TD19 979 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 FBF1Q8TES7 1133 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 FBXO41Q8TF61 875 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 ZNF473Q8WTR7 871 aaKnown RBP2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 U2AF1L4Q8WU68 220 aaKnown RBP2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 SCFD2Q8WU76 684 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 DCAF4Q8WV16 495 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 TCP11Q8WWU5 503 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 SREK1Q8WXA9 508 aaKnown RBP2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 GPKOWQ92917 476 aaPredicted RBP eCLIP2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 TNFRSF25Q93038 417 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 HPS3Q969F9 1004 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 SEC16BQ96JE7 1060 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 CFAP57Q96MR6 1250 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 TTC25Q96NG3 672 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 SERPINB12Q96P63 405 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 DCBLD2Q96PD2 775 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 ZIM3Q96PE6 472 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 PURBQ96QR8 312 aaKnown RBP2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 ACCSQ96QU6 501 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 PIGSQ96S52 555 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 FMO2Q99518 471 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 MPHOSPH6Q99547 160 aaKnown RBP2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 AGPAT1Q99943 283 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 DUSP9Q99956 384 aaKnown RBP2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 SH3GL2Q99962 352 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 SELENOSQ9BQE4 189 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 JPH2Q9BR39 696 aaPredicted RBP2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 RIOK1Q9BRS2 568 aaKnown RBP2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 ERP44Q9BS26 406 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 MKNK1Q9BUB5 465 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 POLR3CQ9BUI4 534 aaPredicted RBP2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 PITPNM3Q9BZ71 974 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 PHACTR1Q9C0D0 580 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 COA1Q9GZY4 146 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 UBA5Q9GZZ9 404 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 MIS12Q9H081 205 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 NBPF3Q9H094 633 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 CARD9Q9H257 536 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 PABPC3Q9H361 631 aaKnown RBP2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 IFT122Q9HBG6 1241 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 SENP2Q9HC62 589 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 KIAA1586Q9HCI6 787 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 EPB41L4AQ9HCS5 686 aaPredicted RBP2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 TUFT1Q9NNX1 390 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 UBN1Q9NPG3 1134 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 USP40Q9NVE5 1235 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 INTS13Q9NVM9 706 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 TFCP2L1Q9NZI6 479 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 TBC1D7Q9P0N9 293 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 SENP1Q9P0U3 644 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 ARHGAP20Q9P2F6 1191 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 PI4KBQ9UBF8 816 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 BAIAP2L1Q9UHR4 511 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 SERPINB13Q9UIV8 391 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 ANAPC5Q9UJX4 755 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 NAGPAQ9UK23 515 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 TTC7AQ9ULT0 858 aaPredicted RBP2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 SYNPO2Q9UMS6 1093 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 NOVA2Q9UNW9 492 aaKnown RBP2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 TRAF3IP3Q9Y228 551 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 ZBTB1Q9Y2K1 713 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 ATP8A1Q9Y2Q0 1164 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 MRPL11Q9Y3B7 192 aaKnown RBP2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 SAMM50Q9Y512 469 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 PCDHGC5Q9Y5F6 944 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 ZHX2Q9Y6X8 837 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 KIF13BQ9NQT8 1826 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 COL18A1P39060 1754 aa2.23□□□□□ -2.05
RNU1-40P-201ENST00000516816 ARAP2Q8WZ64 1704 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 TRPM3Q9HCF6 1732 aaPredicted RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 UBE4BO95155 1302 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 MYO3BQ8WXR4 1341 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 ECM29Q5VYK3 1845 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 CYP3A7-CYP3A51PA0A087WV96 503 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 A0A087X0B3 334 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 A0A087X0T9 212 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 LRRD1A4D1F6 860 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 ARHGEF35A5YM69 484 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 USP17L3A6NCW0 530 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 USP17L4A6NCW7 530 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 C19orf67A6NJJ6 358 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms