RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-208ENST00000474839 PRMT1Q99873 361 aaKnown RBP13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 PAIP2Q9BPZ3 127 aaKnown RBP13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 JMJD4Q9H9V9 463 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 RGL1Q9NZL6 768 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 PKD2L1Q9P0L9 805 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 DNM3Q9UQ16 869 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 DAAM1Q9Y4D1 1078 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 COL4A1P02462 1669 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 TRAPPC3O43617 180 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 SMTNP53814 917 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 MAP2K1Q02750 393 aaPredicted RBP13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 NEDD9Q14511 834 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 DENND2CQ68D51 928 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 FUKQ8N0W3 1084 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 MYCT1Q8N699 235 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 CTTNBP2NLQ9P2B4 639 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 TPX2Q9ULW0 747 aaKnown RBP13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 G3V3G9 751 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 ZBTB39O15060 712 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 GNA14O95837 355 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 PLCG2P16885 1265 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 TNFAIP3P21580 790 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 KCNJ1P48048 391 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 PDIA5Q14554 519 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 UBAP2Q5T6F2 1119 aaKnown RBP13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 DCAF8Q5TAQ9 597 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 TPH2Q8IWU9 490 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 CEP120Q8N960 986 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 ELMO3Q96BJ8 720 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 REEP2Q9BRK0 252 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 SLC24A3Q9HC58 644 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 L3MBTL1Q9Y468 752 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 COL14A1Q05707 1796 aaKnown RBP13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 NMT1P30419 496 aaKnown RBP13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 SLC29A2Q14542 456 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 ANKRD20A8PQ5CZ79 823 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 ANKS4BQ8N8V4 417 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 NT5C3AQ9H0P0 336 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 INTS9Q9NV88 658 aaKnown RBP13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 SAMD15Q9P1V8 674 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 DDX3XO00571 662 aaKnown RBP eCLIP13.11□□□□□ -0.314e-6■■□□□ 13.7
SKIV2L-208ENST00000474839 EVI5O60447 810 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 PPP1R11O60927 126 aaPredicted RBP13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 TNFRSF8P28908 595 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 ECHS1P30084 290 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 RBM5P52756 815 aaKnown RBP eCLIP13.11□□□□□ -0.312e-6■■■■□ 26.1
SKIV2L-208ENST00000474839 MTMR3Q13615 1198 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 CTTNQ14247 550 aaKnown RBP13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 MESDQ14696 234 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 TRIP13Q15645 432 aaPredicted RBP13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 SHROOM1Q2M3G4 852 aaPredicted RBP13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 TMC3Q7Z5M5 1100 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 CCDC197Q8NCU1 140 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 GDAP1Q8TB36 358 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 FBXO25Q8TCJ0 367 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 RUBCNQ92622 972 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 MRRFQ96E11 262 aaKnown RBP13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 GANQ9H2C0 597 aa13.11□□□□□ -0.31
SKIV2L-208ENST00000474839 GOLGA6L10A0A0M3HER8 536 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 EDIL3O43854 480 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 SNX1Q13596 522 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 KNOP1Q1ED39 458 aaKnown RBP13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 CCDC105Q8IYK2 499 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 KIF2BQ8N4N8 673 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 SCFD2Q8WU76 684 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 RPGRQ92834 1020 aaKnown RBP13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 C18orf8Q96DM3 657 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 CHMP6Q96FZ7 201 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 CEP63Q96MT8 703 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 EDEM3Q9BZQ6 932 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 VEZTQ9HBM0 779 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 ERVK-5Q9HDB9 667 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 MTMR4Q9NYA4 1195 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 TAS2R14Q9NYV8 317 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 AIPL1Q9NZN9 384 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 TBK1Q9UHD2 729 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 DDX60Q8IY21 1712 aaKnown RBP13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 ATMINO43313 823 aaPredicted RBP13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 NEBLO76041 1014 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 ACSL3O95573 720 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 NR3C1P04150 777 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 COG2Q14746 738 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 ZCWPW2Q504Y3 356 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 CATSPER3Q86XQ3 398 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 LRRC34Q8IZ02 419 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 SYCP3Q8IZU3 236 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 CYP2W1Q8TAV3 490 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 EPS8L3Q8TE67 593 aaKnown RBP13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 SH2D3AQ9BRG2 576 aa13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 DHX36Q9H2U1 1008 aaKnown RBP13.1□□□□□ -0.31
SKIV2L-208ENST00000474839 F8VZ95 297 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 RBAK-RBAKDNI3L0D1 243 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 MYO1EQ12965 1108 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 BIRC3Q13489 604 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 DRAP1Q14919 205 aaPredicted RBP13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 TMEM132AQ24JP5 1023 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 C16orf86Q6ZW13 317 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 CCDC63Q8NA47 563 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 ARHGEF1Q92888 912 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms