RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 UBN1Q9NPG3 1134 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SH3BP1Q9Y3L3 701 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 TMEM247A6NEH6 219 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 B4E1Z4 1266 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 TMEM232C9JQI7 657 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CHMP2AO43633 222 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MAGEC1O60732 1142 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 TMCC1O94876 653 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 URODP06132 367 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 PSMA3P25788 255 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 KPNA2P52292 529 aaKnown RBP6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ZBTB16Q05516 673 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SCRN1Q12765 414 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 RASA3Q14644 834 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 PPP1R7Q15435 360 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 INTS8Q75QN2 995 aaKnown RBP6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SESTD1Q86VW0 696 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MAP7D3Q8IWC1 876 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SIX6OS1Q8N1H7 587 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ZSCAN1Q8NBB4 408 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 NELFBQ8WX92 580 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CCDC51Q96ER9 411 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MMS19Q96T76 1030 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 NUP58Q9BVL2 599 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 BLZF1Q9H2G9 400 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SUGCTQ9HAC7 445 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 STK38LQ9Y2H1 464 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 E7EWF7 191 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 PFKFB2O60825 505 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 NDUFS2O75306 463 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ERN1O75460 977 aaKnown RBP6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SRGNP10124 158 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CMA1P23946 247 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ERCC5P28715 1186 aaPredicted RBP6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 NFX1Q12986 1120 aaKnown RBP6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 IFT88Q13099 833 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CASP8Q14790 479 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 FAM102BQ5T8I3 360 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 DIS3L2Q8IYB7 885 aaKnown RBP6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 GPC2Q8N158 579 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 BBOF1Q8ND07 529 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CLIC6Q96NY7 704 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ELP3Q9H9T3 547 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 LRRC4Q9HBW1 653 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MAN1C1Q9NR34 630 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 AATFQ9NY61 560 aaKnown RBP eCLIP6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 STAP2Q9UGK3 403 aa6.74□□□□□ -1.33
HLA-DQA1-205ENST00000460633 PPFIA4O75335 1185 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CYP2C19P33261 490 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 OXCT1P55809 520 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 POLA2Q14181 598 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 PTK2BQ14289 1009 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CFAP221Q4G0U5 840 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SYDE2Q5VT97 1194 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MMS22LQ6ZRQ5 1243 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CACNA2D3Q8IZS8 1091 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CHST13Q8NET6 341 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SCFD1Q8WVM8 642 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 TEKT4Q8WW24 435 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 GPR101Q96P66 508 aaPredicted RBP6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 POP1Q99575 1024 aaKnown RBP6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MRIQ9BWK5 157 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MTRF1LQ9UGC7 380 aaKnown RBP6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 USH1CQ9Y6N9 552 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 C10orf71Q711Q0 1435 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 PAPPAQ13219 1627 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ADCY9O60503 1353 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 GOLGA8JA6NMD2 632 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CETN3O15182 167 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MAGEB2O15479 319 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 NCK2O43639 380 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 DDAH1O94760 285 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 GAP43P17677 238 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SLC8A1P32418 973 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 TIMM10P62072 90 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 UBE3CQ15386 1083 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 HLFQ16534 295 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 USH1GQ495M9 461 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 TWF2Q6IBS0 349 aaKnown RBP6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MIGA1Q8NAN2 632 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 DPF2Q92785 391 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 WNK4Q96J92 1243 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MYL10Q9BUA6 226 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 RGS17Q9UGC6 210 aaPredicted RBP6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CYP2E1P05181 493 aaPredicted RBP6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 VCLP18206 1134 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SCNN1DP51172 638 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 KPNA1P52294 538 aaPredicted RBP6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 RNF207Q6ZRF8 634 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SAMD7Q7Z3H4 446 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ERO1BQ86YB8 467 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SRRM1Q8IYB3 904 aaKnown RBP6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 REXO1Q8N1G1 1221 aaKnown RBP6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CSGALNACT2Q8N6G5 542 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 APPL2Q8NEU8 664 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 NEK9Q8TD19 979 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 TRIM11Q96F44 468 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 KCNJ14Q9UNX9 436 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 UTP11Q9Y3A2 253 aaKnown RBP6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 COL1A1P02452 1464 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms