RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 C4orf19Q8IY42 314 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 CCDC155Q8N6L0 562 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 IGSF22Q8N9C0 903 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 PCYT2Q99447 389 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 POLR3CQ9BUI4 534 aaPredicted RBP9.76□□□□□ -0.85
COL28A1-205ENST00000453441 GABBR1Q9UBS5 961 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 LRWD1Q9UFC0 647 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 NR2E3Q9Y5X4 410 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 LOXHD1Q8IVV2 1947 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 C17orf102A2RUQ5 167 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 CAND2O75155 1236 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 PPP6R2O75170 966 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 DXOO77932 396 aaKnown RBP9.75□□□□□ -0.85
COL28A1-205ENST00000453441 RPA1P27694 616 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 TECP42680 631 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 PSMC6P62333 389 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 KRT85P78386 507 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 PRKCEQ02156 737 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 PPFIA1Q13136 1202 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 PLCB4Q15147 1175 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 STK38Q15208 465 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 PTPAQ15257 358 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 LRRC26Q2I0M4 334 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 FAM47CQ5HY64 1035 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 TAF2Q6P1X5 1199 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 FAM43BQ6ZT52 329 aaPredicted RBP9.75□□□□□ -0.85
COL28A1-205ENST00000453441 OTUD6AQ7L8S5 288 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 TRIM50Q86XT4 487 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 FAM126BQ8IXS8 530 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 CKAP2LQ8IYA6 745 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 KCNG4Q8TDN1 519 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 IPO9Q96P70 1041 aaKnown RBP9.75□□□□□ -0.85
COL28A1-205ENST00000453441 USP28Q96RU2 1077 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 HSD17B14Q9BPX1 270 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 JPH2Q9BR39 696 aaPredicted RBP9.75□□□□□ -0.85
COL28A1-205ENST00000453441 NT5C3AQ9H0P0 336 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 PRDM9Q9NQV7 894 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 CHMP5Q9NZZ3 219 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 PRKAG2Q9UGJ0 569 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 NOD1Q9Y239 953 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 FCF1Q9Y324 198 aaKnown RBP9.75□□□□□ -0.85
COL28A1-205ENST00000453441 GRIN2DO15399 1336 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 KDM3AQ9Y4C1 1321 aa9.75□□□□□ -0.85
COL28A1-205ENST00000453441 PDE4DIPQ5VU43 2346 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 EML1O00423 815 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 MAGEB2O15479 319 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 PQBP1O60828 265 aaKnown RBP9.74□□□□□ -0.85
COL28A1-205ENST00000453441 PARNO95453 639 aaKnown RBP9.74□□□□□ -0.85
COL28A1-205ENST00000453441 CD4P01730 458 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 CLTBP09497 229 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 SMIM10L2AP0DMW4 78 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 SMIM10L2BP0DMW5 78 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 TXLNAP40222 546 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 RPIAP49247 311 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 MLLT1Q03111 559 aaPredicted RBP9.74□□□□□ -0.85
COL28A1-205ENST00000453441 TLE2Q04725 743 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 PTK7Q13308 1070 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 BFSP2Q13515 415 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 PKP1Q13835 747 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 GRIK4Q16099 956 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 PTGISQ16647 500 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 TRIM60Q495X7 471 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 LINC00301Q8NCQ3 95 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 CAGE1Q8TC20 777 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 SYMPKQ92797 1274 aaKnown RBP9.74□□□□□ -0.85
COL28A1-205ENST00000453441 GJA10Q969M2 543 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 NACC1Q96RE7 527 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 UIMC1Q96RL1 719 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 EIF2AK1Q9BQI3 630 aaKnown RBP9.74□□□□□ -0.85
COL28A1-205ENST00000453441 LXNQ9BS40 222 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 NIFKQ9BYG3 293 aaKnown RBP9.74□□□□□ -0.85
COL28A1-205ENST00000453441 SCAND2PQ9GZW5 306 aaPredicted RBP9.74□□□□□ -0.85
COL28A1-205ENST00000453441 KDM4CQ9H3R0 1056 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 ANKEF1Q9NU02 776 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 HDAC6Q9UBN7 1215 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 ATP11BQ9Y2G3 1177 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 ZDHHC9Q9Y397 364 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 SRPRBQ9Y5M8 271 aaKnown RBP9.74□□□□□ -0.85
COL28A1-205ENST00000453441 CLIC4Q9Y696 253 aa9.74□□□□□ -0.85
COL28A1-205ENST00000453441 MBLAC1A4D2B0 266 aaPredicted RBP9.73□□□□□ -0.85
COL28A1-205ENST00000453441 VWA3AA6NCI4 1184 aa9.73□□□□□ -0.85
COL28A1-205ENST00000453441 KIAA0355O15063 1070 aa9.73□□□□□ -0.85
COL28A1-205ENST00000453441 SPTLC2O15270 562 aa9.73□□□□□ -0.85
COL28A1-205ENST00000453441 GAS2O43903 313 aaKnown RBP9.73□□□□□ -0.85
COL28A1-205ENST00000453441 SLITRK3O94933 977 aa9.73□□□□□ -0.85
COL28A1-205ENST00000453441 INSRRP14616 1297 aa9.73□□□□□ -0.85
COL28A1-205ENST00000453441 MARK3P27448 753 aa9.73□□□□□ -0.85
COL28A1-205ENST00000453441 RFC5P40937 340 aa9.73□□□□□ -0.85
COL28A1-205ENST00000453441 UBA7P41226 1012 aa9.73□□□□□ -0.85
COL28A1-205ENST00000453441 RBL2Q08999 1139 aa9.73□□□□□ -0.85
COL28A1-205ENST00000453441 LAPTM4AQ15012 233 aa9.73□□□□□ -0.85
COL28A1-205ENST00000453441 CSPP1Q1MSJ5 1256 aa9.73□□□□□ -0.85
COL28A1-205ENST00000453441 TUSC1Q2TAM9 212 aa9.73□□□□□ -0.85
COL28A1-205ENST00000453441 FAM173BQ6P4H8 233 aa9.73□□□□□ -0.85
COL28A1-205ENST00000453441 LIAT1Q6ZQX7 453 aa9.73□□□□□ -0.85
COL28A1-205ENST00000453441 RPAINQ86UA6 219 aa9.73□□□□□ -0.85
COL28A1-205ENST00000453441 RSPH3Q86UC2 560 aa9.73□□□□□ -0.85
COL28A1-205ENST00000453441 SERINC5Q86VE9 423 aa9.73□□□□□ -0.85
COL28A1-205ENST00000453441 RETREG2Q8NC44 543 aa9.73□□□□□ -0.85
COL28A1-205ENST00000453441 BANK1Q8NDB2 785 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms