RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 Pcdh15Q99PJ1 1943 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Gimap9G3X987 291 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Bcat1P24288 386 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Cep112Q5PR68 954 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Atp13a4Q5XF90 1193 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Sestd1Q80UK0 696 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Btbd7Q8CFE5 1130 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Znf445Q8R2V3 986 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Bcs1lQ9CZP5 418 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 MafgO54790 162 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 PrkceP16054 737 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Ly9Q01965 654 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Dpcr1Q3TNW5 500 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Rufy4Q3TYX8 563 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Ddx3yQ62095 658 aaKnown RBP11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Sema4bQ62179 823 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Cep70Q6IQY5 616 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Ppp2r5aQ6PD03 486 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Cyfip1Q7TMB8 1253 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Tubb2aQ7TMM9 445 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Syne4Q8CII8 388 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Angel2Q8K1C0 544 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Uap1Q91YN5 522 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Asic2Q925H0 512 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Tubb2bQ9CWF2 445 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Fthl17aQ9DAX0 182 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Gm11549A0A286YD83 63 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Timm44O35857 452 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Mmp15O54732 657 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Tp53P02340 387 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Cbx2P30658 519 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Pafah1b1P63005 410 aaKnown RBP11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Actn1Q7TPR4 892 aaKnown RBP11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Zdhhc15Q8BGJ0 337 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Slc4a7Q8BTY2 1034 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Ppfibp1Q8C8U0 969 aaKnown RBP11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Stoml1Q8CI66 399 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Ddx39aQ8VDW0 427 aaKnown RBP11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Pcdhgc5Q91XW9 944 aa11.84□□□□□ -0.51
Lig3-210ENSMUST00000173347 Myh9Q8VDD5 1960 aaKnown RBP11.83□□□□□ -0.51
Lig3-210ENSMUST00000173347 Abcb11Q9QY30 1321 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Dicer1Q8R418 1916 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Irf8P23611 424 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Stat4P42228 749 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Adcy7P51829 1099 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Gtf2bP62915 316 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Edem3Q2HXL6 931 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Trappc3lQ4KL14 181 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 IgflQ6B9Z0 140 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Acad11Q80XL6 779 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Iqcb1Q8BP00 598 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 AW822073A0A0N4SUK1 652 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 ErmardE9Q048 622 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Sec31aQ3UPL0 1230 aaKnown RBP11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Tmem232Q5K6N0 675 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Cct6bQ61390 531 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Ncoa7Q6DFV7 943 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Cdc23Q8BGZ4 597 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Dbndd2Q9CRD4 158 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Q9CYI0 393 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 1700016G14RikA0A286YCZ6 238 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Dhtkd1A2ATU0 921 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Ccnd2P30280 289 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Actn4P57780 912 aaKnown RBP11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 SnrpfP62307 86 aaKnown RBP11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Kmt5aQ2YDW7 349 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Rapgef1Q3UHC1 1224 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 NntQ61941 1086 aaKnown RBP11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Ces1eQ64176 562 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Snd1Q78PY7 910 aaKnown RBP11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Ints8Q80V86 995 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Tnpo2Q99LG2 887 aaKnown RBP11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Vps33aQ9D2N9 598 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Grtp1Q9D3N8 359 aa11.83□□□□□ -0.52
Lig3-210ENSMUST00000173347 Celf5D3Z4T1 395 aaKnown RBP11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Heatr4E9Q357 955 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 B020004C17RikJ3QP07 232 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Sema4dO09126 861 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Tnfrsf11aO35305 625 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 SpibO35906 267 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Cd70O55237 195 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Nkx2-5P42582 318 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 LxnP70202 222 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Tarbp2P97473 365 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Adamts18Q4VC17 1219 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Dusp4Q8BFV3 398 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Odf2A3KGV1 830 aaKnown RBP11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Calb1P12658 261 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Ccnd3P30282 292 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Syt2P46097 422 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Oog4Q4G0C7 502 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Xpnpep1Q6P1B1 623 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Azin2Q8BVM4 459 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Mrpl58Q8R035 206 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Cbwd1Q8VEH6 393 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Creb3l3Q91XE9 479 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Mageb16Q9CWV4 363 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Prl2b1Q9DAZ2 228 aa11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 Rpf2Q9JJ80 306 aaKnown RBP11.82□□□□□ -0.52
Lig3-210ENSMUST00000173347 PhipQ8VDD9 1821 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms