RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 RRP45Q05636 305 aaKnown RBP0.59□□□□□ -2.31
snR49snR49 CLP1Q08685 445 aaPredicted RBP0.59□□□□□ -2.31
snR49snR49 PCL9Q12477 304 aa0.59□□□□□ -2.31
snR49snR49 COX3P00420 269 aa0.58□□□□□ -2.32
snR49snR49 ARG3P05150 338 aa0.58□□□□□ -2.32
snR49snR49 SHE1P38200 338 aa0.58□□□□□ -2.32
snR49snR49 OTU2P38747 307 aaKnown RBP0.58□□□□□ -2.32
snR49snR49 GPI16P38875 610 aa0.58□□□□□ -2.32
snR49snR49 SMF1P38925 575 aa0.58□□□□□ -2.32
snR49snR49 SED5Q01590 340 aa0.58□□□□□ -2.32
snR49snR49 DIS3Q08162 1001 aaKnown RBP0.58□□□□□ -2.32
snR49snR49 HMS1Q12398 434 aa0.58□□□□□ -2.32
snR49snR49 UNG1P12887 359 aa0.57□□□□□ -2.32
snR49snR49 CUP2P15315 225 aa0.57□□□□□ -2.32
snR49snR49 YKR032WP36127 104 aa0.57□□□□□ -2.32
snR49snR49 NTC20P38302 140 aaPredicted RBP0.57□□□□□ -2.32
snR49snR49 CIN2P46670 268 aa0.57□□□□□ -2.32
snR49snR49 YGL138CP53122 345 aa0.57□□□□□ -2.32
snR49snR49 YGR015CP53208 328 aa0.57□□□□□ -2.32
snR49snR49 YPL113CQ02961 396 aa0.57□□□□□ -2.32
snR49snR49 YOL029CQ08187 201 aa0.57□□□□□ -2.32
snR49snR49 STE2D6VTK4 431 aa0.56□□□□□ -2.32
snR49snR49 SRV2P17555 526 aaKnown RBP0.56□□□□□ -2.32
snR49snR49 TRX2P22803 104 aaKnown RBP0.56□□□□□ -2.32
snR49snR49 TIR2P33890 251 aa0.56□□□□□ -2.32
snR49snR49 MED6P38782 295 aa0.56□□□□□ -2.32
snR49snR49 VID27P40157 782 aa0.56□□□□□ -2.32
snR49snR49 YJR054WP47114 497 aa0.56□□□□□ -2.32
snR49snR49 TRM112P53738 135 aaPredicted RBP0.56□□□□□ -2.32
snR49snR49 FSH2Q05015 223 aa0.56□□□□□ -2.32
snR49snR49 ATP16Q12165 160 aa0.56□□□□□ -2.32
snR49snR49 HPR1P17629 752 aaKnown RBP0.55□□□□□ -2.32
snR49snR49 CPT1P17898 393 aa0.55□□□□□ -2.32
snR49snR49 LDS1P31379 325 aa0.55□□□□□ -2.32
snR49snR49 MCR1P36060 302 aaKnown RBP0.55□□□□□ -2.32
snR49snR49 YMR262WP38430 313 aa0.55□□□□□ -2.32
snR49snR49 PCL7P40186 285 aa0.55□□□□□ -2.32
snR49snR49 SHE4P51534 789 aa0.55□□□□□ -2.32
snR49snR49 CDH1P53197 566 aa0.55□□□□□ -2.32
snR49snR49 SMD1Q02260 146 aaPredicted RBP0.55□□□□□ -2.32
snR49snR49 API2Q04413 109 aa0.55□□□□□ -2.32
snR49snR49 MET2P08465 486 aa0.54□□□□□ -2.32
snR49snR49 CLB1P24868 471 aa0.54□□□□□ -2.32
snR49snR49 SMC2P38989 1170 aaKnown RBP0.54□□□□□ -2.32
snR49snR49 YER079WP40052 210 aaKnown RBP0.54□□□□□ -2.32
snR49snR49 MMF1P40185 145 aaKnown RBP0.54□□□□□ -2.32
snR49snR49 HSH155P49955 971 aaKnown RBP0.54□□□□□ -2.32
snR49snR49 PRM1P53835 661 aa0.54□□□□□ -2.32
snR49snR49 YDR131CQ03899 556 aa0.54□□□□□ -2.32
snR49snR49 GTO3Q04806 366 aa0.54□□□□□ -2.32
snR49snR49 TDH2P00358 332 aaKnown RBP0.53□□□□□ -2.32
snR49snR49 TDH3P00359 332 aaKnown RBP RIP-Chip data0.53□□□□□ -2.32not detected
snR49snR49 ADH3P07246 375 aaKnown RBP0.53□□□□□ -2.32
snR49snR49 URA4P20051 364 aa0.53□□□□□ -2.32
snR49snR49 GEP4P38812 185 aa0.53□□□□□ -2.32
snR49snR49 GGC1P38988 300 aa0.53□□□□□ -2.32
snR49snR49 TOS2P50078 622 aa0.53□□□□□ -2.32
snR49snR49 ROG1P53118 685 aa0.53□□□□□ -2.32
snR49snR49 RRN9P53437 365 aa0.53□□□□□ -2.32
snR49snR49 OCA2P53949 197 aa0.53□□□□□ -2.32
snR49snR49 TIM10P87108 93 aa0.53□□□□□ -2.32
snR49snR49 SKO1Q02100 647 aa0.53□□□□□ -2.32
snR49snR49 KAP120Q02932 1032 aa0.53□□□□□ -2.32
snR49snR49 APC4Q04601 652 aa0.53□□□□□ -2.32
snR49snR49 IMH1Q06704 911 aaKnown RBP0.53□□□□□ -2.32
snR49snR49 RLP24Q07915 199 aaKnown RBP0.53□□□□□ -2.32
snR49snR49 PRP46Q12417 451 aaPredicted RBP0.53□□□□□ -2.32
snR49snR49 DST1P07273 309 aa0.52□□□□□ -2.33
snR49snR49 KRE1P17260 313 aa0.52□□□□□ -2.33
snR49snR49 CLC1P17891 233 aa0.52□□□□□ -2.33
snR49snR49 ROX1P25042 368 aa0.52□□□□□ -2.33
snR49snR49 BRF1P29056 596 aa0.52□□□□□ -2.33
snR49snR49 COS9P36034 407 aa0.52□□□□□ -2.33
snR49snR49 ABM1P47146 123 aa0.52□□□□□ -2.33
snR49snR49 NAS6P50086 228 aa0.52□□□□□ -2.33
snR49snR49 YPL080CQ02826 108 aa0.52□□□□□ -2.33
snR49snR49 RPN9Q04062 393 aaKnown RBP0.52□□□□□ -2.33
snR49snR49 YOP1Q12402 180 aa0.52□□□□□ -2.33
snR49snR49 RTN2Q12443 393 aa0.52□□□□□ -2.33
snR49snR49 HEM4P06174 275 aa0.51□□□□□ -2.33
snR49snR49 DAL81P21657 970 aa0.51□□□□□ -2.33
snR49snR49 TIP20P33891 701 aa0.51□□□□□ -2.33
snR49snR49 STE24P47154 453 aa0.51□□□□□ -2.33
snR49snR49 GMC1Q04399 608 aa0.51□□□□□ -2.33
snR49snR49 YOL159C-AQ3E769 90 aa0.51□□□□□ -2.33
snR49snR49 MEX67Q99257 599 aaKnown RBP0.51□□□□□ -2.33
snR49snR49 MET17P06106 444 aa0.5□□□□□ -2.33
snR49snR49 ASP1P38986 381 aaPredicted RBP0.5□□□□□ -2.33
snR49snR49 ARF3P40994 183 aaRIP-Chip data0.5□□□□□ -2.33not detected
snR49snR49 CAK1P43568 368 aaPredicted RBP0.5□□□□□ -2.33
snR49snR49 PIB2P53191 635 aa0.5□□□□□ -2.33
snR49snR49 SLT2Q00772 484 aa0.5□□□□□ -2.33
snR49snR49 DCS1Q06151 350 aa0.5□□□□□ -2.33
snR49snR49 SAS3P34218 831 aa0.49□□□□□ -2.33
snR49snR49 YMR010WQ03687 405 aa0.49□□□□□ -2.33
snR49snR49 ARX1Q03862 593 aaKnown RBP0.49□□□□□ -2.33
snR49snR49 YDR222WQ04925 415 aa0.49□□□□□ -2.33
snR49snR49 VPS54Q12071 889 aa0.49□□□□□ -2.33
snR49snR49 YPR063CQ12160 140 aa0.49□□□□□ -2.33
snR49snR49 ARO3P14843 370 aaKnown RBP0.48□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms