RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C MRX4Q12467 430 aa5.67□□□□□ -1.5
VPS4YPR173C SKM1Q12469 655 aa5.67□□□□□ -1.5
VPS4YPR173C YHR213W-AQ8TGT4 77 aa5.67□□□□□ -1.5
VPS4YPR173C STE3P06783 470 aa5.66□□□□□ -1.5
VPS4YPR173C KGD2P19262 463 aaPredicted RBP5.66□□□□□ -1.5
VPS4YPR173C CAM1P29547 415 aaKnown RBP5.66□□□□□ -1.5
VPS4YPR173C GSH1P32477 678 aa5.66□□□□□ -1.5
VPS4YPR173C NDC1P32500 655 aa5.66□□□□□ -1.5
VPS4YPR173C YPT7P32939 208 aa5.66□□□□□ -1.5
VPS4YPR173C LST4P34239 828 aa5.66□□□□□ -1.5
VPS4YPR173C YKL107WP34251 309 aa5.66□□□□□ -1.5
VPS4YPR173C TSA1P34760 196 aaKnown RBP5.66□□□□□ -1.5
VPS4YPR173C PHO11P35842 467 aa5.66□□□□□ -1.5
VPS4YPR173C MRPL40P36534 297 aa5.66□□□□□ -1.5
VPS4YPR173C YBR071WP38243 211 aa5.66□□□□□ -1.5
VPS4YPR173C YBR137WP38276 179 aa5.66□□□□□ -1.5
VPS4YPR173C PHO12P38693 467 aa5.66□□□□□ -1.5
VPS4YPR173C RRP4P38792 359 aaKnown RBP5.66□□□□□ -1.5
VPS4YPR173C LSM12P38828 187 aaKnown RBP5.66□□□□□ -1.5
VPS4YPR173C GDI1P39958 451 aaKnown RBP5.66□□□□□ -1.5
VPS4YPR173C ZRG8P40021 1076 aa5.66□□□□□ -1.5
VPS4YPR173C LAS21P40367 830 aa5.66□□□□□ -1.5
VPS4YPR173C ERG10P41338 398 aaKnown RBP5.66□□□□□ -1.5
VPS4YPR173C YGR201CP42936 225 aa5.66□□□□□ -1.5
VPS4YPR173C YFR018CP43599 363 aa5.66□□□□□ -1.5
VPS4YPR173C CHA4P43634 648 aa5.66□□□□□ -1.5
VPS4YPR173C UBC12P52491 188 aa5.66□□□□□ -1.5
VPS4YPR173C YNL260CP53846 198 aa5.66□□□□□ -1.5
VPS4YPR173C YNL140CP53910 189 aa5.66□□□□□ -1.5
VPS4YPR173C GCN5Q03330 439 aa5.66□□□□□ -1.5
VPS4YPR173C IRC10Q08118 586 aa5.66□□□□□ -1.5
VPS4YPR173C CLP1Q08685 445 aaPredicted RBP5.66□□□□□ -1.5
VPS4YPR173C YTM1Q12024 460 aaPredicted RBP5.66□□□□□ -1.5
VPS4YPR173C DIN7Q12086 430 aa5.66□□□□□ -1.5
VPS4YPR173C RRP42Q12277 265 aaPredicted RBP5.66□□□□□ -1.5
VPS4YPR173C MTR10Q99189 972 aa5.66□□□□□ -1.5
VPS4YPR173C YEL009C-AA0A023PZF2 135 aa5.65□□□□□ -1.51
VPS4YPR173C YBR085C-AO43137 85 aa5.65□□□□□ -1.51
VPS4YPR173C PHO5P00635 467 aa5.65□□□□□ -1.51
VPS4YPR173C RAD52P06778 471 aaKnown RBP5.65□□□□□ -1.51
VPS4YPR173C FUM1P08417 488 aaKnown RBP5.65□□□□□ -1.51
VPS4YPR173C MET2P08465 486 aa5.65□□□□□ -1.51
VPS4YPR173C YAR066WP0CX18 203 aa5.65□□□□□ -1.51
VPS4YPR173C YHR214WP0CX19 203 aa5.65□□□□□ -1.51
VPS4YPR173C SST2P11972 698 aaKnown RBP5.65□□□□□ -1.51
VPS4YPR173C DAL81P21657 970 aa5.65□□□□□ -1.51
VPS4YPR173C CAT2P32796 670 aaKnown RBP5.65□□□□□ -1.51
VPS4YPR173C PDR3P33200 976 aa5.65□□□□□ -1.51
VPS4YPR173C PRP18P33411 251 aaPredicted RBP5.65□□□□□ -1.51
VPS4YPR173C YPT52P36018 234 aaKnown RBP5.65□□□□□ -1.51
VPS4YPR173C ALY1P36117 915 aa5.65□□□□□ -1.51
VPS4YPR173C HMT1P38074 348 aa5.65□□□□□ -1.51
VPS4YPR173C SIF2P38262 535 aa5.65□□□□□ -1.51
VPS4YPR173C RRF1P38771 230 aa5.65□□□□□ -1.51
VPS4YPR173C TAT2P38967 592 aa5.65□□□□□ -1.51
VPS4YPR173C PTI1P39927 425 aaPredicted RBP5.65□□□□□ -1.51
VPS4YPR173C AIM10P39965 576 aaKnown RBP5.65□□□□□ -1.51
VPS4YPR173C RPS12P48589 143 aaKnown RBP5.65□□□□□ -1.51
VPS4YPR173C POP6P53218 158 aa5.65□□□□□ -1.51
VPS4YPR173C ERV29P53337 310 aa5.65□□□□□ -1.51
VPS4YPR173C HXT11P54862 567 aa5.65□□□□□ -1.51
VPS4YPR173C YSA1Q01976 231 aa5.65□□□□□ -1.51
VPS4YPR173C RPL6AQ02326 176 aaKnown RBP5.65□□□□□ -1.51
VPS4YPR173C YPL068CQ02749 293 aa5.65□□□□□ -1.51
VPS4YPR173C SNZ1Q03148 297 aa5.65□□□□□ -1.51
VPS4YPR173C RPN4Q03465 531 aa5.65□□□□□ -1.51
VPS4YPR173C SCS7Q03529 384 aa5.65□□□□□ -1.51
VPS4YPR173C YDR249CQ03787 373 aa5.65□□□□□ -1.51
VPS4YPR173C TPP1Q03796 238 aa5.65□□□□□ -1.51
VPS4YPR173C YLR224WQ05947 369 aa5.65□□□□□ -1.51
VPS4YPR173C BUR2Q05949 395 aa5.65□□□□□ -1.51
VPS4YPR173C PDR8Q06149 701 aa5.65□□□□□ -1.51
VPS4YPR173C ARV1Q06541 321 aa5.65□□□□□ -1.51
VPS4YPR173C SYC1Q08553 188 aaPredicted RBP5.65□□□□□ -1.51
VPS4YPR173C LEA1Q08963 238 aaPredicted RBP5.65□□□□□ -1.51
VPS4YPR173C NMD4Q12129 218 aa5.65□□□□□ -1.51
VPS4YPR173C YPL245WQ12179 454 aaKnown RBP5.65□□□□□ -1.51
VPS4YPR173C YOL107WQ12239 342 aa5.65□□□□□ -1.51
VPS4YPR173C PEX11Q12462 236 aa5.65□□□□□ -1.51
VPS4YPR173C MRP2P10663 115 aaPredicted RBP5.64□□□□□ -1.51
VPS4YPR173C MER1P16523 270 aa5.64□□□□□ -1.51
VPS4YPR173C PET9P18239 318 aaKnown RBP5.64□□□□□ -1.51
VPS4YPR173C PHO80P20052 293 aa5.64□□□□□ -1.51
VPS4YPR173C RPS1BP23248 255 aaKnown RBP5.64□□□□□ -1.51
VPS4YPR173C SLM5P25345 492 aaKnown RBP5.64□□□□□ -1.51
VPS4YPR173C SNC1P31109 117 aa5.64□□□□□ -1.51
VPS4YPR173C HOM6P31116 359 aaKnown RBP5.64□□□□□ -1.51
VPS4YPR173C VPH1P32563 840 aaKnown RBP5.64□□□□□ -1.51
VPS4YPR173C PET127P32606 800 aa5.64□□□□□ -1.51
VPS4YPR173C SPO23P33757 523 aa5.64□□□□□ -1.51
VPS4YPR173C YBR184WP38299 523 aa5.64□□□□□ -1.51
VPS4YPR173C GRE3P38715 327 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
VPS4YPR173C YHR035WP38769 630 aa5.64□□□□□ -1.51
VPS4YPR173C HPA3P39979 161 aa5.64□□□□□ -1.51
VPS4YPR173C RTT105P40063 208 aa5.64□□□□□ -1.51
VPS4YPR173C UFE1P41834 346 aa5.64□□□□□ -1.51
VPS4YPR173C TIM54P47045 478 aa5.64□□□□□ -1.51
VPS4YPR173C YJL043WP47053 257 aa5.64□□□□□ -1.51
VPS4YPR173C AMA1P50082 593 aa5.64□□□□□ -1.51
VPS4YPR173C IMO32P53219 342 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 51.7 ms