RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	KTR2	P33550	425 aa		4.66	□□□□□ -1.66
PXA1	YPL147W	SOF1	P33750	489 aa	Known RBP	4.66	□□□□□ -1.66
PXA1	YPL147W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	RIP-Chip
PXA1	YPL147W	SKT5	P34226	696 aa		4.66	□□□□□ -1.66
PXA1	YPL147W	CST26	P38226	397 aa		4.66	□□□□□ -1.66
PXA1	YPL147W	ELO3	P40319	345 aa		4.66	□□□□□ -1.66
PXA1	YPL147W	SER33	P40510	469 aa		4.66	□□□□□ -1.66
PXA1	YPL147W	IME4	P41833	600 aa		4.66	□□□□□ -1.66
PXA1	YPL147W	NBP1	P52919	319 aa	Predicted RBP	4.66	□□□□□ -1.66
PXA1	YPL147W	SWC4	P53201	476 aa		4.66	□□□□□ -1.66
PXA1	YPL147W	COG5	P53951	403 aa		4.66	□□□□□ -1.66
PXA1	YPL147W	VHS1	Q03785	461 aa		4.66	□□□□□ -1.66
PXA1	YPL147W	CSN9	Q03981	162 aa		4.66	□□□□□ -1.66
PXA1	YPL147W	XYL2	Q07993	356 aa		4.66	□□□□□ -1.66
PXA1	YPL147W	HRD1	Q08109	551 aa		4.66	□□□□□ -1.66
PXA1	YPL147W	SLF1	Q12034	447 aa	Known RBP	4.66	□□□□□ -1.66
PXA1	YPL147W	PKH2	Q12236	1081 aa	Known RBP	4.66	□□□□□ -1.66
PXA1	YPL147W	MOD5	P07884	428 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	URA6	P15700	204 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	DAL2	P25335	343 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	PMT2	P31382	759 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	ECT1	P33412	323 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	PTC1	P35182	281 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	OAF3	P36023	863 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	TVP38	P36164	337 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	ZTA1	P38230	334 aa	Known RBP	4.65	□□□□□ -1.66
PXA1	YPL147W	EFM1	P38732	585 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	YHR210C	P38893	341 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	GPB2	P39717	880 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	EXO1	P39875	702 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	RRG9	P40156	214 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	YNL194C	P40169	301 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	IDP2	P41939	412 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	YJR030C	P47101	745 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	GTR2	P53290	341 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	YPR078C	Q06813	372 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	GPB1	Q08886	897 aa		4.65	□□□□□ -1.66
PXA1	YPL147W	RPP0	P05317	312 aa	Known RBP	4.65	□□□□□ -1.67
PXA1	YPL147W	HIP1	P06775	603 aa		4.65	□□□□□ -1.67
PXA1	YPL147W	MRP2	P10663	115 aa	Predicted RBP	4.65	□□□□□ -1.67
PXA1	YPL147W	NAM2	P11325	894 aa		4.65	□□□□□ -1.67
PXA1	YPL147W	TRK1	P12685	1235 aa		4.65	□□□□□ -1.67
PXA1	YPL147W	ART10	P18634	518 aa	Known RBP	4.65	□□□□□ -1.67
PXA1	YPL147W	RPB8	P20436	146 aa		4.65	□□□□□ -1.67
PXA1	YPL147W	TIP20	P33891	701 aa		4.65	□□□□□ -1.67
PXA1	YPL147W	ADD66	P36040	267 aa		4.65	□□□□□ -1.67
PXA1	YPL147W	MRPL15	P36523	253 aa		4.65	□□□□□ -1.67
PXA1	YPL147W	YJL206C	P39529	758 aa		4.65	□□□□□ -1.67
PXA1	YPL147W	YER130C	P39959	443 aa		4.65	□□□□□ -1.67
PXA1	YPL147W	PRK1	P40494	810 aa		4.65	□□□□□ -1.67
PXA1	YPL147W	PAC11	P40960	533 aa		4.65	□□□□□ -1.67
PXA1	YPL147W	ATG4	P53867	494 aa		4.65	□□□□□ -1.67
PXA1	YPL147W	ATG21	Q02887	496 aa		4.65	□□□□□ -1.67
PXA1	YPL147W	TRS31	Q03337	283 aa		4.65	□□□□□ -1.67
PXA1	YPL147W	YDR179W-A	Q03983	463 aa		4.65	□□□□□ -1.67
PXA1	YPL147W	AIM33	Q04516	312 aa		4.65	□□□□□ -1.67
PXA1	YPL147W	MRPL35	Q06678	367 aa		4.65	□□□□□ -1.67
PXA1	YPL147W	YJR112W-A	Q3E743	109 aa		4.65	□□□□□ -1.67
PXA1	YPL147W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
PXA1	YPL147W	EXG1	P23776	448 aa	Known RBP	4.64	□□□□□ -1.67
PXA1	YPL147W	YCR015C	P25616	317 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	HRR25	P29295	494 aa	Known RBP	4.64	□□□□□ -1.67
PXA1	YPL147W	PET127	P32606	800 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	RPC25	P35718	212 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	YHR033W	P38690	423 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	GID8	P40208	455 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	GPI14	P47088	403 aa	Known RBP	4.64	□□□□□ -1.67
PXA1	YPL147W	YAE1	P47118	141 aa	Predicted RBP	4.64	□□□□□ -1.67
PXA1	YPL147W	ECM27	P47144	725 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	IBD2	P53892	351 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	YNL140C	P53910	189 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	MTG1	Q03151	367 aa	Predicted RBP	4.64	□□□□□ -1.67
PXA1	YPL147W	PPN1	Q04119	674 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	YMR027W	Q04371	470 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	SMA2	Q04658	369 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	TRM13	Q12383	476 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	RPS21B	Q3E754	87 aa	Known RBP	4.64	□□□□□ -1.67
PXA1	YPL147W	COQ4	O13525	335 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	POX1	P13711	748 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	PDA1	P16387	420 aa	Known RBP	4.64	□□□□□ -1.67
PXA1	YPL147W	MET16	P18408	261 aa	Predicted RBP	4.64	□□□□□ -1.67
PXA1	YPL147W	TRR1	P29509	319 aa	Known RBP	4.64	□□□□□ -1.67
PXA1	YPL147W	OAR1	P35731	278 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	NAT2	P37293	288 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	THI2	P38141	450 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	BNA4	P38169	460 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	YBR287W	P38355	427 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	RIB4	P50861	169 aa	Predicted RBP	4.64	□□□□□ -1.67
PXA1	YPL147W	CWC23	P52868	283 aa	Predicted RBP	4.64	□□□□□ -1.67
PXA1	YPL147W	SPC98	P53540	846 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	ASI2	P53895	289 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	RNY1	Q02933	434 aa	Known RBP	4.64	□□□□□ -1.67
PXA1	YPL147W	STE23	Q06010	1027 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	YPR196W	Q06595	470 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	PRP11	Q07350	266 aa	Predicted RBP	4.64	□□□□□ -1.67
PXA1	YPL147W	RRI1	Q12468	440 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	CSR2	Q12734	1121 aa		4.64	□□□□□ -1.67
PXA1	YPL147W	UTP10	P42945	1769 aa	Known RBP	4.64	□□□□□ -1.67
PXA1	YPL147W	DDI2	P0CH63	225 aa		4.63	□□□□□ -1.67
PXA1	YPL147W	DDI3	P0CH64	225 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms