RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C CGI121Q03705 181 aaKnown RBP7.33□□□□□ -1.24
LSP1YPL004C URC2Q04411 772 aa7.33□□□□□ -1.24
LSP1YPL004C KRE28Q04431 385 aa7.33□□□□□ -1.24
LSP1YPL004C PAL1Q05518 499 aaKnown RBP7.33□□□□□ -1.24
LSP1YPL004C DCR2Q05924 578 aa7.33□□□□□ -1.24
LSP1YPL004C YPR109WQ06104 294 aa7.33□□□□□ -1.24
LSP1YPL004C YLR446WQ06204 433 aa7.33□□□□□ -1.24
LSP1YPL004C CDA2Q06703 312 aa7.33□□□□□ -1.24
LSP1YPL004C PUS7Q08647 676 aaKnown RBP7.33□□□□□ -1.24
LSP1YPL004C FMP40Q08968 688 aaPredicted RBP7.33□□□□□ -1.24
LSP1YPL004C MDM32Q12171 622 aa7.33□□□□□ -1.24
LSP1YPL004C YOR214CQ12282 236 aa7.33□□□□□ -1.24
LSP1YPL004C PNS1Q12412 539 aa7.33□□□□□ -1.24
LSP1YPL004C RPL24AP04449 155 aaKnown RBP7.32□□□□□ -1.24
LSP1YPL004C STE6P12866 1290 aa7.32□□□□□ -1.24
LSP1YPL004C NUD1P32336 851 aa7.32□□□□□ -1.24
LSP1YPL004C EXO84P38261 753 aa7.32□□□□□ -1.24
LSP1YPL004C PKP1P40530 394 aa7.32□□□□□ -1.24
LSP1YPL004C DCP2P53550 970 aaKnown RBP7.32□□□□□ -1.24
LSP1YPL004C YNL181WP53878 407 aa7.32□□□□□ -1.24
LSP1YPL004C RRN5Q02983 363 aa7.32□□□□□ -1.24
LSP1YPL004C PFA5Q03289 374 aa7.32□□□□□ -1.24
LSP1YPL004C HMO1Q03973 246 aaKnown RBP7.32□□□□□ -1.24
LSP1YPL004C ERB1Q04660 807 aaKnown RBP7.32□□□□□ -1.24
LSP1YPL004C SEI1Q06058 285 aa7.32□□□□□ -1.24
LSP1YPL004C DBP9Q06218 594 aaKnown RBP7.32□□□□□ -1.24
LSP1YPL004C TSC13Q99190 310 aa7.32□□□□□ -1.24
LSP1YPL004C YOL087CQ99247 1116 aa7.32□□□□□ -1.24
LSP1YPL004C MOD5P07884 428 aa7.31□□□□□ -1.24
LSP1YPL004C HSP150P32478 413 aa7.31□□□□□ -1.24
LSP1YPL004C YPT7P32939 208 aa7.31□□□□□ -1.24
LSP1YPL004C YHL012WP38709 493 aa7.31□□□□□ -1.24
LSP1YPL004C RCY1P39531 840 aa7.31□□□□□ -1.24
LSP1YPL004C MET28P40573 187 aa7.31□□□□□ -1.24
LSP1YPL004C ATG4P53867 494 aa7.31□□□□□ -1.24
LSP1YPL004C RHO5P53879 331 aaKnown RBP7.31□□□□□ -1.24
LSP1YPL004C CUZ1P53899 274 aa7.31□□□□□ -1.24
LSP1YPL004C YPL272CQ08984 517 aa7.31□□□□□ -1.24
LSP1YPL004C YDL211CQ12121 372 aa7.31□□□□□ -1.24
LSP1YPL004C YOL159C-AQ3E769 90 aa7.31□□□□□ -1.24
LSP1YPL004C ERD1P16151 362 aa7.3□□□□□ -1.24
LSP1YPL004C YCK1P23291 538 aa7.3□□□□□ -1.24
LSP1YPL004C ERG8P24521 451 aa7.3□□□□□ -1.24
LSP1YPL004C CLB4P24871 460 aa7.3□□□□□ -1.24
LSP1YPL004C NTG1P31378 399 aa7.3□□□□□ -1.24
LSP1YPL004C DHR2P36009 735 aaPredicted RBP7.3□□□□□ -1.24
LSP1YPL004C ECM34P38728 170 aa7.3□□□□□ -1.24
LSP1YPL004C NSG1P38837 291 aa7.3□□□□□ -1.24
LSP1YPL004C VHR1P40522 640 aa7.3□□□□□ -1.24
LSP1YPL004C AGP3P43548 558 aa7.3□□□□□ -1.24
LSP1YPL004C ECO1P43605 281 aa7.3□□□□□ -1.24
LSP1YPL004C RPE1P46969 238 aa7.3□□□□□ -1.24
LSP1YPL004C UBX6P47049 396 aa7.3□□□□□ -1.24
LSP1YPL004C NUP57P48837 541 aa7.3□□□□□ -1.24
LSP1YPL004C TOS2P50078 622 aa7.3□□□□□ -1.24
LSP1YPL004C MPC1P53157 130 aaKnown RBP7.3□□□□□ -1.24
LSP1YPL004C YPL068CQ02749 293 aa7.3□□□□□ -1.24
LSP1YPL004C PLM2Q04383 521 aa7.3□□□□□ -1.24
LSP1YPL004C MRX4Q12467 430 aa7.3□□□□□ -1.24
LSP1YPL004C ADE5,7P07244 802 aaKnown RBP7.29□□□□□ -1.24
LSP1YPL004C SUI3P09064 285 aaKnown RBP7.29□□□□□ -1.24
LSP1YPL004C YOL163WP0CF20 169 aa7.29□□□□□ -1.24
LSP1YPL004C NCP1P16603 691 aaKnown RBP7.29□□□□□ -1.24
LSP1YPL004C RPB10P22139 70 aa7.29□□□□□ -1.24
LSP1YPL004C GRR1P24814 1151 aa7.29□□□□□ -1.24
LSP1YPL004C IDH1P28834 360 aaKnown RBP RIP-Chip data7.29□□□□□ -1.24not detected
LSP1YPL004C SEC61P32915 480 aa7.29□□□□□ -1.24
LSP1YPL004C YKR073CP36153 106 aa7.29□□□□□ -1.24
LSP1YPL004C GRE3P38715 327 aaKnown RBP RIP-Chip data7.29□□□□□ -1.24not detected
LSP1YPL004C YHR097CP38809 366 aaKnown RBP7.29□□□□□ -1.24
LSP1YPL004C SWD1P39706 426 aa7.29□□□□□ -1.24
LSP1YPL004C SOK1P40317 901 aa7.29□□□□□ -1.24
LSP1YPL004C PGU1P47180 361 aa7.29□□□□□ -1.24
LSP1YPL004C IMD4P50094 524 aaKnown RBP7.29□□□□□ -1.24
LSP1YPL004C LSG1P53145 640 aaKnown RBP7.29□□□□□ -1.24
LSP1YPL004C SRP1Q02821 542 aaKnown RBP7.29□□□□□ -1.24
LSP1YPL004C RNH202Q05635 350 aa7.29□□□□□ -1.24
LSP1YPL004C NDL1Q06568 189 aa7.29□□□□□ -1.24
LSP1YPL004C TIM9O74700 87 aa7.28□□□□□ -1.24
LSP1YPL004C RER1P25560 188 aa7.28□□□□□ -1.24
LSP1YPL004C APE2P32454 952 aaKnown RBP7.28□□□□□ -1.24
LSP1YPL004C RPN2P32565 945 aaKnown RBP7.28□□□□□ -1.24
LSP1YPL004C GDH2P33327 1092 aaKnown RBP7.28□□□□□ -1.24
LSP1YPL004C NUF2P33895 451 aa7.28□□□□□ -1.24
LSP1YPL004C HCS1P34243 683 aa7.28□□□□□ -1.24
LSP1YPL004C AST2P39945 430 aaKnown RBP7.28□□□□□ -1.24
LSP1YPL004C YEL057CP39983 233 aa7.28□□□□□ -1.24
LSP1YPL004C YNL195CP40168 261 aa7.28□□□□□ -1.24
LSP1YPL004C BPL1P48445 690 aaPredicted RBP7.28□□□□□ -1.24
LSP1YPL004C PBP1P53297 722 aaKnown RBP7.28□□□□□ -1.24
LSP1YPL004C COS6P53344 381 aa7.28□□□□□ -1.24
LSP1YPL004C TPS1Q00764 495 aaKnown RBP7.28□□□□□ -1.24
LSP1YPL004C YDR239CQ03780 787 aa7.28□□□□□ -1.24
LSP1YPL004C YDR249CQ03787 373 aa7.28□□□□□ -1.24
LSP1YPL004C ARV1Q06541 321 aa7.28□□□□□ -1.24
LSP1YPL004C BRX1Q08235 291 aaKnown RBP7.28□□□□□ -1.24
LSP1YPL004C RRG7Q08774 242 aaPredicted RBP7.28□□□□□ -1.24
LSP1YPL004C PSY3Q12318 242 aa7.28□□□□□ -1.24
LSP1YPL004C NPC2Q12408 173 aa7.28□□□□□ -1.24
LSP1YPL004C CDC39P25655 2108 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms