RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABP140	YOR239W	PKP2	P53170	491 aa		3.59	□□□□□ -1.83
ABP140	YOR239W	SCW11	P53189	542 aa		3.59	□□□□□ -1.83
ABP140	YOR239W	BUD32	P53323	261 aa		3.59	□□□□□ -1.83
ABP140	YOR239W	ERV25	P54837	211 aa	Known RBP	3.59	□□□□□ -1.83
ABP140	YOR239W	YMR209C	Q03648	457 aa		3.59	□□□□□ -1.83
ABP140	YOR239W	PEX12	Q04370	399 aa		3.59	□□□□□ -1.83
ABP140	YOR239W	SSL1	Q04673	461 aa	Predicted RBP	3.59	□□□□□ -1.83
ABP140	YOR239W	YHC1	Q05900	231 aa	Known RBP	3.59	□□□□□ -1.83
ABP140	YOR239W	YOL159C	Q08300	171 aa		3.59	□□□□□ -1.83
ABP140	YOR239W	NMD4	Q12129	218 aa		3.59	□□□□□ -1.83
ABP140	YOR239W	YDR018C	Q12185	396 aa		3.59	□□□□□ -1.83
ABP140	YOR239W	YLR126C	Q12288	251 aa		3.59	□□□□□ -1.83
ABP140	YOR239W	YOP1	Q12402	180 aa		3.59	□□□□□ -1.83
ABP140	YOR239W	KCS1	Q12494	1050 aa		3.59	□□□□□ -1.83
ABP140	YOR239W	EFG1	Q3E705	233 aa	Known RBP	3.59	□□□□□ -1.83
ABP140	YOR239W	RGS2	Q99188	309 aa		3.59	□□□□□ -1.83
ABP140	YOR239W	YER152C	P10356	443 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	DAT1	P13483	248 aa	Known RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
ABP140	YOR239W	PRP2	P20095	876 aa	Predicted RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	IDP1	P21954	428 aa	Known RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	PRE1	P22141	198 aa	Known RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	RPI1	P23250	407 aa	Known RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	YCL002C	P25565	263 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	AHC2	P25649	128 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	RMA1	P36001	430 aa	Known RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	SRY1	P36007	326 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	YKR075C	P36155	307 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	AFG3	P39925	761 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	ATM1	P40416	690 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	ARF3	P40994	183 aa	RIP-Chip data	3.58	□□□□□ -1.84	not detected
ABP140	YOR239W	RPL10	P41805	221 aa	Known RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	SSY5	P47002	699 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	NCS6	P53088	359 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	YGR012W	P53206	393 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	NQM1	P53228	333 aa	Predicted RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	SLX9	P53251	210 aa	Predicted RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	SSU72	P53538	206 aa	Predicted RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	RPT4	P53549	437 aa	Known RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	RHO3	Q00245	231 aa	Known RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
ABP140	YOR239W	TRM12	Q04235	462 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	YDR222W	Q04925	415 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	YPR147C	Q06522	304 aa	Known RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	HFI1	Q12060	488 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	RKM5	Q12367	367 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	PFK27	Q12471	397 aa	Predicted RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	CMR1	Q12510	522 aa	Known RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	MTR10	Q99189	972 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	Q0144	Q9ZZW2	109 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	CDC7	P06243	507 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	RHO2	P06781	192 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	ARG80	P07249	177 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	ALG7	P07286	448 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	FUN14	P18411	198 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	SNF6	P18888	332 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	RNR1	P21524	888 aa	Known RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	RPB10	P22139	70 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	PRE7	P23724	241 aa	Known RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	MNE1	P24720	663 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	RRP7	P25368	297 aa	Predicted RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	TAH1	P25638	111 aa	Predicted RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	SNC1	P31109	117 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	MSN4	P33749	630 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	WBP1	P33767	430 aa	Known RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	TUL1	P36096	758 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	FLO10	P36170	1169 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	MRPL36	P36531	177 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	PCM1	P38628	557 aa	Known RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	SLZ1	P40167	298 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	SWM2	P40342	146 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	TMA108	P40462	946 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	YJL218W	P40892	196 aa	Known RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	YFL040W	P43562	540 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	AIM22	P47051	409 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	MCM22	P47167	239 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	MRX6	P48564	524 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	NBP35	P52920	328 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	SHY1	P53266	389 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	TIM13	P53299	105 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	GND2	P53319	492 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	TNA1	P53322	534 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	MKC7	P53379	596 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	REG1	Q00816	1014 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	KIN4	Q01919	800 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	MSC1	Q03104	513 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	CTL1	Q03220	320 aa	Known RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	RKM2	Q03942	479 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	LRS4	Q04087	347 aa	Known RBP	3.58	□□□□□ -1.84
ABP140	YOR239W	YDR444W	Q04093	687 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	SEN15	Q04675	128 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	NUT2	Q06213	157 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	FRQ1	Q06389	190 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	YPR127W	Q06494	345 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	GPI11	Q06636	219 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	SSK1	Q07084	712 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	CSM4	Q08955	156 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	VMA9	Q3E7B6	73 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	SUS1	Q6WNK7	96 aa		3.58	□□□□□ -1.84
ABP140	YOR239W	MDM12	Q92328	271 aa		3.58	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms