RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W YLL053CP0CD98 152 aa2.94□□□□□ -1.94
MSH2YOL090W RRT12P25381 491 aa2.94□□□□□ -1.94
MSH2YOL090W CSM1P25651 190 aa2.94□□□□□ -1.94
MSH2YOL090W PPZ1P26570 692 aa2.94□□□□□ -1.94
MSH2YOL090W PUB1P32588 453 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
MSH2YOL090W RIB1P38066 345 aa2.94□□□□□ -1.94
MSH2YOL090W PFS1P38872 237 aa2.94□□□□□ -1.94
MSH2YOL090W DSN1P40568 576 aa2.94□□□□□ -1.94
MSH2YOL090W YIR016WP40572 265 aa2.94□□□□□ -1.94
MSH2YOL090W MHP1P43638 1398 aa2.94□□□□□ -1.94
MSH2YOL090W GLG2P47011 380 aa2.94□□□□□ -1.94
MSH2YOL090W COG2P53271 262 aa2.94□□□□□ -1.94
MSH2YOL090W SAM50P53969 484 aa2.94□□□□□ -1.94
MSH2YOL090W NUP53Q03790 475 aa2.94□□□□□ -1.94
MSH2YOL090W RTT103Q05543 409 aa2.94□□□□□ -1.94
MSH2YOL090W SDO1Q07953 250 aaKnown RBP2.94□□□□□ -1.94
MSH2YOL090W SUT2Q12286 268 aa2.94□□□□□ -1.94
MSH2YOL090W CDC33P07260 213 aaKnown RBP2.94□□□□□ -1.94
MSH2YOL090W COQ1P18900 473 aa2.94□□□□□ -1.94
MSH2YOL090W CLB2P24869 491 aa2.94□□□□□ -1.94
MSH2YOL090W CYS4P32582 507 aaKnown RBP2.94□□□□□ -1.94
MSH2YOL090W SPT10P35208 640 aa2.94□□□□□ -1.94
MSH2YOL090W DOA1P36037 715 aa2.94□□□□□ -1.94
MSH2YOL090W YKL071WP36086 256 aa2.94□□□□□ -1.94
MSH2YOL090W PRS4P38063 326 aaPredicted RBP2.94□□□□□ -1.94
MSH2YOL090W SNL1P40548 159 aa2.94□□□□□ -1.94
MSH2YOL090W LYS20P48570 428 aaKnown RBP2.94□□□□□ -1.94
MSH2YOL090W SPT20P50875 604 aa2.94□□□□□ -1.94
MSH2YOL090W BIO4P53630 237 aa2.94□□□□□ -1.94
MSH2YOL090W NUP116Q02630 1113 aa2.94□□□□□ -1.94
MSH2YOL090W BNA7Q04066 261 aa2.94□□□□□ -1.94
MSH2YOL090W BUR2Q05949 395 aa2.94□□□□□ -1.94
MSH2YOL090W SRO7Q12038 1033 aa2.94□□□□□ -1.94
MSH2YOL090W YIL177CP40434 1758 aa2.93□□□□□ -1.94
MSH2YOL090W YJL225CP40889 1758 aa2.93□□□□□ -1.94
MSH2YOL090W SSK22P25390 1331 aaPredicted RBP2.93□□□□□ -1.94
MSH2YOL090W MES1P00958 751 aaKnown RBP2.93□□□□□ -1.94
MSH2YOL090W RPL35AP0CX84 120 aaKnown RBP2.93□□□□□ -1.94
MSH2YOL090W RPL35BP0CX85 120 aaKnown RBP2.93□□□□□ -1.94
MSH2YOL090W MXR2P25566 168 aa2.93□□□□□ -1.94
MSH2YOL090W ICL1P28240 557 aaPredicted RBP2.93□□□□□ -1.94
MSH2YOL090W SKT5P34226 696 aa2.93□□□□□ -1.94
MSH2YOL090W FMP52P40008 231 aa2.93□□□□□ -1.94
MSH2YOL090W UTP25P40498 721 aaKnown RBP2.93□□□□□ -1.94
MSH2YOL090W TRS85P46944 698 aa2.93□□□□□ -1.94
MSH2YOL090W YPL068CQ02749 293 aa2.93□□□□□ -1.94
MSH2YOL090W SKI8Q02793 397 aaPredicted RBP2.93□□□□□ -1.94
MSH2YOL090W GIP3Q03016 1276 aa2.93□□□□□ -1.94
MSH2YOL090W YMR209CQ03648 457 aa2.93□□□□□ -1.94
MSH2YOL090W DLT1Q04216 342 aa2.93□□□□□ -1.94
MSH2YOL090W HSP31Q04432 237 aa2.93□□□□□ -1.94
MSH2YOL090W CDC123Q05791 360 aa2.93□□□□□ -1.94
MSH2YOL090W MSH5Q12175 901 aa2.93□□□□□ -1.94
MSH2YOL090W RUP1Q12242 671 aa2.93□□□□□ -1.94
MSH2YOL090W SUC2P00724 532 aa2.93□□□□□ -1.94
MSH2YOL090W TCP1P12612 559 aaKnown RBP2.93□□□□□ -1.94
MSH2YOL090W NUP1P20676 1076 aa2.93□□□□□ -1.94
MSH2YOL090W UTR1P21373 530 aa2.93□□□□□ -1.94
MSH2YOL090W PTP1P25044 335 aa2.93□□□□□ -1.94
MSH2YOL090W PPA2P28239 310 aa2.93□□□□□ -1.94
MSH2YOL090W HIS7P33734 552 aaKnown RBP2.93□□□□□ -1.94
MSH2YOL090W APL3P38065 1025 aa2.93□□□□□ -1.94
MSH2YOL090W MTW1P39731 289 aa2.93□□□□□ -1.94
MSH2YOL090W YER079WP40052 210 aaKnown RBP2.93□□□□□ -1.94
MSH2YOL090W LAS21P40367 830 aa2.93□□□□□ -1.94
MSH2YOL090W ABM1P47146 123 aa2.93□□□□□ -1.94
MSH2YOL090W YGR067CP53243 804 aa2.93□□□□□ -1.94
MSH2YOL090W DIA1P54005 336 aa2.93□□□□□ -1.94
MSH2YOL090W MRP51Q02950 344 aa2.93□□□□□ -1.94
MSH2YOL090W SNU56Q03782 492 aaKnown RBP2.93□□□□□ -1.94
MSH2YOL090W SMP3Q04174 516 aa2.93□□□□□ -1.94
MSH2YOL090W ATG26Q06321 1198 aa2.93□□□□□ -1.94
MSH2YOL090W ACK1Q07622 623 aaPredicted RBP2.93□□□□□ -1.94
MSH2YOL090W GLE1Q12315 538 aa2.93□□□□□ -1.94
MSH2YOL090W RKM5Q12367 367 aa2.93□□□□□ -1.94
MSH2YOL090W YCL012CQ8J0M4 134 aa2.93□□□□□ -1.94
MSH2YOL090W MET3P08536 511 aa2.92□□□□□ -1.94
MSH2YOL090W CLN3P13365 580 aa2.92□□□□□ -1.94
MSH2YOL090W RPO26P20435 155 aa2.92□□□□□ -1.94
MSH2YOL090W FUN19P28003 413 aaPredicted RBP2.92□□□□□ -1.94
MSH2YOL090W TOA2P32774 122 aa2.92□□□□□ -1.94
MSH2YOL090W SKG6P32900 734 aaPredicted RBP2.92□□□□□ -1.94
MSH2YOL090W GDH2P33327 1092 aaKnown RBP2.92□□□□□ -1.94
MSH2YOL090W TAF14P35189 244 aa2.92□□□□□ -1.94
MSH2YOL090W MIA40P36046 403 aa2.92□□□□□ -1.94
MSH2YOL090W YMR134WP40207 237 aa2.92□□□□□ -1.94
MSH2YOL090W SCD6P45978 349 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94 RIP-Chip
MSH2YOL090W MRX5P47007 382 aa2.92□□□□□ -1.94
MSH2YOL090W TAF6P53040 516 aa2.92□□□□□ -1.94
MSH2YOL090W PKP2P53170 491 aa2.92□□□□□ -1.94
MSH2YOL090W GCN5Q03330 439 aa2.92□□□□□ -1.94
MSH2YOL090W AAD15Q08361 143 aa2.92□□□□□ -1.94
MSH2YOL090W UTP10P42945 1769 aaKnown RBP2.92□□□□□ -1.94
MSH2YOL090W KRE5P22023 1365 aa2.92□□□□□ -1.94
MSH2YOL090W MATALPHA2P0CY08 210 aa2.92□□□□□ -1.94
MSH2YOL090W HMLALPHA2P0CY09 210 aa2.92□□□□□ -1.94
MSH2YOL090W TYR1P20049 452 aa2.92□□□□□ -1.94
MSH2YOL090W RPS2P25443 254 aaKnown RBP2.92□□□□□ -1.94
MSH2YOL090W PRR1P28708 518 aa2.92□□□□□ -1.94
MSH2YOL090W RAD24P32641 659 aa2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms