RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C RRT2P38332 387 aa1.6□□□□□ -2.15
SFB2YNL049C TAE1P38340 232 aa1.6□□□□□ -2.15
SFB2YNL049C MBB1P39534 108 aa1.6□□□□□ -2.15
SFB2YNL049C GAT1P43574 510 aa1.6□□□□□ -2.15
SFB2YNL049C NMD5P46970 1048 aa1.6□□□□□ -2.15
SFB2YNL049C PMT4P46971 762 aa1.6□□□□□ -2.15
SFB2YNL049C ATG27P46989 271 aa1.6□□□□□ -2.15
SFB2YNL049C YPT11P48559 417 aa1.6□□□□□ -2.15
SFB2YNL049C UBP8P50102 471 aa1.6□□□□□ -2.15
SFB2YNL049C OGG1P53397 376 aaPredicted RBP1.6□□□□□ -2.15
SFB2YNL049C KTR6P54070 446 aa1.6□□□□□ -2.15
SFB2YNL049C KAP120Q02932 1032 aa1.6□□□□□ -2.15
SFB2YNL049C YET2Q04210 160 aa1.6□□□□□ -2.15
SFB2YNL049C FAR10Q06001 478 aa1.6□□□□□ -2.15
SFB2YNL049C GLK1P17709 500 aaKnown RBP1.59□□□□□ -2.15
SFB2YNL049C RRP7P25368 297 aaPredicted RBP1.59□□□□□ -2.15
SFB2YNL049C RPS2P25443 254 aaKnown RBP1.59□□□□□ -2.15
SFB2YNL049C TPS2P31688 896 aaKnown RBP1.59□□□□□ -2.15
SFB2YNL049C SMI1P32566 505 aa1.59□□□□□ -2.15
SFB2YNL049C HCS1P34243 683 aa1.59□□□□□ -2.15
SFB2YNL049C ROT2P38138 954 aa1.59□□□□□ -2.15
SFB2YNL049C TRM7P38238 310 aaKnown RBP1.59□□□□□ -2.15
SFB2YNL049C VHC1P38329 1120 aa1.59□□□□□ -2.15
SFB2YNL049C GIM4P40005 111 aaKnown RBP1.59□□□□□ -2.15
SFB2YNL049C EFM4P40516 257 aa1.59□□□□□ -2.15
SFB2YNL049C YIR014WP40570 242 aa1.59□□□□□ -2.15
SFB2YNL049C CAK1P43568 368 aaPredicted RBP1.59□□□□□ -2.15
SFB2YNL049C MNN5P46982 586 aa1.59□□□□□ -2.15
SFB2YNL049C TRM9P49957 279 aa1.59□□□□□ -2.15
SFB2YNL049C SMM1P53720 384 aaKnown RBP1.59□□□□□ -2.15
SFB2YNL049C DUG3P53871 357 aa1.59□□□□□ -2.15
SFB2YNL049C IDP3P53982 420 aaKnown RBP1.59□□□□□ -2.15
SFB2YNL049C CDC14Q00684 551 aa1.59□□□□□ -2.15
SFB2YNL049C CAC2Q04199 468 aa1.59□□□□□ -2.15
SFB2YNL049C RRP45Q05636 305 aaKnown RBP1.59□□□□□ -2.15
SFB2YNL049C THP1Q08231 455 aa1.59□□□□□ -2.15
SFB2YNL049C SMF3Q12078 473 aaPredicted RBP1.59□□□□□ -2.15
SFB2YNL049C YLR112WQ12130 139 aa1.59□□□□□ -2.15
SFB2YNL049C FLO9P39712 1322 aa1.59□□□□□ -2.16
SFB2YNL049C RAD52P06778 471 aaKnown RBP1.59□□□□□ -2.16
SFB2YNL049C MET16P18408 261 aaPredicted RBP1.59□□□□□ -2.16
SFB2YNL049C DAP2P18962 818 aa1.59□□□□□ -2.16
SFB2YNL049C RPB8P20436 146 aa1.59□□□□□ -2.16
SFB2YNL049C ILV6P25605 309 aaKnown RBP1.59□□□□□ -2.16
SFB2YNL049C CPR3P25719 182 aa1.59□□□□□ -2.16
SFB2YNL049C SSE1P32589 693 aaKnown RBP1.59□□□□□ -2.16
SFB2YNL049C MDL1P33310 695 aa1.59□□□□□ -2.16
SFB2YNL049C TIP20P33891 701 aa1.59□□□□□ -2.16
SFB2YNL049C DOA1P36037 715 aa1.59□□□□□ -2.16
SFB2YNL049C TCM62P38228 572 aaKnown RBP1.59□□□□□ -2.16
SFB2YNL049C YHR210CP38893 341 aa1.59□□□□□ -2.16
SFB2YNL049C GGC1P38988 300 aa1.59□□□□□ -2.16
SFB2YNL049C CFD1P40558 293 aa1.59□□□□□ -2.16
SFB2YNL049C GCD14P46959 383 aaPredicted RBP1.59□□□□□ -2.16
SFB2YNL049C YGR149WP48236 432 aa1.59□□□□□ -2.16
SFB2YNL049C SEH1P53011 349 aaKnown RBP1.59□□□□□ -2.16
SFB2YNL049C YGL260WP53056 76 aa1.59□□□□□ -2.16
SFB2YNL049C PRP38Q00723 242 aaPredicted RBP1.59□□□□□ -2.16
SFB2YNL049C SED5Q01590 340 aa1.59□□□□□ -2.16
SFB2YNL049C MRS2Q01926 470 aa1.59□□□□□ -2.16
SFB2YNL049C LGE1Q02796 332 aaKnown RBP1.59□□□□□ -2.16
SFB2YNL049C RLI1Q03195 608 aaKnown RBP1.59□□□□□ -2.16
SFB2YNL049C ARP10Q04549 284 aa1.59□□□□□ -2.16
SFB2YNL049C YOR365CQ08844 703 aa1.59□□□□□ -2.16
SFB2YNL049C RRP42Q12277 265 aaPredicted RBP1.59□□□□□ -2.16
SFB2YNL049C DDP1Q99321 188 aaKnown RBP1.59□□□□□ -2.16
SFB2YNL049C RNA1P11745 407 aaKnown RBP1.58□□□□□ -2.16
SFB2YNL049C PSO2P30620 661 aa1.58□□□□□ -2.16
SFB2YNL049C AFG1P32317 509 aa1.58□□□□□ -2.16
SFB2YNL049C MSN2P33748 704 aa1.58□□□□□ -2.16
SFB2YNL049C FMP46P36141 133 aaKnown RBP1.58□□□□□ -2.16
SFB2YNL049C MAK5P38112 773 aaPredicted RBP1.58□□□□□ -2.16
SFB2YNL049C SLM4P38247 162 aa1.58□□□□□ -2.16
SFB2YNL049C PHO90P39535 881 aa1.58□□□□□ -2.16
SFB2YNL049C YEL028WP39989 153 aa1.58□□□□□ -2.16
SFB2YNL049C VRG4P40107 337 aa1.58□□□□□ -2.16
SFB2YNL049C UTP18P40362 594 aaPredicted RBP1.58□□□□□ -2.16
SFB2YNL049C ICE2P40499 491 aa1.58□□□□□ -2.16
SFB2YNL049C SEC28P40509 296 aaKnown RBP1.58□□□□□ -2.16
SFB2YNL049C CUP9P41817 306 aa1.58□□□□□ -2.16
SFB2YNL049C ALK1P43633 760 aaKnown RBP1.58□□□□□ -2.16
SFB2YNL049C TOS3P43637 560 aa1.58□□□□□ -2.16
SFB2YNL049C YJL055WP47044 245 aa1.58□□□□□ -2.16
SFB2YNL049C YGR016WP53209 190 aa1.58□□□□□ -2.16
SFB2YNL049C PDR16P53860 351 aaKnown RBP1.58□□□□□ -2.16
SFB2YNL049C NUP100Q02629 959 aa1.58□□□□□ -2.16
SFB2YNL049C YDR209CQ03480 137 aa1.58□□□□□ -2.16
SFB2YNL049C HRI1Q05905 244 aaKnown RBP1.58□□□□□ -2.16
SFB2YNL049C HNT3Q08702 217 aa1.58□□□□□ -2.16
SFB2YNL049C RDR1Q08904 546 aa1.58□□□□□ -2.16
SFB2YNL049C GRE1Q08969 168 aa1.58□□□□□ -2.16
SFB2YNL049C BI3Q9ZZW7 517 aa1.58□□□□□ -2.16
SFB2YNL049C FMP27Q06179 2628 aa1.58□□□□□ -2.16
SFB2YNL049C VPS13Q07878 3144 aa1.58□□□□□ -2.16
SFB2YNL049C AMD1P15274 810 aaKnown RBP1.58□□□□□ -2.16
SFB2YNL049C YAP1P19880 650 aaKnown RBP1.58□□□□□ -2.16
SFB2YNL049C RAD14P28519 371 aa1.58□□□□□ -2.16
SFB2YNL049C EBP2P36049 427 aaKnown RBP1.58□□□□□ -2.16
SFB2YNL049C BNA4P38169 460 aa1.58□□□□□ -2.16
SFB2YNL049C LDB7P38210 180 aa1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 105.9 ms