RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W ICT1Q12385 394 aa5.02□□□□□ -1.61
SPG4YMR107W SKM1Q12469 655 aa5.02□□□□□ -1.61
SPG4YMR107W HBN1Q96VH4 193 aa5.02□□□□□ -1.61
SPG4YMR107W MTR10Q99189 972 aa5.02□□□□□ -1.61
SPG4YMR107W SIR2P06700 562 aa5.01□□□□□ -1.61
SPG4YMR107W CIT2P08679 460 aa5.01□□□□□ -1.61
SPG4YMR107W ZWF1P11412 505 aaKnown RBP5.01□□□□□ -1.61
SPG4YMR107W GAL2P13181 574 aa5.01□□□□□ -1.61
SPG4YMR107W HAP4P14064 554 aa5.01□□□□□ -1.61
SPG4YMR107W PRE7P23724 241 aaKnown RBP5.01□□□□□ -1.61
SPG4YMR107W PUP1P25043 261 aa5.01□□□□□ -1.61
SPG4YMR107W YCR099CP25657 155 aa5.01□□□□□ -1.61
SPG4YMR107W LHP1P33399 275 aaKnown RBP5.01□□□□□ -1.61
SPG4YMR107W MIA40P36046 403 aa5.01□□□□□ -1.61
SPG4YMR107W YKL162CP36052 402 aa5.01□□□□□ -1.61
SPG4YMR107W TCM62P38228 572 aaKnown RBP5.01□□□□□ -1.61
SPG4YMR107W LNP1P38878 278 aa5.01□□□□□ -1.61
SPG4YMR107W NVJ1P38881 321 aa5.01□□□□□ -1.61
SPG4YMR107W YEL028WP39989 153 aa5.01□□□□□ -1.61
SPG4YMR107W EAF5P39995 279 aa5.01□□□□□ -1.61
SPG4YMR107W YIR035CP40579 254 aa5.01□□□□□ -1.61
SPG4YMR107W OPT1P40897 799 aa5.01□□□□□ -1.61
SPG4YMR107W RTS2P40962 232 aa5.01□□□□□ -1.61
SPG4YMR107W CIN1P40987 1014 aa5.01□□□□□ -1.61
SPG4YMR107W PSA1P41940 361 aaKnown RBP5.01□□□□□ -1.61
SPG4YMR107W SKP2P42843 763 aa5.01□□□□□ -1.61
SPG4YMR107W PRM10P42946 383 aa5.01□□□□□ -1.61
SPG4YMR107W PAM16P42949 149 aa5.01□□□□□ -1.61
SPG4YMR107W GAT1P43574 510 aa5.01□□□□□ -1.61
SPG4YMR107W SCD6P45978 349 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
SPG4YMR107W RPS10BP46784 105 aaKnown RBP5.01□□□□□ -1.61
SPG4YMR107W MRX5P47007 382 aa5.01□□□□□ -1.61
SPG4YMR107W STR3P53101 465 aaKnown RBP5.01□□□□□ -1.61
SPG4YMR107W YGL159WP53110 370 aa5.01□□□□□ -1.61
SPG4YMR107W VPS73P53142 486 aaKnown RBP5.01□□□□□ -1.61
SPG4YMR107W RRN9P53437 365 aa5.01□□□□□ -1.61
SPG4YMR107W YNL034WP53963 612 aa5.01□□□□□ -1.61
SPG4YMR107W MEH1Q02205 184 aa5.01□□□□□ -1.61
SPG4YMR107W FDC1Q03034 503 aa5.01□□□□□ -1.61
SPG4YMR107W RLI1Q03195 608 aaKnown RBP5.01□□□□□ -1.61
SPG4YMR107W TPP1Q03796 238 aa5.01□□□□□ -1.61
SPG4YMR107W AIM32Q04689 311 aa5.01□□□□□ -1.61
SPG4YMR107W YMR321CQ04898 105 aa5.01□□□□□ -1.61
SPG4YMR107W RRP45Q05636 305 aaKnown RBP5.01□□□□□ -1.61
SPG4YMR107W RRP40Q08285 240 aaKnown RBP5.01□□□□□ -1.61
SPG4YMR107W RPS10AQ08745 105 aaPredicted RBP5.01□□□□□ -1.61
SPG4YMR107W TRM8Q12009 286 aa5.01□□□□□ -1.61
SPG4YMR107W RRG1Q12167 365 aaPredicted RBP5.01□□□□□ -1.61
SPG4YMR107W ERP3Q12403 225 aa5.01□□□□□ -1.61
SPG4YMR107W SNF8Q12483 233 aa5.01□□□□□ -1.61
SPG4YMR107W EFG1Q3E705 233 aaKnown RBP5.01□□□□□ -1.61
SPG4YMR107W PCC1Q3E833 88 aa5.01□□□□□ -1.61
SPG4YMR107W YPR096CO13587 100 aa5□□□□□ -1.61
SPG4YMR107W HEM2P05373 342 aa5□□□□□ -1.61
SPG4YMR107W CBP6P07253 162 aaPredicted RBP5□□□□□ -1.61
SPG4YMR107W APE1P14904 514 aa5□□□□□ -1.61
SPG4YMR107W IDP1P21954 428 aaKnown RBP5□□□□□ -1.61
SPG4YMR107W SEC22P22214 214 aa5□□□□□ -1.61
SPG4YMR107W YIM1P28625 365 aa5□□□□□ -1.61
SPG4YMR107W HOM6P31116 359 aaKnown RBP5□□□□□ -1.61
SPG4YMR107W DBF20P32328 564 aa5□□□□□ -1.61
SPG4YMR107W COX13P32799 129 aa5□□□□□ -1.61
SPG4YMR107W PTR2P32901 601 aa5□□□□□ -1.61
SPG4YMR107W VAM7P32912 316 aa5□□□□□ -1.61
SPG4YMR107W KAE1P36132 386 aa5□□□□□ -1.61
SPG4YMR107W DTR1P38125 572 aa5□□□□□ -1.61
SPG4YMR107W AIM46P38885 310 aa5□□□□□ -1.61
SPG4YMR107W HMF1P40037 129 aaKnown RBP5□□□□□ -1.61
SPG4YMR107W PKP1P40530 394 aa5□□□□□ -1.61
SPG4YMR107W HIS6P40545 261 aa5□□□□□ -1.61
SPG4YMR107W PFD1P46988 109 aa5□□□□□ -1.61
SPG4YMR107W TAX4P47030 604 aa5□□□□□ -1.61
SPG4YMR107W YJL016WP47072 561 aa5□□□□□ -1.61
SPG4YMR107W GTO1P48239 356 aa5□□□□□ -1.61
SPG4YMR107W FOL2P51601 243 aaKnown RBP5□□□□□ -1.61
SPG4YMR107W ERV14P53173 138 aa5□□□□□ -1.61
SPG4YMR107W EFM5P53200 248 aaKnown RBP5□□□□□ -1.61
SPG4YMR107W YGR035CP53222 116 aa5□□□□□ -1.61
SPG4YMR107W OKP1P53298 406 aa5□□□□□ -1.61
SPG4YMR107W SIW14P53965 281 aa5□□□□□ -1.61
SPG4YMR107W SNO1Q03144 224 aa5□□□□□ -1.61
SPG4YMR107W YDR387CQ04162 555 aa5□□□□□ -1.61
SPG4YMR107W YMR087WQ04299 284 aa5□□□□□ -1.61
SPG4YMR107W MDM30Q05930 598 aa5□□□□□ -1.61
SPG4YMR107W YLR455WQ06188 304 aa5□□□□□ -1.61
SPG4YMR107W YLR173WQ06247 608 aa5□□□□□ -1.61
SPG4YMR107W CYK3Q07533 885 aa5□□□□□ -1.61
SPG4YMR107W SCP1Q08873 200 aa5□□□□□ -1.61
SPG4YMR107W GUP2Q08929 609 aa5□□□□□ -1.61
SPG4YMR107W YPL245WQ12179 454 aaKnown RBP5□□□□□ -1.61
SPG4YMR107W CTF3Q12748 733 aa5□□□□□ -1.61
SPG4YMR107W RRP12Q12754 1228 aaKnown RBP5□□□□□ -1.61
SPG4YMR107W PHO5P00635 467 aa4.99□□□□□ -1.61
SPG4YMR107W CYT1P07143 309 aa4.99□□□□□ -1.61
SPG4YMR107W FBP1P09201 348 aa4.99□□□□□ -1.61
SPG4YMR107W CDC23P16522 626 aa4.99□□□□□ -1.61
SPG4YMR107W RPS1BP23248 255 aaKnown RBP4.99□□□□□ -1.61
SPG4YMR107W TKL1P23254 680 aaKnown RBP4.99□□□□□ -1.61
SPG4YMR107W FAA1P30624 700 aaKnown RBP4.99□□□□□ -1.61
SPG4YMR107W LYP1P32487 611 aa4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 55.9 ms