RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W YGL138CP53122 345 aa2.4□□□□□ -2.03
CSI1YMR025W MRPL19P53875 158 aa2.4□□□□□ -2.03
CSI1YMR025W MDM1Q01846 1127 aa2.4□□□□□ -2.03
CSI1YMR025W YCR024C-BQ3E7Z8 88 aa2.4□□□□□ -2.03
CSI1YMR025W SEC7P11075 2009 aaKnown RBP2.4□□□□□ -2.03
CSI1YMR025W GEA1P47102 1408 aaPredicted RBP2.4□□□□□ -2.03
CSI1YMR025W ARO1P08566 1588 aaKnown RBP2.4□□□□□ -2.03
CSI1YMR025W INH1P01097 85 aa2.39□□□□□ -2.03
CSI1YMR025W RED1P14291 827 aa2.39□□□□□ -2.03
CSI1YMR025W CLB3P24870 427 aa2.39□□□□□ -2.03
CSI1YMR025W SAS3P34218 831 aa2.39□□□□□ -2.03
CSI1YMR025W FHL1P39521 936 aa2.39□□□□□ -2.03
CSI1YMR025W RPN14P53196 417 aa2.39□□□□□ -2.03
CSI1YMR025W STD1Q02794 444 aa2.39□□□□□ -2.03
CSI1YMR025W YOL159C-AQ3E769 90 aa2.39□□□□□ -2.03
CSI1YMR025W MLP2P40457 1679 aa2.38□□□□□ -2.03
CSI1YMR025W CLC1P17891 233 aa2.38□□□□□ -2.03
CSI1YMR025W SKN1P33336 771 aa2.38□□□□□ -2.03
CSI1YMR025W TSR2Q06672 205 aaKnown RBP2.38□□□□□ -2.03
CSI1YMR025W YDL114WQ07530 308 aa2.38□□□□□ -2.03
CSI1YMR025W DIS3Q08162 1001 aaKnown RBP2.38□□□□□ -2.03
CSI1YMR025W FCY22Q12119 530 aa2.38□□□□□ -2.03
CSI1YMR025W SRB8P25648 1427 aa2.37□□□□□ -2.03
CSI1YMR025W TY1B-AO13527 1196 aaKnown RBP2.37□□□□□ -2.03
CSI1YMR025W NIP1P32497 812 aaKnown RBP2.37□□□□□ -2.03
CSI1YMR025W PEX22P39718 180 aa2.37□□□□□ -2.03
CSI1YMR025W SPO73P40031 143 aa2.37□□□□□ -2.03
CSI1YMR025W ENT5Q03769 411 aaKnown RBP2.37□□□□□ -2.03
CSI1YMR025W TAF11Q04226 346 aa2.37□□□□□ -2.03
CSI1YMR025W CDC31P06704 161 aaKnown RBP2.36□□□□□ -2.03
CSI1YMR025W STE7P06784 515 aa2.36□□□□□ -2.03
CSI1YMR025W ERG3P32353 365 aa2.36□□□□□ -2.03
CSI1YMR025W RRP46P53256 223 aaPredicted RBP2.36□□□□□ -2.03
CSI1YMR025W MMT1Q03218 510 aa2.36□□□□□ -2.03
CSI1YMR025W YDL199CQ12407 687 aa2.36□□□□□ -2.03
CSI1YMR025W HTZ1Q12692 134 aaKnown RBP2.36□□□□□ -2.03
CSI1YMR025W DNF3Q12674 1656 aa2.36□□□□□ -2.03
CSI1YMR025W FUN26P31381 517 aa2.35□□□□□ -2.03
CSI1YMR025W PDC2P32896 925 aa2.35□□□□□ -2.03
CSI1YMR025W SOL2P37262 315 aa2.35□□□□□ -2.03
CSI1YMR025W MMS4P38257 691 aa2.35□□□□□ -2.03
CSI1YMR025W AIP1P46680 615 aaKnown RBP2.35□□□□□ -2.03
CSI1YMR025W COQ5P49017 307 aa2.35□□□□□ -2.03
CSI1YMR025W ARX1Q03862 593 aaKnown RBP2.35□□□□□ -2.03
CSI1YMR025W HRT1Q08273 121 aa2.35□□□□□ -2.03
CSI1YMR025W HAP1P0CE41 1502 aa2.35□□□□□ -2.03
CSI1YMR025W YRF1-4O13559 1382 aa2.35□□□□□ -2.03
CSI1YMR025W ADE4P04046 510 aaKnown RBP2.34□□□□□ -2.03
CSI1YMR025W WSC4P38739 605 aa2.34□□□□□ -2.03
CSI1YMR025W YIR035CP40579 254 aa2.34□□□□□ -2.03
CSI1YMR025W GPD2P41911 440 aaKnown RBP2.34□□□□□ -2.03
CSI1YMR025W HST4P53688 370 aa2.34□□□□□ -2.03
CSI1YMR025W SKO1Q02100 647 aa2.34□□□□□ -2.03
CSI1YMR025W PGA3Q12746 312 aaKnown RBP2.34□□□□□ -2.03
CSI1YMR025W SSC1P0CS90 654 aaKnown RBP2.33□□□□□ -2.04
CSI1YMR025W GIT1P25346 518 aa2.33□□□□□ -2.04
CSI1YMR025W RAD5P32849 1169 aaPredicted RBP2.33□□□□□ -2.04
CSI1YMR025W JNM1P36224 373 aa2.33□□□□□ -2.04
CSI1YMR025W GAT2P40209 560 aa2.33□□□□□ -2.04
CSI1YMR025W YPS6P40583 537 aa2.33□□□□□ -2.04
CSI1YMR025W SEH1P53011 349 aaKnown RBP2.33□□□□□ -2.04
CSI1YMR025W YHC1Q05900 231 aaKnown RBP2.33□□□□□ -2.04
CSI1YMR025W MCT1Q12283 360 aa2.33□□□□□ -2.04
CSI1YMR025W POM152P39685 1337 aa2.33□□□□□ -2.04
CSI1YMR025W CHC1P22137 1653 aaKnown RBP2.32□□□□□ -2.04
CSI1YMR025W ASP3-2P0CX77 362 aa2.32□□□□□ -2.04
CSI1YMR025W ASP3-3P0CX78 362 aa2.32□□□□□ -2.04
CSI1YMR025W ASP3-4P0CX79 362 aa2.32□□□□□ -2.04
CSI1YMR025W ASP3-1P0CZ17 362 aa2.32□□□□□ -2.04
CSI1YMR025W URA4P20051 364 aa2.32□□□□□ -2.04
CSI1YMR025W REC107P21651 314 aa2.32□□□□□ -2.04
CSI1YMR025W MPE1P35728 441 aaKnown RBP2.32□□□□□ -2.04
CSI1YMR025W NOC2P39744 710 aaKnown RBP2.32□□□□□ -2.04
CSI1YMR025W SRB7P47822 140 aa2.32□□□□□ -2.04
CSI1YMR025W OCA2P53949 197 aa2.32□□□□□ -2.04
CSI1YMR025W KAP120Q02932 1032 aa2.32□□□□□ -2.04
CSI1YMR025W YLR287CQ05881 355 aa2.32□□□□□ -2.04
CSI1YMR025W YOL085CQ99345 113 aa2.32□□□□□ -2.04
CSI1YMR025W COX3P00420 269 aa2.31□□□□□ -2.04
CSI1YMR025W ECM8P38246 354 aa2.31□□□□□ -2.04
CSI1YMR025W VEL1P53058 206 aa2.31□□□□□ -2.04
CSI1YMR025W RRG1Q12167 365 aaPredicted RBP2.31□□□□□ -2.04
CSI1YMR025W VMR1P38735 1592 aa2.31□□□□□ -2.04
CSI1YMR025W TY1B-NL2Q99337 1749 aaKnown RBP2.31□□□□□ -2.04
CSI1YMR025W ATP1P07251 545 aaKnown RBP2.3□□□□□ -2.04
CSI1YMR025W FUR1P18562 216 aaKnown RBP2.3□□□□□ -2.04
CSI1YMR025W NFU1P32860 256 aa2.3□□□□□ -2.04
CSI1YMR025W AST1P35183 429 aa2.3□□□□□ -2.04
CSI1YMR025W SMP1P38128 452 aa2.3□□□□□ -2.04
CSI1YMR025W ECM34P38728 170 aa2.3□□□□□ -2.04
CSI1YMR025W YMR155WQ03795 547 aa2.3□□□□□ -2.04
CSI1YMR025W YMR130WQ04223 302 aa2.3□□□□□ -2.04
CSI1YMR025W YDR115WQ04598 105 aa2.3□□□□□ -2.04
CSI1YMR025W DON1Q05610 365 aa2.3□□□□□ -2.04
CSI1YMR025W DCS1Q06151 350 aa2.3□□□□□ -2.04
CSI1YMR025W SCM3Q12334 223 aa2.3□□□□□ -2.04
CSI1YMR025W SFI1Q12369 946 aa2.3□□□□□ -2.04
CSI1YMR025W ISN1Q99312 450 aa2.3□□□□□ -2.04
CSI1YMR025W KRE5P22023 1365 aa2.3□□□□□ -2.04
CSI1YMR025W CFT1Q06632 1357 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 90.1 ms