RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C MSO1P53604 210 aaKnown RBP4.02□□□□□ -1.77
VPS71YML041C IBD2P53892 351 aa4.02□□□□□ -1.77
VPS71YML041C SPR6Q01684 191 aa4.02□□□□□ -1.77
VPS71YML041C CWC21Q03375 135 aaKnown RBP4.02□□□□□ -1.77
VPS71YML041C RTT103Q05543 409 aa4.02□□□□□ -1.77
VPS71YML041C BCP1Q06338 283 aa4.02□□□□□ -1.77
VPS71YML041C NDE2Q07500 545 aa4.02□□□□□ -1.77
VPS71YML041C RPL18AP0CX49 186 aaKnown RBP4.01□□□□□ -1.77
VPS71YML041C RPL18BP0CX50 186 aaKnown RBP4.01□□□□□ -1.77
VPS71YML041C PHA2P32452 334 aa4.01□□□□□ -1.77
VPS71YML041C VAM7P32912 316 aa4.01□□□□□ -1.77
VPS71YML041C MRPL37P36532 105 aa4.01□□□□□ -1.77
VPS71YML041C YMR262WP38430 313 aa4.01□□□□□ -1.77
VPS71YML041C MDM31P38880 579 aa4.01□□□□□ -1.77
VPS71YML041C BTT1P40314 149 aaPredicted RBP4.01□□□□□ -1.77
VPS71YML041C GCD14P46959 383 aaPredicted RBP4.01□□□□□ -1.77
VPS71YML041C LIA1P47120 325 aaKnown RBP4.01□□□□□ -1.77
VPS71YML041C MND1P53102 219 aa4.01□□□□□ -1.77
VPS71YML041C YNL260CP53846 198 aa4.01□□□□□ -1.77
VPS71YML041C SMP3Q04174 516 aa4.01□□□□□ -1.77
VPS71YML041C APC5Q08683 685 aa4.01□□□□□ -1.77
VPS71YML041C HNT3Q08702 217 aa4.01□□□□□ -1.77
VPS71YML041C NDD1Q08887 554 aa4.01□□□□□ -1.77
VPS71YML041C LDB17Q12342 491 aa4.01□□□□□ -1.77
VPS71YML041C POM152P39685 1337 aa4□□□□□ -1.77
VPS71YML041C RPL24AP04449 155 aaKnown RBP4□□□□□ -1.77
VPS71YML041C GDH1P07262 454 aaKnown RBP4□□□□□ -1.77
VPS71YML041C CAR2P07991 424 aaKnown RBP4□□□□□ -1.77
VPS71YML041C CAP2P13517 287 aa4□□□□□ -1.77
VPS71YML041C HEM15P16622 393 aa4□□□□□ -1.77
VPS71YML041C CKI1P20485 582 aa4□□□□□ -1.77
VPS71YML041C YCL068CP25593 260 aa4□□□□□ -1.77
VPS71YML041C CIN8P27895 1000 aa4□□□□□ -1.77
VPS71YML041C YEF1P32622 495 aa4□□□□□ -1.77
VPS71YML041C TMT1P32643 299 aa4□□□□□ -1.77
VPS71YML041C MCR1P36060 302 aaKnown RBP4□□□□□ -1.77
VPS71YML041C PEX32P38292 413 aa4□□□□□ -1.77
VPS71YML041C YBP1P38315 674 aa4□□□□□ -1.77
VPS71YML041C YJL213WP40896 331 aa4□□□□□ -1.77
VPS71YML041C IDP2P41939 412 aa4□□□□□ -1.77
VPS71YML041C CWC22P53333 577 aaKnown RBP4□□□□□ -1.77
VPS71YML041C RVB1Q03940 463 aaKnown RBP4□□□□□ -1.77
VPS71YML041C CSI1Q04368 295 aa4□□□□□ -1.77
VPS71YML041C RRT8Q08219 342 aa4□□□□□ -1.77
VPS71YML041C AFT2Q08957 416 aa4□□□□□ -1.77
VPS71YML041C TDH1P00360 332 aaKnown RBP3.99□□□□□ -1.77
VPS71YML041C ARF2P19146 181 aaKnown RBP3.99□□□□□ -1.77
VPS71YML041C YUR1P26725 428 aa3.99□□□□□ -1.77
VPS71YML041C VMA5P31412 392 aaKnown RBP3.99□□□□□ -1.77
VPS71YML041C MRP4P32902 394 aa3.99□□□□□ -1.77
VPS71YML041C BUD2P33314 1104 aa3.99□□□□□ -1.77
VPS71YML041C NAT2P37293 288 aa3.99□□□□□ -1.77
VPS71YML041C CHK1P38147 527 aa3.99□□□□□ -1.77
VPS71YML041C BFR1P38934 470 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
VPS71YML041C AGX1P43567 385 aa3.99□□□□□ -1.77
VPS71YML041C SAD1P43589 448 aa3.99□□□□□ -1.77
VPS71YML041C MTM1P53320 366 aa3.99□□□□□ -1.77
VPS71YML041C YGR266WP53326 701 aa3.99□□□□□ -1.77
VPS71YML041C WSC2P53832 503 aa3.99□□□□□ -1.77
VPS71YML041C CCE1Q03702 353 aa3.99□□□□□ -1.77
VPS71YML041C BUR2Q05949 395 aa3.99□□□□□ -1.77
VPS71YML041C GRS2Q06817 618 aa3.99□□□□□ -1.77
VPS71YML041C SNX3Q08826 162 aaKnown RBP3.99□□□□□ -1.77
VPS71YML041C ICT1Q12385 394 aa3.99□□□□□ -1.77
VPS71YML041C PAA1Q12447 191 aaKnown RBP3.99□□□□□ -1.77
VPS71YML041C YPR1Q12458 312 aa3.99□□□□□ -1.77
VPS71YML041C YBR298C-AQ8TGK4 73 aa3.99□□□□□ -1.77
VPS71YML041C YOR338WQ99326 363 aa3.99□□□□□ -1.77
VPS71YML041C MEK1P24719 497 aaPredicted RBP3.98□□□□□ -1.77
VPS71YML041C MXR2P25566 168 aa3.98□□□□□ -1.77
VPS71YML041C RPL5P26321 297 aaKnown RBP3.98□□□□□ -1.77
VPS71YML041C ICL1P28240 557 aaPredicted RBP3.98□□□□□ -1.77
VPS71YML041C ACB1P31787 87 aa3.98□□□□□ -1.77
VPS71YML041C AGA1P32323 725 aa3.98□□□□□ -1.77
VPS71YML041C COT1P32798 439 aa3.98□□□□□ -1.77
VPS71YML041C MRPS5P33759 307 aa3.98□□□□□ -1.77
VPS71YML041C COY1P34237 679 aa3.98□□□□□ -1.77
VPS71YML041C GPX2P38143 162 aa3.98□□□□□ -1.77
VPS71YML041C YHR182WP38870 785 aa3.98□□□□□ -1.77
VPS71YML041C SEC27P41811 889 aaKnown RBP3.98□□□□□ -1.77
VPS71YML041C TRM112P53738 135 aaPredicted RBP3.98□□□□□ -1.77
VPS71YML041C GOR1P53839 350 aa3.98□□□□□ -1.77
VPS71YML041C NAT4Q04751 285 aa3.98□□□□□ -1.77
VPS71YML041C YMR317WQ04893 1140 aa3.98□□□□□ -1.77
VPS71YML041C DNL4Q08387 944 aaPredicted RBP3.98□□□□□ -1.77
VPS71YML041C SLF1Q12034 447 aaKnown RBP3.98□□□□□ -1.77
VPS71YML041C SGT2Q12118 346 aaKnown RBP3.98□□□□□ -1.77
VPS71YML041C MED4Q12343 284 aa3.98□□□□□ -1.77
VPS71YML041C YER078W-AQ3E7A2 54 aa3.98□□□□□ -1.77
VPS71YML041C YCL021W-AQ96VH3 125 aa3.98□□□□□ -1.77
VPS71YML041C CYC3P06182 269 aa3.97□□□□□ -1.77
VPS71YML041C KAR9P32526 644 aa3.97□□□□□ -1.77
VPS71YML041C GEP4P38812 185 aa3.97□□□□□ -1.77
VPS71YML041C RBG1P39729 369 aa3.97□□□□□ -1.77
VPS71YML041C YGR168CP53293 376 aa3.97□□□□□ -1.77
VPS71YML041C GRX3Q03835 250 aa3.97□□□□□ -1.77
VPS71YML041C UBX2Q04228 584 aa3.97□□□□□ -1.77
VPS71YML041C MEX67Q99257 599 aaKnown RBP3.97□□□□□ -1.77
VPS71YML041C CPR1P14832 162 aaKnown RBP3.96□□□□□ -1.78
VPS71YML041C FAR1P21268 830 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms