RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C GIT1P25346 518 aa3□□□□□ -1.93
SMD3YLR147C CHA1P25379 360 aaKnown RBP3□□□□□ -1.93
SMD3YLR147C ECT1P33412 323 aa3□□□□□ -1.93
SMD3YLR147C EFM4P40516 257 aa3□□□□□ -1.93
SMD3YLR147C AIP1P46680 615 aaKnown RBP3□□□□□ -1.93
SMD3YLR147C SEH1P53011 349 aaKnown RBP3□□□□□ -1.93
SMD3YLR147C ECM11Q04110 302 aa3□□□□□ -1.93
SMD3YLR147C PIN3Q06449 215 aa3□□□□□ -1.93
SMD3YLR147C LDS2Q08218 356 aa3□□□□□ -1.93
SMD3YLR147C PCL9Q12477 304 aa3□□□□□ -1.93
SMD3YLR147C RPS18AP0CX55 146 aaKnown RBP2.99□□□□□ -1.93
SMD3YLR147C RPS18BP0CX56 146 aaPredicted RBP2.99□□□□□ -1.93
SMD3YLR147C LSM12P38828 187 aaKnown RBP2.99□□□□□ -1.93
SMD3YLR147C MLH1P38920 769 aa2.99□□□□□ -1.93
SMD3YLR147C CIN2P46670 268 aa2.99□□□□□ -1.93
SMD3YLR147C VHT1P53241 593 aa2.99□□□□□ -1.93
SMD3YLR147C IES4Q08561 116 aa2.99□□□□□ -1.93
SMD3YLR147C MEX67Q99257 599 aaKnown RBP2.99□□□□□ -1.93
SMD3YLR147C PFF1P38244 976 aa2.98□□□□□ -1.93
SMD3YLR147C YHR177WP38867 453 aa2.98□□□□□ -1.93
SMD3YLR147C HEM14P40012 539 aa2.98□□□□□ -1.93
SMD3YLR147C REX2P54964 269 aaKnown RBP2.98□□□□□ -1.93
SMD3YLR147C ENT5Q03769 411 aaKnown RBP2.98□□□□□ -1.93
SMD3YLR147C IPK1Q06667 281 aa2.98□□□□□ -1.93
SMD3YLR147C STE7P06784 515 aa2.97□□□□□ -1.93
SMD3YLR147C CMK2P22517 447 aa2.97□□□□□ -1.93
SMD3YLR147C MNL1P38888 796 aa2.97□□□□□ -1.93
SMD3YLR147C LCB2P40970 561 aa2.97□□□□□ -1.93
SMD3YLR147C VAC7P53950 1165 aa2.97□□□□□ -1.93
SMD3YLR147C KTR6P54070 446 aa2.97□□□□□ -1.93
SMD3YLR147C MSC3Q05812 728 aa2.97□□□□□ -1.93
SMD3YLR147C AAD15Q08361 143 aa2.97□□□□□ -1.93
SMD3YLR147C MSP1P28737 362 aa2.96□□□□□ -1.94
SMD3YLR147C DPH2P32461 534 aa2.96□□□□□ -1.94
SMD3YLR147C SPP381P38282 291 aaPredicted RBP2.96□□□□□ -1.94
SMD3YLR147C SEC27P41811 889 aaKnown RBP2.96□□□□□ -1.94
SMD3YLR147C CTK3P46963 296 aaPredicted RBP2.96□□□□□ -1.94
SMD3YLR147C TRF5P48561 642 aaKnown RBP2.96□□□□□ -1.94
SMD3YLR147C ASN2P49090 572 aaKnown RBP2.96□□□□□ -1.94
SMD3YLR147C YIP5P53108 310 aa2.96□□□□□ -1.94
SMD3YLR147C FLC3P53121 802 aa2.96□□□□□ -1.94
SMD3YLR147C PRP38Q00723 242 aaPredicted RBP2.96□□□□□ -1.94
SMD3YLR147C GAT3Q07928 141 aa2.96□□□□□ -1.94
SMD3YLR147C RRP7P25368 297 aaPredicted RBP2.95□□□□□ -1.94
SMD3YLR147C ZUO1P32527 433 aaKnown RBP2.95□□□□□ -1.94
SMD3YLR147C ANP1P32629 500 aa2.95□□□□□ -1.94
SMD3YLR147C PXA2P34230 853 aa2.95□□□□□ -1.94
SMD3YLR147C LRP1P38801 184 aaKnown RBP2.95□□□□□ -1.94
SMD3YLR147C ATP22P50273 684 aaPredicted RBP2.95□□□□□ -1.94
SMD3YLR147C VPS9P54787 451 aa2.95□□□□□ -1.94
SMD3YLR147C RPL21AQ02753 160 aaKnown RBP2.95□□□□□ -1.94
SMD3YLR147C YLR177WQ06251 628 aa2.95□□□□□ -1.94
SMD3YLR147C MCH1Q07376 486 aa2.95□□□□□ -1.94
SMD3YLR147C SFM1Q12314 213 aa2.95□□□□□ -1.94
SMD3YLR147C RPL21BQ12672 160 aaKnown RBP2.95□□□□□ -1.94
SMD3YLR147C TPI1P00942 248 aaKnown RBP2.94□□□□□ -1.94
SMD3YLR147C TOA1P32773 286 aa2.94□□□□□ -1.94
SMD3YLR147C SOL2P37262 315 aa2.94□□□□□ -1.94
SMD3YLR147C KAP104P38217 918 aaKnown RBP2.94□□□□□ -1.94
SMD3YLR147C CHL4P38907 458 aa2.94□□□□□ -1.94
SMD3YLR147C SEC9P40357 651 aa2.94□□□□□ -1.94
SMD3YLR147C ERO1Q03103 563 aa2.94□□□□□ -1.94
SMD3YLR147C RAX2Q12465 1220 aa2.94□□□□□ -1.94
SMD3YLR147C PAR32Q12515 295 aaKnown RBP2.94□□□□□ -1.94
SMD3YLR147C MNE1P24720 663 aa2.93□□□□□ -1.94
SMD3YLR147C PDC2P32896 925 aa2.93□□□□□ -1.94
SMD3YLR147C DTR1P38125 572 aa2.93□□□□□ -1.94
SMD3YLR147C YJL055WP47044 245 aa2.93□□□□□ -1.94
SMD3YLR147C RSC1P53236 928 aa2.93□□□□□ -1.94
SMD3YLR147C YOR376WQ08900 122 aa2.93□□□□□ -1.94
SMD3YLR147C MAS2P11914 482 aa2.92□□□□□ -1.94
SMD3YLR147C WSC4P38739 605 aa2.92□□□□□ -1.94
SMD3YLR147C ATP16Q12165 160 aa2.92□□□□□ -1.94
SMD3YLR147C HEM4P06174 275 aa2.91□□□□□ -1.94
SMD3YLR147C PUT4P15380 627 aa2.91□□□□□ -1.94
SMD3YLR147C MDL1P33310 695 aa2.91□□□□□ -1.94
SMD3YLR147C BMT2P38278 337 aa2.91□□□□□ -1.94
SMD3YLR147C WSS1P38838 269 aa2.91□□□□□ -1.94
SMD3YLR147C PEX22P39718 180 aa2.91□□□□□ -1.94
SMD3YLR147C YFL012WP43580 148 aa2.91□□□□□ -1.94
SMD3YLR147C YDR115WQ04598 105 aa2.91□□□□□ -1.94
SMD3YLR147C TIR4Q12218 487 aaPredicted RBP2.91□□□□□ -1.94
SMD3YLR147C HIF1Q12373 385 aa2.91□□□□□ -1.94
SMD3YLR147C HMS1Q12398 434 aa2.91□□□□□ -1.94
SMD3YLR147C SRN2Q99176 213 aa2.91□□□□□ -1.94
SMD3YLR147C SMP1P38128 452 aa2.9□□□□□ -1.95
SMD3YLR147C SLX1P38324 304 aa2.9□□□□□ -1.95
SMD3YLR147C FSH2Q05015 223 aa2.9□□□□□ -1.95
SMD3YLR147C YLH47Q06493 454 aa2.9□□□□□ -1.95
SMD3YLR147C YDL109CQ12103 647 aa2.9□□□□□ -1.95
SMD3YLR147C ERP4Q12450 207 aa2.9□□□□□ -1.95
SMD3YLR147C YOL085CQ99345 113 aa2.9□□□□□ -1.95
SMD3YLR147C UNG1P12887 359 aa2.89□□□□□ -1.95
SMD3YLR147C MRPL8P22353 238 aa2.89□□□□□ -1.95
SMD3YLR147C RPL16AP26784 199 aaKnown RBP2.89□□□□□ -1.95
SMD3YLR147C LDS1P31379 325 aa2.89□□□□□ -1.95
SMD3YLR147C YPR078CQ06813 372 aa2.89□□□□□ -1.95
SMD3YLR147C YOR338WQ99326 363 aa2.89□□□□□ -1.95
SMD3YLR147C RPL23AP0CX41 137 aaKnown RBP2.88□□□□□ -1.95
SMD3YLR147C RPL23BP0CX42 137 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms