RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C YPT7P32939 208 aa10.42□□□□□ -0.74
SPT8YLR055C ATG14P38270 344 aa10.42□□□□□ -0.74
SPT8YLR055C AIM10P39965 576 aaKnown RBP10.42□□□□□ -0.74
SPT8YLR055C YEL073CP39974 107 aa10.42□□□□□ -0.74
SPT8YLR055C LSM5P40089 93 aaKnown RBP10.42□□□□□ -0.74
SPT8YLR055C MNN10P50108 393 aaKnown RBP10.42□□□□□ -0.74
SPT8YLR055C YDL109CQ12103 647 aa10.42□□□□□ -0.74
SPT8YLR055C ATP16Q12165 160 aa10.42□□□□□ -0.74
SPT8YLR055C IDH2P28241 369 aaKnown RBP10.41□□□□□ -0.74
SPT8YLR055C SNC1P31109 117 aa10.41□□□□□ -0.74
SPT8YLR055C ATP11P32453 318 aa10.41□□□□□ -0.74
SPT8YLR055C STP2P38704 541 aa10.41□□□□□ -0.74
SPT8YLR055C PFS1P38872 237 aa10.41□□□□□ -0.74
SPT8YLR055C MBP1P39678 833 aa10.41□□□□□ -0.74
SPT8YLR055C TIM54P47045 478 aa10.41□□□□□ -0.74
SPT8YLR055C YJR149WP47177 404 aa10.41□□□□□ -0.74
SPT8YLR055C RTS3P53289 263 aa10.41□□□□□ -0.74
SPT8YLR055C BUD17P53727 317 aa10.41□□□□□ -0.74
SPT8YLR055C OAZ1Q02803 292 aa10.41□□□□□ -0.74
SPT8YLR055C FRE5Q08908 694 aa10.41□□□□□ -0.74
SPT8YLR055C INH1P01097 85 aa10.4□□□□□ -0.74
SPT8YLR055C FUM1P08417 488 aaKnown RBP10.4□□□□□ -0.74
SPT8YLR055C PET54P10834 293 aa10.4□□□□□ -0.74
SPT8YLR055C DBP2P24783 546 aaKnown RBP10.4□□□□□ -0.74
SPT8YLR055C SLM5P25345 492 aaKnown RBP10.4□□□□□ -0.74
SPT8YLR055C LST4P34239 828 aa10.4□□□□□ -0.74
SPT8YLR055C WSC4P38739 605 aa10.4□□□□□ -0.74
SPT8YLR055C QDR2P40474 542 aa10.4□□□□□ -0.74
SPT8YLR055C ZRG17P53735 605 aa10.4□□□□□ -0.74
SPT8YLR055C RIM13Q03792 727 aa10.4□□□□□ -0.74
SPT8YLR055C PDR8Q06149 701 aa10.4□□□□□ -0.74
SPT8YLR055C GPN3Q06543 272 aa10.4□□□□□ -0.74
SPT8YLR055C VPS68Q12016 184 aa10.4□□□□□ -0.74
SPT8YLR055C COX3P00420 269 aa10.4□□□□□ -0.75
SPT8YLR055C SPS2P08459 502 aa10.4□□□□□ -0.75
SPT8YLR055C MCM1P11746 286 aa10.4□□□□□ -0.75
SPT8YLR055C NAR1P23503 491 aaKnown RBP10.4□□□□□ -0.75
SPT8YLR055C RSC6P25632 483 aa10.4□□□□□ -0.75
SPT8YLR055C VMA8P32610 256 aaKnown RBP10.4□□□□□ -0.75
SPT8YLR055C APT2P36973 181 aa10.4□□□□□ -0.75
SPT8YLR055C YBR063CP38083 404 aa10.4□□□□□ -0.75
SPT8YLR055C INM1P38710 295 aa10.4□□□□□ -0.75
SPT8YLR055C RRP4P38792 359 aaKnown RBP10.4□□□□□ -0.75
SPT8YLR055C PLB1P39105 664 aa10.4□□□□□ -0.75
SPT8YLR055C HPA3P39979 161 aa10.4□□□□□ -0.75
SPT8YLR055C VPS73P53142 486 aaKnown RBP10.4□□□□□ -0.75
SPT8YLR055C IMO32P53219 342 aa10.4□□□□□ -0.75
SPT8YLR055C YSA1Q01976 231 aa10.4□□□□□ -0.75
SPT8YLR055C GAD1Q04792 585 aa10.4□□□□□ -0.75
SPT8YLR055C YLR346CQ06139 101 aa10.4□□□□□ -0.75
SPT8YLR055C YLR173WQ06247 608 aa10.4□□□□□ -0.75
SPT8YLR055C ASR1Q06834 288 aa10.4□□□□□ -0.75
SPT8YLR055C TEN1Q07921 160 aa10.4□□□□□ -0.75
SPT8YLR055C MTR10Q99189 972 aa10.4□□□□□ -0.75
SPT8YLR055C PUP1P25043 261 aa10.39□□□□□ -0.75
SPT8YLR055C MRPL3P36516 390 aa10.39□□□□□ -0.75
SPT8YLR055C ZTA1P38230 334 aaKnown RBP10.39□□□□□ -0.75
SPT8YLR055C TAT2P38967 592 aa10.39□□□□□ -0.75
SPT8YLR055C HXT9P40885 567 aa10.39□□□□□ -0.75
SPT8YLR055C ALB1P47019 175 aaPredicted RBP10.39□□□□□ -0.75
SPT8YLR055C ERV29P53337 310 aa10.39□□□□□ -0.75
SPT8YLR055C TPS1Q00764 495 aaKnown RBP10.39□□□□□ -0.75
SPT8YLR055C TDA1Q03533 586 aa10.39□□□□□ -0.75
SPT8YLR055C YLR283WQ05867 314 aa10.39□□□□□ -0.75
SPT8YLR055C VID22Q05934 901 aa10.39□□□□□ -0.75
SPT8YLR055C BUR2Q05949 395 aa10.39□□□□□ -0.75
SPT8YLR055C TFB4Q12004 338 aa10.39□□□□□ -0.75
SPT8YLR055C AI4P03878 556 aa10.38□□□□□ -0.75
SPT8YLR055C TRX3P25372 127 aa10.38□□□□□ -0.75
SPT8YLR055C HOM6P31116 359 aaKnown RBP10.38□□□□□ -0.75
SPT8YLR055C CBP4P37267 147 aa10.38□□□□□ -0.75
SPT8YLR055C MCM7P38132 845 aa10.38□□□□□ -0.75
SPT8YLR055C NAB3P38996 802 aaKnown RBP RIP-Chip data10.38□□□□□ -0.75not detected
SPT8YLR055C TIR3P40552 269 aa10.38□□□□□ -0.75
SPT8YLR055C APS3P47064 194 aa10.38□□□□□ -0.75
SPT8YLR055C SWF1Q04629 336 aa10.38□□□□□ -0.75
SPT8YLR055C PLB3Q08108 686 aa10.38□□□□□ -0.75
SPT8YLR055C YOR283WQ12040 230 aaKnown RBP10.38□□□□□ -0.75
SPT8YLR055C YPL066WQ12194 479 aa10.38□□□□□ -0.75
SPT8YLR055C SFG1Q12507 346 aa10.38□□□□□ -0.75
SPT8YLR055C SIR2P06700 562 aa10.37□□□□□ -0.75
SPT8YLR055C RED1P14291 827 aa10.37□□□□□ -0.75
SPT8YLR055C YCR102CP25608 368 aa10.37□□□□□ -0.75
SPT8YLR055C SNU114P36048 1008 aaKnown RBP10.37□□□□□ -0.75
SPT8YLR055C RPF2P36160 344 aaKnown RBP10.37□□□□□ -0.75
SPT8YLR055C YRO2P38079 344 aa10.37□□□□□ -0.75
SPT8YLR055C YHR177WP38867 453 aa10.37□□□□□ -0.75
SPT8YLR055C RCY1P39531 840 aa10.37□□□□□ -0.75
SPT8YLR055C FMC1P40491 155 aa10.37□□□□□ -0.75
SPT8YLR055C CHA4P43634 648 aa10.37□□□□□ -0.75
SPT8YLR055C ECM27P47144 725 aa10.37□□□□□ -0.75
SPT8YLR055C BUD9P53226 547 aa10.37□□□□□ -0.75
SPT8YLR055C YFT2Q06676 274 aa10.37□□□□□ -0.75
SPT8YLR055C DCI1Q08558 271 aa10.37□□□□□ -0.75
SPT8YLR055C STT4P37297 1900 aa10.37□□□□□ -0.75
SPT8YLR055C CMP2P14747 604 aa10.37□□□□□ -0.75
SPT8YLR055C QRI7P43122 407 aa10.37□□□□□ -0.75
SPT8YLR055C MPS2P53159 387 aa10.37□□□□□ -0.75
SPT8YLR055C AAT1Q01802 451 aa10.37□□□□□ -0.75
SPT8YLR055C TPO3Q06451 622 aa10.37□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 52.1 ms