RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C SLX1P38324 304 aa3.58□□□□□ -1.84
SED5YLR026C YHK8P38776 514 aa3.58□□□□□ -1.84
SED5YLR026C TRM44Q02648 567 aaKnown RBP3.58□□□□□ -1.84
SED5YLR026C VPS72Q03388 795 aa3.58□□□□□ -1.84
SED5YLR026C TDA1Q03533 586 aa3.58□□□□□ -1.84
SED5YLR026C NCA2Q12374 616 aa3.58□□□□□ -1.84
SED5YLR026C NIP1P32497 812 aaKnown RBP3.57□□□□□ -1.84
SED5YLR026C NFU1P32860 256 aa3.57□□□□□ -1.84
SED5YLR026C BYE1P36106 594 aa3.57□□□□□ -1.84
SED5YLR026C PGU1P47180 361 aa3.57□□□□□ -1.84
SED5YLR026C MKC7P53379 596 aa3.57□□□□□ -1.84
SED5YLR026C RMT2Q03305 412 aa3.57□□□□□ -1.84
SED5YLR026C SMC5Q08204 1093 aa3.57□□□□□ -1.84
SED5YLR026C DNL4Q08387 944 aaPredicted RBP3.57□□□□□ -1.84
SED5YLR026C YPQ1Q12010 308 aa3.57□□□□□ -1.84
SED5YLR026C EAF3Q12432 401 aa3.57□□□□□ -1.84
SED5YLR026C HPR1P17629 752 aaKnown RBP3.56□□□□□ -1.84
SED5YLR026C FUR1P18562 216 aaKnown RBP3.56□□□□□ -1.84
SED5YLR026C CDC50P25656 391 aa3.56□□□□□ -1.84
SED5YLR026C HEL1P36113 551 aa3.56□□□□□ -1.84
SED5YLR026C OM14P38325 134 aa3.56□□□□□ -1.84
SED5YLR026C PTI1P39927 425 aaPredicted RBP3.56□□□□□ -1.84
SED5YLR026C TOS3P43637 560 aa3.56□□□□□ -1.84
SED5YLR026C COS1P53822 381 aa3.56□□□□□ -1.84
SED5YLR026C YMR102CQ03177 834 aa3.56□□□□□ -1.84
SED5YLR026C MMT1Q03218 510 aa3.56□□□□□ -1.84
SED5YLR026C MMR1Q06324 491 aa3.56□□□□□ -1.84
SED5YLR026C DIB1Q06819 143 aaPredicted RBP3.56□□□□□ -1.84
SED5YLR026C MFG1Q07684 458 aa3.56□□□□□ -1.84
SED5YLR026C CMS1Q07897 291 aaKnown RBP3.56□□□□□ -1.84
SED5YLR026C SCM3Q12334 223 aa3.56□□□□□ -1.84
SED5YLR026C ERV1P27882 189 aa3.55□□□□□ -1.84
SED5YLR026C HSP104P31539 908 aaKnown RBP3.55□□□□□ -1.84
SED5YLR026C MAM33P40513 266 aa3.55□□□□□ -1.84
SED5YLR026C YPS6P40583 537 aa3.55□□□□□ -1.84
SED5YLR026C YGR018CP53211 109 aa3.55□□□□□ -1.84
SED5YLR026C ARO3P14843 370 aaKnown RBP3.54□□□□□ -1.84
SED5YLR026C ANR2P36090 516 aaPredicted RBP3.54□□□□□ -1.84
SED5YLR026C CHS6P40955 746 aa3.54□□□□□ -1.84
SED5YLR026C YGR117CP53270 476 aa3.54□□□□□ -1.84
SED5YLR026C NAG1Q8TGN9 163 aa3.54□□□□□ -1.84
SED5YLR026C ADK2P26364 225 aa3.53□□□□□ -1.84
SED5YLR026C URA7P28274 579 aaKnown RBP3.53□□□□□ -1.84
SED5YLR026C CYS4P32582 507 aaKnown RBP3.53□□□□□ -1.84
SED5YLR026C MRPS9P38120 278 aa3.53□□□□□ -1.84
SED5YLR026C SLM4P38247 162 aa3.53□□□□□ -1.84
SED5YLR026C TIM17P39515 158 aa3.53□□□□□ -1.84
SED5YLR026C NOC2P39744 710 aaKnown RBP3.53□□□□□ -1.84
SED5YLR026C YER079WP40052 210 aaKnown RBP3.53□□□□□ -1.84
SED5YLR026C RPT4P53549 437 aaKnown RBP3.53□□□□□ -1.84
SED5YLR026C ECM11Q04110 302 aa3.53□□□□□ -1.84
SED5YLR026C VPS54Q12071 889 aa3.53□□□□□ -1.84
SED5YLR026C MTR10Q99189 972 aa3.53□□□□□ -1.84
SED5YLR026C AUS1Q08409 1394 aa3.52□□□□□ -1.85
SED5YLR026C TAO3P40468 2376 aa3.52□□□□□ -1.85
SED5YLR026C ADH1P00330 348 aaKnown RBP3.52□□□□□ -1.85
SED5YLR026C PIS1P06197 220 aaKnown RBP3.52□□□□□ -1.85
SED5YLR026C SER3P40054 469 aa3.52□□□□□ -1.85
SED5YLR026C YNL208WP40159 199 aaKnown RBP3.52□□□□□ -1.85
SED5YLR026C GAT2P40209 560 aa3.52□□□□□ -1.85
SED5YLR026C YPS5P53057 165 aa3.52□□□□□ -1.85
SED5YLR026C ALE1Q08548 619 aa3.52□□□□□ -1.85
SED5YLR026C ASC1P38011 319 aaKnown RBP3.51□□□□□ -1.85
SED5YLR026C GPI18P38211 433 aa3.51□□□□□ -1.85
SED5YLR026C PFS1P38872 237 aa3.51□□□□□ -1.85
SED5YLR026C CLD1P53264 445 aa3.51□□□□□ -1.85
SED5YLR026C HOT1Q03213 719 aa3.51□□□□□ -1.85
SED5YLR026C RPN9Q04062 393 aaKnown RBP3.51□□□□□ -1.85
SED5YLR026C LOT6Q07923 191 aa3.51□□□□□ -1.85
SED5YLR026C IES4Q08561 116 aa3.51□□□□□ -1.85
SED5YLR026C DST1P07273 309 aa3.5□□□□□ -1.85
SED5YLR026C STP2P38704 541 aa3.5□□□□□ -1.85
SED5YLR026C VHS2P40463 436 aa3.5□□□□□ -1.85
SED5YLR026C CAK1P43568 368 aaPredicted RBP3.5□□□□□ -1.85
SED5YLR026C RRP46P53256 223 aaPredicted RBP3.5□□□□□ -1.85
SED5YLR026C ALF1P53904 254 aa3.5□□□□□ -1.85
SED5YLR026C ERB1Q04660 807 aaKnown RBP3.5□□□□□ -1.85
SED5YLR026C MED2Q12124 431 aa3.5□□□□□ -1.85
SED5YLR026C YCR024C-BQ3E7Z8 88 aa3.5□□□□□ -1.85
SED5YLR026C CBP6P07253 162 aaPredicted RBP3.49□□□□□ -1.85
SED5YLR026C PRB1P09232 635 aa3.49□□□□□ -1.85
SED5YLR026C SSC1P0CS90 654 aaKnown RBP3.49□□□□□ -1.85
SED5YLR026C ALD5P40047 520 aaKnown RBP3.49□□□□□ -1.85
SED5YLR026C SRB7P47822 140 aa3.49□□□□□ -1.85
SED5YLR026C TOM22P49334 152 aa3.49□□□□□ -1.85
SED5YLR026C SKI8Q02793 397 aaPredicted RBP3.49□□□□□ -1.85
SED5YLR026C ATP1P07251 545 aaKnown RBP3.48□□□□□ -1.85
SED5YLR026C YGL262WP53054 175 aa3.48□□□□□ -1.85
SED5YLR026C PRP42Q03776 544 aaKnown RBP3.48□□□□□ -1.85
SED5YLR026C YDR131CQ03899 556 aa3.48□□□□□ -1.85
SED5YLR026C YPR091CQ06833 770 aa3.48□□□□□ -1.85
SED5YLR026C CEX1Q12453 761 aa3.48□□□□□ -1.85
SED5YLR026C ZRC1P20107 442 aa3.47□□□□□ -1.85
SED5YLR026C YEF1P32622 495 aa3.47□□□□□ -1.85
SED5YLR026C SKN1P33336 771 aa3.47□□□□□ -1.85
SED5YLR026C MMF1P40185 145 aaKnown RBP3.47□□□□□ -1.85
SED5YLR026C SPR6Q01684 191 aa3.47□□□□□ -1.85
SED5YLR026C PRM6Q04705 352 aa3.47□□□□□ -1.85
SED5YLR026C LYS2P07702 1392 aa3.47□□□□□ -1.85
SED5YLR026C CDC21P06785 304 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms