RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C SRP1Q02821 542 aaKnown RBP9.35□□□□□ -0.91
SHB17YKR043C YDR541CQ03049 344 aa9.35□□□□□ -0.91
SHB17YKR043C KRE28Q04431 385 aa9.35□□□□□ -0.91
SHB17YKR043C YLR446WQ06204 433 aa9.35□□□□□ -0.91
SHB17YKR043C ARO10Q06408 635 aa9.35□□□□□ -0.91
SHB17YKR043C CWH43P25618 953 aa9.34□□□□□ -0.91
SHB17YKR043C YBR241CP38142 488 aa9.34□□□□□ -0.91
SHB17YKR043C GRE3P38715 327 aaKnown RBP RIP-Chip data9.34□□□□□ -0.91not detected
SHB17YKR043C ECM34P38728 170 aa9.34□□□□□ -0.91
SHB17YKR043C TDA11P38854 504 aa9.34□□□□□ -0.91
SHB17YKR043C ECO1P43605 281 aa9.34□□□□□ -0.91
SHB17YKR043C TOS2P50078 622 aa9.34□□□□□ -0.91
SHB17YKR043C DBP6P53734 629 aaKnown RBP9.34□□□□□ -0.91
SHB17YKR043C YNL095CP53932 642 aa9.34□□□□□ -0.91
SHB17YKR043C SPR6Q01684 191 aa9.34□□□□□ -0.91
SHB17YKR043C FMP40Q08968 688 aaPredicted RBP9.34□□□□□ -0.91
SHB17YKR043C YOR214CQ12282 236 aa9.34□□□□□ -0.91
SHB17YKR043C RPL24AP04449 155 aaKnown RBP9.33□□□□□ -0.92
SHB17YKR043C ADE5,7P07244 802 aaKnown RBP9.33□□□□□ -0.92
SHB17YKR043C NCP1P16603 691 aaKnown RBP9.33□□□□□ -0.92
SHB17YKR043C YCK1P23291 538 aa9.33□□□□□ -0.92
SHB17YKR043C YPT7P32939 208 aa9.33□□□□□ -0.92
SHB17YKR043C LOT5P34234 306 aa9.33□□□□□ -0.92
SHB17YKR043C MET28P40573 187 aa9.33□□□□□ -0.92
SHB17YKR043C SNM1P40993 198 aa9.33□□□□□ -0.92
SHB17YKR043C DIM1P41819 318 aaKnown RBP9.33□□□□□ -0.92
SHB17YKR043C RPE1P46969 238 aa9.33□□□□□ -0.92
SHB17YKR043C COS6P53344 381 aa9.33□□□□□ -0.92
SHB17YKR043C CUZ1P53899 274 aa9.33□□□□□ -0.92
SHB17YKR043C PFA5Q03289 374 aa9.33□□□□□ -0.92
SHB17YKR043C PRP3Q03338 469 aaPredicted RBP9.33□□□□□ -0.92
SHB17YKR043C ERB1Q04660 807 aaKnown RBP9.33□□□□□ -0.92
SHB17YKR043C DCR2Q05924 578 aa9.33□□□□□ -0.92
SHB17YKR043C YRM1Q12340 786 aa9.33□□□□□ -0.92
SHB17YKR043C STE6P12866 1290 aa9.32□□□□□ -0.92
SHB17YKR043C ERD1P16151 362 aa9.32□□□□□ -0.92
SHB17YKR043C NTG1P31378 399 aa9.32□□□□□ -0.92
SHB17YKR043C NSG1P38837 291 aa9.32□□□□□ -0.92
SHB17YKR043C RBG1P39729 369 aa9.32□□□□□ -0.92
SHB17YKR043C RPS26AP39938 119 aaKnown RBP9.32□□□□□ -0.92
SHB17YKR043C RPS26BP39939 119 aaKnown RBP9.32□□□□□ -0.92
SHB17YKR043C VNX1P42839 908 aa9.32□□□□□ -0.92
SHB17YKR043C YFL066CP43538 392 aa9.32□□□□□ -0.92
SHB17YKR043C ILM1P47155 203 aa9.32□□□□□ -0.92
SHB17YKR043C LSG1P53145 640 aaKnown RBP9.32□□□□□ -0.92
SHB17YKR043C SYF2P53277 215 aaPredicted RBP9.32□□□□□ -0.92
SHB17YKR043C PBP1P53297 722 aaKnown RBP9.32□□□□□ -0.92
SHB17YKR043C FDC1Q03034 503 aa9.32□□□□□ -0.92
SHB17YKR043C URC2Q04411 772 aa9.32□□□□□ -0.92
SHB17YKR043C DBP9Q06218 594 aaKnown RBP9.32□□□□□ -0.92
SHB17YKR043C ARV1Q06541 321 aa9.32□□□□□ -0.92
SHB17YKR043C YDL218WQ07629 317 aa9.32□□□□□ -0.92
SHB17YKR043C YDL211CQ12121 372 aa9.32□□□□□ -0.92
SHB17YKR043C TSC13Q99190 310 aa9.32□□□□□ -0.92
SHB17YKR043C PRP8P33334 2413 aaKnown RBP9.31□□□□□ -0.92
SHB17YKR043C TIM9O74700 87 aa9.31□□□□□ -0.92
SHB17YKR043C ERG8P24521 451 aa9.31□□□□□ -0.92
SHB17YKR043C RER1P25560 188 aa9.31□□□□□ -0.92
SHB17YKR043C GDH2P33327 1092 aaKnown RBP9.31□□□□□ -0.92
SHB17YKR043C NUF2P33895 451 aa9.31□□□□□ -0.92
SHB17YKR043C YEL057CP39983 233 aa9.31□□□□□ -0.92
SHB17YKR043C SOK1P40317 901 aa9.31□□□□□ -0.92
SHB17YKR043C PGU1P47180 361 aa9.31□□□□□ -0.92
SHB17YKR043C PDR16P53860 351 aaKnown RBP9.31□□□□□ -0.92
SHB17YKR043C PLM2Q04383 521 aa9.31□□□□□ -0.92
SHB17YKR043C RRG7Q08774 242 aaPredicted RBP9.31□□□□□ -0.92
SHB17YKR043C NPC2Q12408 173 aa9.31□□□□□ -0.92
SHB17YKR043C RPB10P22139 70 aa9.3□□□□□ -0.92
SHB17YKR043C GSH1P32477 678 aa9.3□□□□□ -0.92
SHB17YKR043C RPN2P32565 945 aaKnown RBP9.3□□□□□ -0.92
SHB17YKR043C SEC61P32915 480 aa9.3□□□□□ -0.92
SHB17YKR043C YNL208WP40159 199 aaKnown RBP9.3□□□□□ -0.92
SHB17YKR043C YNL195CP40168 261 aa9.3□□□□□ -0.92
SHB17YKR043C LEM3P42838 414 aa9.3□□□□□ -0.92
SHB17YKR043C RHO5P53879 331 aaKnown RBP9.3□□□□□ -0.92
SHB17YKR043C GIS1Q03833 894 aa9.3□□□□□ -0.92
SHB17YKR043C MRX4Q12467 430 aa9.3□□□□□ -0.92
SHB17YKR043C SUI3P09064 285 aaKnown RBP9.29□□□□□ -0.92
SHB17YKR043C GRR1P24814 1151 aa9.29□□□□□ -0.92
SHB17YKR043C TPO5P36029 618 aa9.29□□□□□ -0.92
SHB17YKR043C YHR097CP38809 366 aaKnown RBP9.29□□□□□ -0.92
SHB17YKR043C YHR219WP38900 624 aa9.29□□□□□ -0.92
SHB17YKR043C TAT2P38967 592 aa9.29□□□□□ -0.92
SHB17YKR043C SWD1P39706 426 aa9.29□□□□□ -0.92
SHB17YKR043C NUP57P48837 541 aa9.29□□□□□ -0.92
SHB17YKR043C MPC1P53157 130 aaKnown RBP9.29□□□□□ -0.92
SHB17YKR043C TPS1Q00764 495 aaKnown RBP9.29□□□□□ -0.92
SHB17YKR043C RRN5Q02983 363 aa9.29□□□□□ -0.92
SHB17YKR043C RSN1Q03516 953 aa9.29□□□□□ -0.92
SHB17YKR043C MIX14Q04341 121 aa9.29□□□□□ -0.92
SHB17YKR043C TRA1P38811 3744 aa9.29□□□□□ -0.92
SHB17YKR043C GLT1Q12680 2145 aaKnown RBP9.29□□□□□ -0.92
SHB17YKR043C PET9P18239 318 aaKnown RBP9.28□□□□□ -0.92
SHB17YKR043C RAD51P25454 400 aa9.28□□□□□ -0.92
SHB17YKR043C SAC1P32368 623 aaKnown RBP9.28□□□□□ -0.92
SHB17YKR043C SIC1P38634 284 aa9.28□□□□□ -0.92
SHB17YKR043C RCY1P39531 840 aa9.28□□□□□ -0.92
SHB17YKR043C YJL193WP39542 402 aa9.28□□□□□ -0.92
SHB17YKR043C YFR054CP43622 192 aa9.28□□□□□ -0.92
SHB17YKR043C GPI8P49018 411 aa9.28□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 63.4 ms