RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDR1	YGR100W	PRP45	P28004	379 aa	Predicted RBP	4.36	□□□□□ -1.71
MDR1	YGR100W	NTH1	P32356	751 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	TCA17	P32613	152 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	FRE2	P36033	711 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	HSL7	P38274	827 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	IKI1	P38874	309 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	UIP3	P39547	235 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	YAR028W	P39548	234 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	YCK3	P39962	524 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	HIS6	P40545	261 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	SSY5	P47002	699 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	ASN2	P49090	572 aa	Known RBP	4.36	□□□□□ -1.71
MDR1	YGR100W	RPL9B	P51401	191 aa	Known RBP	4.36	□□□□□ -1.71
MDR1	YGR100W	SWC4	P53201	476 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	YGR250C	P53316	781 aa	Known RBP	4.36	□□□□□ -1.71
MDR1	YGR100W	STD1	Q02794	444 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	BDS1	Q08347	646 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	MTR10	Q99189	972 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	SPS2	P08459	502 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	RPL4A	P10664	362 aa	Known RBP	4.36	□□□□□ -1.71
MDR1	YGR100W	FUN14	P18411	198 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	MNE1	P24720	663 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	RPL8B	P29453	256 aa	Known RBP	4.36	□□□□□ -1.71
MDR1	YGR100W	FAA1	P30624	700 aa	Known RBP	4.36	□□□□□ -1.71
MDR1	YGR100W	HMX1	P32339	317 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	HPA3	P39979	161 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	MMF1	P40185	145 aa	Known RBP	4.36	□□□□□ -1.71
MDR1	YGR100W	ARF3	P40994	183 aa	RIP-Chip data	4.36	□□□□□ -1.71	RIP-Chip
MDR1	YGR100W	MPS3	P47069	682 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	RPL4B	P49626	362 aa	Known RBP	4.36	□□□□□ -1.71
MDR1	YGR100W	STR3	P53101	465 aa	Known RBP	4.36	□□□□□ -1.71
MDR1	YGR100W	NQM1	P53228	333 aa	Predicted RBP	4.36	□□□□□ -1.71
MDR1	YGR100W	YNR065C	P53751	1116 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	GPD1	Q00055	391 aa	Known RBP	4.36	□□□□□ -1.71
MDR1	YGR100W	MRPS16	Q02608	121 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	SKY1	Q03656	742 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	YDR248C	Q03786	193 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	SMA2	Q04658	369 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	DFG5	Q05031	458 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	GAS2	Q06135	555 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	YLR326W	Q06170	240 aa	Known RBP	4.36	□□□□□ -1.71
MDR1	YGR100W	MRI1	Q06489	411 aa	Known RBP	4.36	□□□□□ -1.71
MDR1	YGR100W	LDB18	Q07887	179 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	HRD1	Q08109	551 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	RGT2	Q12300	763 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	SLH1	P53327	1967 aa	Known RBP	4.36	□□□□□ -1.71
MDR1	YGR100W	MYO1	P08964	1928 aa		4.36	□□□□□ -1.71
MDR1	YGR100W	THP2	O13539	261 aa	Known RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	GAP1	P19145	602 aa	Predicted RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	SAT4	P25333	603 aa	Known RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	YCR102C	P25608	368 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	CAT2	P32796	670 aa	Known RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	GMH1	P36125	273 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	ROT2	P38138	954 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	FIG4	P42837	879 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	YJR107W	P47145	328 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	YJR154W	P47181	346 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	PKP2	P53170	491 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	SLX9	P53251	210 aa	Predicted RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	TIM8	P57744	87 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	YVH1	Q02256	364 aa	Known RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	SEC13	Q04491	297 aa	Known RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	ISR1	Q06098	443 aa	Known RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
MDR1	YGR100W	YPL066W	Q12194	479 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	EAF3	Q12432	401 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	PRM4	Q12498	284 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	YPR145C-A	Q2V2P0	78 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	Q0142	Q9ZZW4	58 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	FKS1	P38631	1876 aa	Known RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	CYC1	P00044	109 aa	Predicted RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	SSA3	P09435	649 aa	Known RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	ASP3-2	P0CX77	362 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	ASP3-3	P0CX78	362 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	ASP3-4	P0CX79	362 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	ASP3-1	P0CZ17	362 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	RPB3	P16370	318 aa	Known RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	MAG1	P22134	296 aa	Known RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	PUP3	P25451	205 aa	Known RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	DCC1	P25559	380 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	GID7	P25569	745 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	IMG1	P25626	169 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	WBP1	P33767	430 aa	Known RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	FMO1	P38866	432 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	YMR144W	P40214	342 aa	Known RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	PGD1	P40356	397 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	MET28	P40573	187 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	FPK1	P53739	893 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	YAP6	Q03935	383 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	DOT1	Q04089	582 aa	Known RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	ECM30	Q06673	1274 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	SWC7	Q06707	132 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	PKH2	Q12236	1081 aa	Known RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	HRP1	Q99383	534 aa	Known RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	ILV1	P00927	576 aa	Known RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	SWI5	P08153	709 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	GUK1	P15454	187 aa	Known RBP	4.35	□□□□□ -1.71
MDR1	YGR100W	YCL002C	P25565	263 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	SHP1	P34223	423 aa		4.35	□□□□□ -1.71
MDR1	YGR100W	NIT2	P47016	307 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 22 ms