RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W YOR342CQ12182 319 aa5.9□□□□□ -1.46
MSP1YGR028W PRS5Q12265 496 aaKnown RBP5.9□□□□□ -1.46
MSP1YGR028W RRP36Q12481 300 aaPredicted RBP5.9□□□□□ -1.46
MSP1YGR028W FAS1P07149 2051 aaKnown RBP5.89□□□□□ -1.47
MSP1YGR028W SIR3P06701 978 aa5.89□□□□□ -1.47
MSP1YGR028W YSF3P0C074 85 aaPredicted RBP5.89□□□□□ -1.47
MSP1YGR028W RPC19P28000 142 aaKnown RBP5.89□□□□□ -1.47
MSP1YGR028W SSH4P32343 579 aa5.89□□□□□ -1.47
MSP1YGR028W SEC17P32602 292 aa5.89□□□□□ -1.47
MSP1YGR028W PMT4P46971 762 aa5.89□□□□□ -1.47
MSP1YGR028W CUS2P53830 285 aaPredicted RBP5.89□□□□□ -1.47
MSP1YGR028W YNL092WP53934 400 aa5.89□□□□□ -1.47
MSP1YGR028W IRC15Q02733 499 aa5.89□□□□□ -1.47
MSP1YGR028W YMR010WQ03687 405 aa5.89□□□□□ -1.47
MSP1YGR028W FAR10Q06001 478 aa5.89□□□□□ -1.47
MSP1YGR028W SGT1Q08446 395 aa5.89□□□□□ -1.47
MSP1YGR028W DIA2Q08496 732 aaPredicted RBP5.89□□□□□ -1.47
MSP1YGR028W YTM1Q12024 460 aaPredicted RBP5.89□□□□□ -1.47
MSP1YGR028W RAS2P01120 322 aaKnown RBP5.88□□□□□ -1.47
MSP1YGR028W CBP2P03874 630 aaPredicted RBP5.88□□□□□ -1.47
MSP1YGR028W ARG81P05085 880 aa5.88□□□□□ -1.47
MSP1YGR028W DAP2P18962 818 aa5.88□□□□□ -1.47
MSP1YGR028W CAT2P32796 670 aaKnown RBP5.88□□□□□ -1.47
MSP1YGR028W MSN2P33748 704 aa5.88□□□□□ -1.47
MSP1YGR028W FES1P38260 290 aa5.88□□□□□ -1.47
MSP1YGR028W HSM3P38348 480 aa5.88□□□□□ -1.47
MSP1YGR028W YEL057CP39983 233 aa5.88□□□□□ -1.47
MSP1YGR028W RET2P43621 546 aa5.88□□□□□ -1.47
MSP1YGR028W ALB1P47019 175 aaPredicted RBP5.88□□□□□ -1.47
MSP1YGR028W NAS6P50086 228 aa5.88□□□□□ -1.47
MSP1YGR028W ATP22P50273 684 aaPredicted RBP5.88□□□□□ -1.47
MSP1YGR028W MRM2P53123 320 aa5.88□□□□□ -1.47
MSP1YGR028W MTL1P53214 551 aa5.88□□□□□ -1.47
MSP1YGR028W RHO4Q00246 291 aa5.88□□□□□ -1.47
MSP1YGR028W YPL071CQ02864 156 aa5.88□□□□□ -1.47
MSP1YGR028W ECM11Q04110 302 aa5.88□□□□□ -1.47
MSP1YGR028W VPS74Q06385 345 aa5.88□□□□□ -1.47
MSP1YGR028W FMP45Q07651 309 aa5.88□□□□□ -1.47
MSP1YGR028W ATG34Q12292 412 aa5.88□□□□□ -1.47
MSP1YGR028W JLP1Q12358 412 aa5.88□□□□□ -1.47
MSP1YGR028W SNF8Q12483 233 aa5.88□□□□□ -1.47
MSP1YGR028W SKS1Q12505 502 aa5.88□□□□□ -1.47
MSP1YGR028W NOT5Q12514 560 aaPredicted RBP5.88□□□□□ -1.47
MSP1YGR028W YPR096CO13587 100 aa5.87□□□□□ -1.47
MSP1YGR028W RPL20AP0CX23 172 aaKnown RBP5.87□□□□□ -1.47
MSP1YGR028W RPL20BP0CX24 172 aaPredicted RBP5.87□□□□□ -1.47
MSP1YGR028W UNG1P12887 359 aa5.87□□□□□ -1.47
MSP1YGR028W VPS51P36116 164 aa5.87□□□□□ -1.47
MSP1YGR028W GLG1P36143 616 aa5.87□□□□□ -1.47
MSP1YGR028W YBR062CP38239 180 aa5.87□□□□□ -1.47
MSP1YGR028W CIN1P40987 1014 aa5.87□□□□□ -1.47
MSP1YGR028W RNR4P49723 345 aaKnown RBP5.87□□□□□ -1.47
MSP1YGR028W TAF6P53040 516 aa5.87□□□□□ -1.47
MSP1YGR028W HOS2P53096 452 aaPredicted RBP5.87□□□□□ -1.47
MSP1YGR028W TPC1P53257 314 aa5.87□□□□□ -1.47
MSP1YGR028W HOL1P53389 586 aa5.87□□□□□ -1.47
MSP1YGR028W ATG4P53867 494 aa5.87□□□□□ -1.47
MSP1YGR028W GMC2Q06201 188 aa5.87□□□□□ -1.47
MSP1YGR028W YPS7Q06325 596 aa5.87□□□□□ -1.47
MSP1YGR028W YDL121CQ07541 149 aa5.87□□□□□ -1.47
MSP1YGR028W YKL033W-AQ86ZR7 236 aa5.87□□□□□ -1.47
MSP1YGR028W CAR1P00812 333 aaKnown RBP5.86□□□□□ -1.47
MSP1YGR028W GRR1P24814 1151 aa5.86□□□□□ -1.47
MSP1YGR028W DHR2P36009 735 aaPredicted RBP5.86□□□□□ -1.47
MSP1YGR028W IFA38P38286 347 aa5.86□□□□□ -1.47
MSP1YGR028W STP2P38704 541 aa5.86□□□□□ -1.47
MSP1YGR028W GRE3P38715 327 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
MSP1YGR028W TRR2P38816 342 aa5.86□□□□□ -1.47
MSP1YGR028W GPI16P38875 610 aa5.86□□□□□ -1.47
MSP1YGR028W PSA1P41940 361 aaKnown RBP5.86□□□□□ -1.47
MSP1YGR028W IRC6P43615 237 aa5.86□□□□□ -1.47
MSP1YGR028W YJL043WP47053 257 aa5.86□□□□□ -1.47
MSP1YGR028W YJR142WP47173 342 aa5.86□□□□□ -1.47
MSP1YGR028W MPA43P53583 542 aaPredicted RBP5.86□□□□□ -1.47
MSP1YGR028W YPL068CQ02749 293 aa5.86□□□□□ -1.47
MSP1YGR028W YHC1Q05900 231 aaKnown RBP5.86□□□□□ -1.47
MSP1YGR028W YPR091CQ06833 770 aa5.86□□□□□ -1.47
MSP1YGR028W YLR036CQ07986 203 aa5.86□□□□□ -1.47
MSP1YGR028W REX3Q12090 404 aa5.86□□□□□ -1.47
MSP1YGR028W YKL018C-AQ3E7A7 99 aa5.86□□□□□ -1.47
MSP1YGR028W RPB5P20434 215 aa5.85□□□□□ -1.47
MSP1YGR028W RVS161P25343 265 aaKnown RBP5.85□□□□□ -1.47
MSP1YGR028W AYR1P40471 297 aa5.85□□□□□ -1.47
MSP1YGR028W LYS12P40495 371 aaKnown RBP5.85□□□□□ -1.47
MSP1YGR028W TDA10P42938 290 aa5.85□□□□□ -1.47
MSP1YGR028W MDV1P47025 714 aa5.85□□□□□ -1.47
MSP1YGR028W GOR1P53839 350 aa5.85□□□□□ -1.47
MSP1YGR028W SKI8Q02793 397 aaPredicted RBP5.85□□□□□ -1.47
MSP1YGR028W SEI1Q06058 285 aa5.85□□□□□ -1.47
MSP1YGR028W YLL007CQ07799 665 aa5.85□□□□□ -1.47
MSP1YGR028W UAF30Q08747 228 aa5.85□□□□□ -1.47
MSP1YGR028W MLH3Q12083 715 aa5.85□□□□□ -1.47
MSP1YGR028W SAS5Q99314 248 aa5.85□□□□□ -1.47
MSP1YGR028W CBS2P14905 389 aa5.84□□□□□ -1.47
MSP1YGR028W CDC43P18898 376 aa5.84□□□□□ -1.47
MSP1YGR028W MCK1P21965 375 aaKnown RBP5.84□□□□□ -1.47
MSP1YGR028W GFD2P25370 566 aaKnown RBP5.84□□□□□ -1.47
MSP1YGR028W EMP70P32802 667 aa5.84□□□□□ -1.47
MSP1YGR028W ARN1P38731 627 aa5.84□□□□□ -1.47
MSP1YGR028W APE4P38821 490 aa5.84□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms