RNA–Protein interactions for RNA: YER144C

UBP5, Transcript of Putative ubiquitin-specific protease, yeast

Gene UBP5, Length 2,418 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP5	YER144C	SFH1	Q06168	426 aa		3.13	□□□□□ -1.91
UBP5	YER144C	COS7	Q07788	383 aa		3.13	□□□□□ -1.91
UBP5	YER144C	GSH2	Q08220	491 aa		3.13	□□□□□ -1.91
UBP5	YER144C	DCI1	Q08558	271 aa		3.13	□□□□□ -1.91
UBP5	YER144C	NDD1	Q08887	554 aa		3.13	□□□□□ -1.91
UBP5	YER144C	LYS21	Q12122	440 aa	Known RBP	3.13	□□□□□ -1.91
UBP5	YER144C	PDE2	P06776	526 aa		3.13	□□□□□ -1.91
UBP5	YER144C	STE3	P06783	470 aa		3.13	□□□□□ -1.91
UBP5	YER144C	KSS1	P14681	368 aa		3.13	□□□□□ -1.91
UBP5	YER144C	SPO7	P18410	259 aa		3.13	□□□□□ -1.91
UBP5	YER144C	FPR1	P20081	114 aa	Known RBP	3.13	□□□□□ -1.91
UBP5	YER144C	KIN3	P22209	435 aa		3.13	□□□□□ -1.91
UBP5	YER144C	ADH7	P25377	361 aa		3.13	□□□□□ -1.91
UBP5	YER144C	LAC1	P28496	418 aa		3.13	□□□□□ -1.91
UBP5	YER144C	NTG1	P31378	399 aa		3.13	□□□□□ -1.91
UBP5	YER144C	NTH1	P32356	751 aa		3.13	□□□□□ -1.91
UBP5	YER144C	SSE1	P32589	693 aa	Known RBP	3.13	□□□□□ -1.91
UBP5	YER144C	BUR6	P40096	142 aa		3.13	□□□□□ -1.91
UBP5	YER144C	VHS2	P40463	436 aa		3.13	□□□□□ -1.91
UBP5	YER144C	STB1	P42845	420 aa		3.13	□□□□□ -1.91
UBP5	YER144C	YGR149W	P48236	432 aa		3.13	□□□□□ -1.91
UBP5	YER144C	RBL2	P48606	106 aa	Known RBP	3.13	□□□□□ -1.91
UBP5	YER144C	YDR179W-A	Q03983	463 aa		3.13	□□□□□ -1.91
UBP5	YER144C	DLT1	Q04216	342 aa		3.13	□□□□□ -1.91
UBP5	YER144C	YDR109C	Q04585	715 aa		3.13	□□□□□ -1.91
UBP5	YER144C	DYN3	Q04949	312 aa		3.13	□□□□□ -1.91
UBP5	YER144C	YML053C	Q04978	212 aa		3.13	□□□□□ -1.91
UBP5	YER144C	NCA2	Q12374	616 aa		3.13	□□□□□ -1.91
UBP5	YER144C	RPS13	P05756	151 aa	Known RBP	3.12	□□□□□ -1.91
UBP5	YER144C	PEP4	P07267	405 aa	Known RBP	3.12	□□□□□ -1.91
UBP5	YER144C	RIP1	P08067	215 aa		3.12	□□□□□ -1.91
UBP5	YER144C	DAL81	P21657	970 aa		3.12	□□□□□ -1.91
UBP5	YER144C	MTR2	P34232	184 aa	Known RBP	3.12	□□□□□ -1.91
UBP5	YER144C	ETR1	P38071	380 aa		3.12	□□□□□ -1.91
UBP5	YER144C	ZTA1	P38230	334 aa	Known RBP	3.12	□□□□□ -1.91
UBP5	YER144C	FZO1	P38297	855 aa		3.12	□□□□□ -1.91
UBP5	YER144C	VBA2	P38358	474 aa	Known RBP	3.12	□□□□□ -1.91
UBP5	YER144C	DED81	P38707	554 aa	Known RBP	3.12	□□□□□ -1.91
UBP5	YER144C	LIN1	P38852	340 aa	Predicted RBP	3.12	□□□□□ -1.91
UBP5	YER144C	FAD1	P38913	306 aa		3.12	□□□□□ -1.91
UBP5	YER144C	SEO1	P39709	593 aa		3.12	□□□□□ -1.91
UBP5	YER144C	TDA10	P42938	290 aa		3.12	□□□□□ -1.91
UBP5	YER144C	BPL1	P48445	690 aa	Predicted RBP	3.12	□□□□□ -1.91
UBP5	YER144C	RCF2	P53721	224 aa		3.12	□□□□□ -1.91
UBP5	YER144C	IMP4	P53941	290 aa	Known RBP	3.12	□□□□□ -1.91
UBP5	YER144C	CDC123	Q05791	360 aa		3.12	□□□□□ -1.91
UBP5	YER144C	CYK3	Q07533	885 aa		3.12	□□□□□ -1.91
UBP5	YER144C	SLD7	Q08457	257 aa		3.12	□□□□□ -1.91
UBP5	YER144C	GEP3	Q08622	556 aa		3.12	□□□□□ -1.91
UBP5	YER144C	YLR046C	Q12253	270 aa		3.12	□□□□□ -1.91
UBP5	YER144C	PEX11	Q12462	236 aa		3.12	□□□□□ -1.91
UBP5	YER144C	SRN2	Q99176	213 aa		3.12	□□□□□ -1.91
UBP5	YER144C	RPL31B	P0C2H9	113 aa	Known RBP	3.12	□□□□□ -1.91
UBP5	YER144C	SCH9	P11792	824 aa	Known RBP	3.12	□□□□□ -1.91
UBP5	YER144C	PRP2	P20095	876 aa	Predicted RBP	3.12	□□□□□ -1.91
UBP5	YER144C	MAK32	P23060	363 aa		3.12	□□□□□ -1.91
UBP5	YER144C	VMA16	P23968	213 aa		3.12	□□□□□ -1.91
UBP5	YER144C	YCL068C	P25593	260 aa		3.12	□□□□□ -1.91
UBP5	YER144C	IMG1	P25626	169 aa		3.12	□□□□□ -1.91
UBP5	YER144C	SRL3	P36167	246 aa		3.12	□□□□□ -1.91
UBP5	YER144C	MRPL4	P36517	319 aa		3.12	□□□□□ -1.91
UBP5	YER144C	MRP21	P38175	177 aa		3.12	□□□□□ -1.91
UBP5	YER144C	YHR210C	P38893	341 aa		3.12	□□□□□ -1.91
UBP5	YER144C	RCY1	P39531	840 aa		3.12	□□□□□ -1.91
UBP5	YER144C	AIM23	P47015	356 aa		3.12	□□□□□ -1.91
UBP5	YER144C	PYK2	P52489	506 aa	Known RBP	3.12	□□□□□ -1.91
UBP5	YER144C	PRM1	P53835	661 aa		3.12	□□□□□ -1.91
UBP5	YER144C	SKO1	Q02100	647 aa		3.12	□□□□□ -1.91
UBP5	YER144C	NUP100	Q02629	959 aa		3.12	□□□□□ -1.91
UBP5	YER144C	RPN9	Q04062	393 aa	Known RBP	3.12	□□□□□ -1.91
UBP5	YER144C	FAR8	Q05040	523 aa		3.12	□□□□□ -1.91
UBP5	YER144C	RRT8	Q08219	342 aa		3.12	□□□□□ -1.91
UBP5	YER144C	LDB17	Q12342	491 aa		3.12	□□□□□ -1.91
UBP5	YER144C	YOR338W	Q99326	363 aa		3.12	□□□□□ -1.91
UBP5	YER144C	YPT1	P01123	206 aa	Known RBP	3.11	□□□□□ -1.91
UBP5	YER144C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
UBP5	YER144C	SRV2	P17555	526 aa	Known RBP	3.11	□□□□□ -1.91
UBP5	YER144C	HRR25	P29295	494 aa	Known RBP	3.11	□□□□□ -1.91
UBP5	YER144C	AEP1	P32493	518 aa		3.11	□□□□□ -1.91
UBP5	YER144C	ATO2	P32907	282 aa		3.11	□□□□□ -1.91
UBP5	YER144C	MRPL17	P36528	281 aa		3.11	□□□□□ -1.91
UBP5	YER144C	RPH1	P39956	796 aa		3.11	□□□□□ -1.91
UBP5	YER144C	ERG10	P41338	398 aa	Known RBP	3.11	□□□□□ -1.91
UBP5	YER144C	GCN20	P43535	752 aa	Known RBP	3.11	□□□□□ -1.91
UBP5	YER144C	ATG27	P46989	271 aa		3.11	□□□□□ -1.91
UBP5	YER144C	ASN2	P49090	572 aa	Known RBP	3.11	□□□□□ -1.91
UBP5	YER144C	YGL108C	P53139	140 aa		3.11	□□□□□ -1.91
UBP5	YER144C	OCA2	P53949	197 aa		3.11	□□□□□ -1.91
UBP5	YER144C	SPP2	Q02521	185 aa		3.11	□□□□□ -1.91
UBP5	YER144C	PET117	Q02771	107 aa		3.11	□□□□□ -1.91
UBP5	YER144C	PIR1	Q03178	341 aa		3.11	□□□□□ -1.91
UBP5	YER144C	YPR114W	Q06107	315 aa		3.11	□□□□□ -1.91
UBP5	YER144C	TMA10	Q06177	86 aa		3.11	□□□□□ -1.91
UBP5	YER144C	YET3	Q07451	203 aa		3.11	□□□□□ -1.91
UBP5	YER144C	NSE1	Q07913	336 aa		3.11	□□□□□ -1.91
UBP5	YER144C	YLR040C	Q07988	224 aa		3.11	□□□□□ -1.91
UBP5	YER144C	NTO1	Q12311	748 aa		3.11	□□□□□ -1.91
UBP5	YER144C	YOR012W	Q12351	137 aa		3.11	□□□□□ -1.91
UBP5	YER144C	TAO3	P40468	2376 aa		3.11	□□□□□ -1.91
UBP5	YER144C	GCD2	P12754	651 aa	Predicted RBP	3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 83.4 ms