RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W YPR117WQ06116 2489 aa5.81□□□□□ -1.48
LCP5YER127W SKN1P33336 771 aa5.81□□□□□ -1.48
LCP5YER127W YBL059WP34224 193 aa5.81□□□□□ -1.48
LCP5YER127W MNL1P38888 796 aa5.81□□□□□ -1.48
LCP5YER127W MMF1P40185 145 aaKnown RBP5.81□□□□□ -1.48
LCP5YER127W PRM5P40476 318 aa5.81□□□□□ -1.48
LCP5YER127W YIP5P53108 310 aa5.81□□□□□ -1.48
LCP5YER127W LSB1P53281 241 aa5.81□□□□□ -1.48
LCP5YER127W YDR541CQ03049 344 aa5.81□□□□□ -1.48
LCP5YER127W CCE1Q03702 353 aa5.81□□□□□ -1.48
LCP5YER127W NDL1Q06568 189 aa5.81□□□□□ -1.48
LCP5YER127W TPT1Q12272 230 aaKnown RBP5.81□□□□□ -1.48
LCP5YER127W RPL6BP05739 176 aaKnown RBP5.8□□□□□ -1.48
LCP5YER127W YSC83P32792 385 aa5.8□□□□□ -1.48
LCP5YER127W MLH1P38920 769 aa5.8□□□□□ -1.48
LCP5YER127W VPS45P38932 577 aa5.8□□□□□ -1.48
LCP5YER127W CHS6P40955 746 aa5.8□□□□□ -1.48
LCP5YER127W RPL6AQ02326 176 aaKnown RBP5.8□□□□□ -1.48
LCP5YER127W YOR387CQ08910 206 aa5.8□□□□□ -1.48
LCP5YER127W AHC1Q12433 566 aa5.8□□□□□ -1.48
LCP5YER127W VPS13Q07878 3144 aa5.79□□□□□ -1.48
LCP5YER127W HHF1P02309 103 aaKnown RBP5.79□□□□□ -1.48
LCP5YER127W TPM1P17536 199 aaKnown RBP5.79□□□□□ -1.48
LCP5YER127W YCL068CP25593 260 aa5.79□□□□□ -1.48
LCP5YER127W YKL097CP34245 136 aa5.79□□□□□ -1.48
LCP5YER127W RRP1P35178 278 aaPredicted RBP5.79□□□□□ -1.48
LCP5YER127W CHK1P38147 527 aa5.79□□□□□ -1.48
LCP5YER127W KAP104P38217 918 aaKnown RBP5.79□□□□□ -1.48
LCP5YER127W YRM1Q12340 786 aa5.79□□□□□ -1.48
LCP5YER127W NCA2Q12374 616 aa5.79□□□□□ -1.48
LCP5YER127W OPI3P05375 206 aa5.78□□□□□ -1.48
LCP5YER127W SNA3P14359 133 aa5.78□□□□□ -1.48
LCP5YER127W CBS2P14905 389 aa5.78□□□□□ -1.48
LCP5YER127W SLM5P25345 492 aaKnown RBP5.78□□□□□ -1.48
LCP5YER127W PAD1P33751 242 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
LCP5YER127W PTH1P38876 190 aaKnown RBP5.78□□□□□ -1.48
LCP5YER127W TOS3P43637 560 aa5.78□□□□□ -1.48
LCP5YER127W YPL107WQ02873 248 aa5.78□□□□□ -1.48
LCP5YER127W ELP3Q02908 557 aaKnown RBP5.78□□□□□ -1.48
LCP5YER127W ECM7Q06200 448 aa5.78□□□□□ -1.48
LCP5YER127W TRP1P00912 224 aa5.77□□□□□ -1.49
LCP5YER127W ATP1P07251 545 aaKnown RBP5.77□□□□□ -1.49
LCP5YER127W SPT15P13393 240 aaKnown RBP5.77□□□□□ -1.49
LCP5YER127W COQ1P18900 473 aa5.77□□□□□ -1.49
LCP5YER127W COX13P32799 129 aa5.77□□□□□ -1.49
LCP5YER127W MRPL4P36517 319 aa5.77□□□□□ -1.49
LCP5YER127W YBR139WP38109 508 aa5.77□□□□□ -1.49
LCP5YER127W PHO88P38264 188 aaPredicted RBP5.77□□□□□ -1.49
LCP5YER127W JLP2P40206 208 aa5.77□□□□□ -1.49
LCP5YER127W PAC11P40960 533 aa5.77□□□□□ -1.49
LCP5YER127W ASN2P49090 572 aaKnown RBP5.77□□□□□ -1.49
LCP5YER127W SPH1Q06160 661 aa5.77□□□□□ -1.49
LCP5YER127W SKS1Q12505 502 aa5.77□□□□□ -1.49
LCP5YER127W POX1P13711 748 aa5.76□□□□□ -1.49
LCP5YER127W MCR1P36060 302 aaKnown RBP5.76□□□□□ -1.49
LCP5YER127W SIM1P40472 476 aa5.76□□□□□ -1.49
LCP5YER127W HER2Q03557 464 aa5.76□□□□□ -1.49
LCP5YER127W NFI1Q12216 726 aa5.76□□□□□ -1.49
LCP5YER127W ERV2Q12284 196 aa5.76□□□□□ -1.49
LCP5YER127W RNH203Q12338 110 aa5.76□□□□□ -1.49
LCP5YER127W NAM9P27929 486 aa5.75□□□□□ -1.49
LCP5YER127W MNS1P32906 549 aa5.75□□□□□ -1.49
LCP5YER127W SKI2P35207 1287 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
LCP5YER127W LAS1P36146 502 aaPredicted RBP5.75□□□□□ -1.49
LCP5YER127W DAD2P36162 133 aa5.75□□□□□ -1.49
LCP5YER127W YSW1P38280 609 aa5.75□□□□□ -1.49
LCP5YER127W ALD5P40047 520 aaKnown RBP5.75□□□□□ -1.49
LCP5YER127W MTM1P53320 366 aa5.75□□□□□ -1.49
LCP5YER127W SPR6Q01684 191 aa5.75□□□□□ -1.49
LCP5YER127W NDE2Q07500 545 aa5.75□□□□□ -1.49
LCP5YER127W RAX1Q08760 435 aa5.75□□□□□ -1.49
LCP5YER127W EXG1P23776 448 aaKnown RBP5.74□□□□□ -1.49
LCP5YER127W MSP1P28737 362 aa5.74□□□□□ -1.49
LCP5YER127W ATM1P40416 690 aa5.74□□□□□ -1.49
LCP5YER127W LIF1P53150 421 aa5.74□□□□□ -1.49
LCP5YER127W CWC25P53854 179 aaKnown RBP5.74□□□□□ -1.49
LCP5YER127W IPK1Q06667 281 aa5.74□□□□□ -1.49
LCP5YER127W SMF3Q12078 473 aaPredicted RBP5.74□□□□□ -1.49
LCP5YER127W ERP3Q12403 225 aa5.74□□□□□ -1.49
LCP5YER127W CEX1Q12453 761 aa5.74□□□□□ -1.49
LCP5YER127W YDR524C-BQ3E6R4 66 aa5.74□□□□□ -1.49
LCP5YER127W CYC3P06182 269 aa5.73□□□□□ -1.49
LCP5YER127W ANP1P32629 500 aa5.73□□□□□ -1.49
LCP5YER127W MYO3P36006 1272 aa5.73□□□□□ -1.49
LCP5YER127W DOA1P36037 715 aa5.73□□□□□ -1.49
LCP5YER127W AVT5P38176 459 aa5.73□□□□□ -1.49
LCP5YER127W RFS1P38234 210 aaKnown RBP5.73□□□□□ -1.49
LCP5YER127W SPP381P38282 291 aaPredicted RBP5.73□□□□□ -1.49
LCP5YER127W GDT1P38301 280 aaPredicted RBP5.73□□□□□ -1.49
LCP5YER127W NUP116Q02630 1113 aa5.73□□□□□ -1.49
LCP5YER127W RPL12AP0CX53 165 aaKnown RBP5.72□□□□□ -1.49
LCP5YER127W RPL12BP0CX54 165 aa5.72□□□□□ -1.49
LCP5YER127W CAP2P13517 287 aa5.72□□□□□ -1.49
LCP5YER127W HMF1P40037 129 aaKnown RBP5.72□□□□□ -1.49
LCP5YER127W STE24P47154 453 aa5.72□□□□□ -1.49
LCP5YER127W PMT5P52867 743 aa5.72□□□□□ -1.49
LCP5YER127W RTT102P53330 157 aa5.72□□□□□ -1.49
LCP5YER127W URC2Q04411 772 aa5.72□□□□□ -1.49
LCP5YER127W YFH1Q07540 174 aa5.72□□□□□ -1.49
LCP5YER127W TFB5Q3E7C1 72 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 88.1 ms