RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C VPS51P36116 164 aa6.05□□□□□ -1.44
SHO1YER118C SUL1P38359 859 aa6.05□□□□□ -1.44
SHO1YER118C RTC3P38804 111 aaPredicted RBP6.05□□□□□ -1.44
SHO1YER118C ARG2P40360 574 aa6.05□□□□□ -1.44
SHO1YER118C TDA10P42938 290 aa6.05□□□□□ -1.44
SHO1YER118C NAS6P50086 228 aa6.05□□□□□ -1.44
SHO1YER118C PKP2P53170 491 aa6.05□□□□□ -1.44
SHO1YER118C YGR067CP53243 804 aa6.05□□□□□ -1.44
SHO1YER118C ALG11P53954 548 aaKnown RBP6.05□□□□□ -1.44
SHO1YER118C GPI15P53961 229 aa6.05□□□□□ -1.44
SHO1YER118C GGA1Q06336 557 aa6.05□□□□□ -1.44
SHO1YER118C DAP1Q12091 152 aa6.05□□□□□ -1.44
SHO1YER118C HIS4P00815 799 aaKnown RBP6.04□□□□□ -1.44
SHO1YER118C PPR1P07272 904 aaPredicted RBP6.04□□□□□ -1.44
SHO1YER118C YAK1P14680 807 aa6.04□□□□□ -1.44
SHO1YER118C CBF1P17106 351 aa6.04□□□□□ -1.44
SHO1YER118C PMA2P19657 947 aa6.04□□□□□ -1.44
SHO1YER118C RPO26P20435 155 aa6.04□□□□□ -1.44
SHO1YER118C ERG9P29704 444 aa6.04□□□□□ -1.44
SHO1YER118C VAM7P32912 316 aa6.04□□□□□ -1.44
SHO1YER118C SEC72P39742 193 aaKnown RBP6.04□□□□□ -1.44
SHO1YER118C SHO1P40073 367 aa6.04□□□□□ -1.44
SHO1YER118C AGP3P43548 558 aa6.04□□□□□ -1.44
SHO1YER118C AIM24P47127 394 aa6.04□□□□□ -1.44
SHO1YER118C TOS2P50078 622 aa6.04□□□□□ -1.44
SHO1YER118C CPR8P53728 308 aa6.04□□□□□ -1.44
SHO1YER118C SAM50P53969 484 aa6.04□□□□□ -1.44
SHO1YER118C ASI1P54074 624 aa6.04□□□□□ -1.44
SHO1YER118C CDC123Q05791 360 aa6.04□□□□□ -1.44
SHO1YER118C DCR2Q05924 578 aa6.04□□□□□ -1.44
SHO1YER118C BRX1Q08235 291 aaKnown RBP6.04□□□□□ -1.44
SHO1YER118C MED7Q08278 222 aa6.04□□□□□ -1.44
SHO1YER118C GAL4P04386 881 aa6.03□□□□□ -1.44
SHO1YER118C MRP1P10662 321 aaKnown RBP6.03□□□□□ -1.44
SHO1YER118C UTR1P21373 530 aa6.03□□□□□ -1.44
SHO1YER118C YCR006CP25350 157 aa6.03□□□□□ -1.44
SHO1YER118C MNS1P32906 549 aa6.03□□□□□ -1.44
SHO1YER118C MIC12P38341 106 aa6.03□□□□□ -1.44
SHO1YER118C LAG1P38703 411 aa6.03□□□□□ -1.44
SHO1YER118C YIL001WP40560 513 aa6.03□□□□□ -1.44
SHO1YER118C SEH1P53011 349 aaKnown RBP6.03□□□□□ -1.44
SHO1YER118C YGL117WP53133 265 aa6.03□□□□□ -1.44
SHO1YER118C MKC7P53379 596 aa6.03□□□□□ -1.44
SHO1YER118C YNL181WP53878 407 aa6.03□□□□□ -1.44
SHO1YER118C AI5_BETAQ9ZZX0 354 aa6.03□□□□□ -1.44
SHO1YER118C RPL35AP0CX84 120 aaKnown RBP6.02□□□□□ -1.45
SHO1YER118C RPL35BP0CX85 120 aaKnown RBP6.02□□□□□ -1.45
SHO1YER118C HPR1P17629 752 aaKnown RBP6.02□□□□□ -1.45
SHO1YER118C ERG4P25340 473 aa6.02□□□□□ -1.45
SHO1YER118C PPZ1P26570 692 aa6.02□□□□□ -1.45
SHO1YER118C TOA2P32774 122 aa6.02□□□□□ -1.45
SHO1YER118C LIP5P32875 414 aa6.02□□□□□ -1.45
SHO1YER118C MIT1P40002 666 aa6.02□□□□□ -1.45
SHO1YER118C ERG28P40030 148 aa6.02□□□□□ -1.45
SHO1YER118C PCL6P40038 420 aa6.02□□□□□ -1.45
SHO1YER118C FAU1P40099 211 aa6.02□□□□□ -1.45
SHO1YER118C NDC80P40460 691 aa6.02□□□□□ -1.45
SHO1YER118C SLM1P40485 686 aa6.02□□□□□ -1.45
SHO1YER118C YIL060WP40519 144 aa6.02□□□□□ -1.45
SHO1YER118C ERG10P41338 398 aaKnown RBP6.02□□□□□ -1.45
SHO1YER118C RPC17P47076 161 aa6.02□□□□□ -1.45
SHO1YER118C YPT11P48559 417 aa6.02□□□□□ -1.45
SHO1YER118C OKP1P53298 406 aa6.02□□□□□ -1.45
SHO1YER118C SLI1P53304 468 aa6.02□□□□□ -1.45
SHO1YER118C EAF7P53911 425 aaKnown RBP6.02□□□□□ -1.45
SHO1YER118C TMA10Q06177 86 aa6.02□□□□□ -1.45
SHO1YER118C THI72Q08579 599 aa6.02□□□□□ -1.45
SHO1YER118C YPQ1Q12010 308 aa6.02□□□□□ -1.45
SHO1YER118C YLR108CQ12259 485 aa6.02□□□□□ -1.45
SHO1YER118C YOR338WQ99326 363 aa6.02□□□□□ -1.45
SHO1YER118C RPL7AP05737 244 aaKnown RBP6.01□□□□□ -1.45
SHO1YER118C RAD1P06777 1100 aa6.01□□□□□ -1.45
SHO1YER118C REV1P12689 985 aa6.01□□□□□ -1.45
SHO1YER118C KIN3P22209 435 aa6.01□□□□□ -1.45
SHO1YER118C UBC6P33296 250 aaPredicted RBP6.01□□□□□ -1.45
SHO1YER118C ERV46P39727 415 aa6.01□□□□□ -1.45
SHO1YER118C ISC1P40015 477 aaKnown RBP6.01□□□□□ -1.45
SHO1YER118C YGR210CP42942 411 aa6.01□□□□□ -1.45
SHO1YER118C YGR035CP53222 116 aa6.01□□□□□ -1.45
SHO1YER118C PXR1P53335 271 aaPredicted RBP6.01□□□□□ -1.45
SHO1YER118C SMX3P54999 86 aaPredicted RBP6.01□□□□□ -1.45
SHO1YER118C YPL034WQ03083 165 aa6.01□□□□□ -1.45
SHO1YER118C OST6Q03723 332 aa6.01□□□□□ -1.45
SHO1YER118C YMR034CQ05131 434 aaPredicted RBP6.01□□□□□ -1.45
SHO1YER118C CDD1Q06549 142 aa6.01□□□□□ -1.45
SHO1YER118C PBP4Q07362 185 aaKnown RBP6.01□□□□□ -1.45
SHO1YER118C REX4Q08237 289 aa6.01□□□□□ -1.45
SHO1YER118C ABP140Q08641 628 aaKnown RBP6.01□□□□□ -1.45
SHO1YER118C RPL7BQ12213 244 aaKnown RBP6.01□□□□□ -1.45
SHO1YER118C ERP3Q12403 225 aa6.01□□□□□ -1.45
SHO1YER118C HEM2P05373 342 aa6□□□□□ -1.45
SHO1YER118C TPK3P05986 398 aa6□□□□□ -1.45
SHO1YER118C ALG7P07286 448 aa6□□□□□ -1.45
SHO1YER118C ACB1P31787 87 aa6□□□□□ -1.45
SHO1YER118C YKL097CP34245 136 aa6□□□□□ -1.45
SHO1YER118C SWD2P36104 329 aaPredicted RBP6□□□□□ -1.45
SHO1YER118C YMC2P38087 329 aa6□□□□□ -1.45
SHO1YER118C HMS2P47175 358 aa6□□□□□ -1.45
SHO1YER118C CWC23P52868 283 aaPredicted RBP6□□□□□ -1.45
SHO1YER118C PCP1P53259 346 aa6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms