RNA–Protein interactions for RNA: YEL024W

RIP1, Transcript of Ubiquinol-cytochrome-c reductase, yeast

Gene RIP1, Length 648 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIP1	YEL024W	APC2	Q12440	853 aa		4.27	□□□□□ -1.73
RIP1	YEL024W	SKM1	Q12469	655 aa		4.27	□□□□□ -1.73
RIP1	YEL024W	HTZ1	Q12692	134 aa	Known RBP	4.27	□□□□□ -1.73
RIP1	YEL024W	RPS17A	P02407	136 aa	Known RBP	4.26	□□□□□ -1.73
RIP1	YEL024W	YOL163W	P0CF20	169 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	DAT1	P13483	248 aa	Known RBP	4.26	□□□□□ -1.73
RIP1	YEL024W	RPS17B	P14127	136 aa	Known RBP	4.26	□□□□□ -1.73
RIP1	YEL024W	TRX3	P25372	127 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	PEX34	P25584	144 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	SBA1	P28707	216 aa	Known RBP	4.26	□□□□□ -1.73
RIP1	YEL024W	HOM6	P31116	359 aa	Known RBP	4.26	□□□□□ -1.73
RIP1	YEL024W	PPQ1	P32945	549 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	PDR3	P33200	976 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
RIP1	YEL024W	MRPL3	P36516	390 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	SOL2	P37262	315 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	AHP1	P38013	176 aa	Known RBP	4.26	□□□□□ -1.73
RIP1	YEL024W	CCZ1	P38273	704 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	RPS20	P38701	121 aa	Known RBP	4.26	□□□□□ -1.73
RIP1	YEL024W	VMA7	P39111	118 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	LYS12	P40495	371 aa	Known RBP	4.26	□□□□□ -1.73
RIP1	YEL024W	YKE4	P40544	346 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	MNT3	P40549	630 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	YJL218W	P40892	196 aa	Known RBP	4.26	□□□□□ -1.73
RIP1	YEL024W	ERG10	P41338	398 aa	Known RBP	4.26	□□□□□ -1.73
RIP1	YEL024W	PFA3	P42836	336 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	MDE1	P47095	244 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	ECM27	P47144	725 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	NUP57	P48837	541 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	BIO3	P50277	480 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	SPT20	P50875	604 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	MPC1	P53157	130 aa	Known RBP	4.26	□□□□□ -1.73
RIP1	YEL024W	RBG2	P53295	368 aa	Known RBP	4.26	□□□□□ -1.73
RIP1	YEL024W	YNR065C	P53751	1116 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	LSM7	P53905	115 aa	Known RBP	4.26	□□□□□ -1.73
RIP1	YEL024W	NAM8	Q00539	523 aa	Known RBP	4.26	□□□□□ -1.73
RIP1	YEL024W	SPC19	Q03954	165 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	YMR130W	Q04223	302 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	RQC1	Q05468	723 aa	Known RBP	4.26	□□□□□ -1.73
RIP1	YEL024W	YLR283W	Q05867	314 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	YEH1	Q07804	573 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	XYL2	Q07993	356 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	RAX1	Q08760	435 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	FEX1	Q08913	375 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	PER33	Q12144	273 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	YOR214C	Q12282	236 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	ATG31	Q12421	196 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	RRP12	Q12754	1228 aa	Known RBP	4.26	□□□□□ -1.73
RIP1	YEL024W	MTR10	Q99189	972 aa		4.26	□□□□□ -1.73
RIP1	YEL024W	CYC1	P00044	109 aa	Predicted RBP	4.25	□□□□□ -1.73
RIP1	YEL024W	GCN4	P03069	281 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	PEP4	P07267	405 aa	Known RBP	4.25	□□□□□ -1.73
RIP1	YEL024W	MSF1	P08425	469 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	SPS2	P08459	502 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	RPS21A	P0C0V8	87 aa	Known RBP	4.25	□□□□□ -1.73
RIP1	YEL024W	PET54	P10834	293 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	REV1	P12689	985 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	SNF6	P18888	332 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	APN1	P22936	367 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	FPS1	P23900	669 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	RFA2	P26754	273 aa	Known RBP	4.25	□□□□□ -1.73
RIP1	YEL024W	ITR1	P30605	584 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	NDC1	P32500	655 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	ZRT3	P34240	503 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	YKL151C	P36059	337 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	IRS4	P36115	615 aa	Known RBP	4.25	□□□□□ -1.73
RIP1	YEL024W	ASC1	P38011	319 aa	Known RBP	4.25	□□□□□ -1.73
RIP1	YEL024W	ECM29	P38737	1868 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	YEL073C	P39974	107 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	PHM8	P40025	321 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	LAS21	P40367	830 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	FMC1	P40491	155 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	YIR016W	P40572	265 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	PFS2	P42841	465 aa	Known RBP	4.25	□□□□□ -1.73
RIP1	YEL024W	LSM1	P47017	172 aa	Known RBP	4.25	□□□□□ -1.73
RIP1	YEL024W	COS12	P53053	380 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	YGL101W	P53144	215 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	MRH4	P53166	561 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	COS1	P53822	381 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	HXT11	P54862	567 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	DID2	P69771	204 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	TIM11	P81449	96 aa	Predicted RBP	4.25	□□□□□ -1.73
RIP1	YEL024W	PLM2	Q04383	521 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	YMR315W	Q04869	349 aa	Known RBP	4.25	□□□□□ -1.73
RIP1	YEL024W	RRP45	Q05636	305 aa	Known RBP	4.25	□□□□□ -1.73
RIP1	YEL024W	IPK1	Q06667	281 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	PUS9	Q12069	462 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	WTM2	Q12206	467 aa		4.25	□□□□□ -1.73
RIP1	YEL024W	YEL009C-A	A0A023PZF2	135 aa		4.24	□□□□□ -1.73
RIP1	YEL024W	SIR2	P06700	562 aa		4.24	□□□□□ -1.73
RIP1	YEL024W	KIN3	P22209	435 aa		4.24	□□□□□ -1.73
RIP1	YEL024W	PRE7	P23724	241 aa	Known RBP	4.24	□□□□□ -1.73
RIP1	YEL024W	DBP2	P24783	546 aa	Known RBP	4.24	□□□□□ -1.73
RIP1	YEL024W	ERG9	P29704	444 aa		4.24	□□□□□ -1.73
RIP1	YEL024W	VMA8	P32610	256 aa	Known RBP	4.24	□□□□□ -1.73
RIP1	YEL024W	LHP1	P33399	275 aa	Known RBP	4.24	□□□□□ -1.73
RIP1	YEL024W	OAR1	P35731	278 aa		4.24	□□□□□ -1.73
RIP1	YEL024W	KKQ8	P36004	724 aa		4.24	□□□□□ -1.73
RIP1	YEL024W	JEN1	P36035	616 aa		4.24	□□□□□ -1.73
RIP1	YEL024W	SNU114	P36048	1008 aa	Known RBP	4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms