RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W HDA2Q06629 674 aa3.99□□□□□ -1.77
TRS85YDR108W KEL3Q08979 651 aaPredicted RBP3.99□□□□□ -1.77
TRS85YDR108W YLL058WQ12198 575 aa3.99□□□□□ -1.77
TRS85YDR108W RKM5Q12367 367 aa3.99□□□□□ -1.77
TRS85YDR108W EFG1Q3E705 233 aaKnown RBP3.99□□□□□ -1.77
TRS85YDR108W HSH49Q99181 213 aaPredicted RBP3.99□□□□□ -1.77
TRS85YDR108W Q0144Q9ZZW2 109 aa3.99□□□□□ -1.77
TRS85YDR108W FLP1P03870 423 aa3.98□□□□□ -1.77
TRS85YDR108W DST1P07273 309 aa3.98□□□□□ -1.77
TRS85YDR108W EST1P17214 699 aaPredicted RBP3.98□□□□□ -1.77
TRS85YDR108W PHO80P20052 293 aa3.98□□□□□ -1.77
TRS85YDR108W RPI1P23250 407 aaKnown RBP3.98□□□□□ -1.77
TRS85YDR108W IMG1P25626 169 aa3.98□□□□□ -1.77
TRS85YDR108W HMX1P32339 317 aa3.98□□□□□ -1.77
TRS85YDR108W SSH4P32343 579 aa3.98□□□□□ -1.77
TRS85YDR108W NRP1P32770 719 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
TRS85YDR108W PHO11P35842 467 aa3.98□□□□□ -1.77
TRS85YDR108W TUL1P36096 758 aa3.98□□□□□ -1.77
TRS85YDR108W PHO89P38361 574 aa3.98□□□□□ -1.77
TRS85YDR108W PHO12P38693 467 aa3.98□□□□□ -1.77
TRS85YDR108W PEX28P38848 579 aa3.98□□□□□ -1.77
TRS85YDR108W MNL1P38888 796 aa3.98□□□□□ -1.77
TRS85YDR108W PAN6P40459 309 aa3.98□□□□□ -1.77
TRS85YDR108W YIL024CP40543 189 aa3.98□□□□□ -1.77
TRS85YDR108W BNA1P47096 177 aa3.98□□□□□ -1.77
TRS85YDR108W YJR111CP47148 283 aaKnown RBP3.98□□□□□ -1.77
TRS85YDR108W FAA4P47912 694 aaKnown RBP3.98□□□□□ -1.77
TRS85YDR108W PKP2P53170 491 aa3.98□□□□□ -1.77
TRS85YDR108W CUS2P53830 285 aaPredicted RBP3.98□□□□□ -1.77
TRS85YDR108W KTR6P54070 446 aa3.98□□□□□ -1.77
TRS85YDR108W ASR1Q06834 288 aa3.98□□□□□ -1.77
TRS85YDR108W SDO1Q07953 250 aaKnown RBP3.98□□□□□ -1.77
TRS85YDR108W YGK3Q12222 375 aaPredicted RBP3.98□□□□□ -1.77
TRS85YDR108W VAM3Q12241 283 aa3.98□□□□□ -1.77
TRS85YDR108W YLR046CQ12253 270 aa3.98□□□□□ -1.77
TRS85YDR108W YOP1Q12402 180 aa3.98□□□□□ -1.77
TRS85YDR108W LPX1Q12405 387 aaKnown RBP3.98□□□□□ -1.77
TRS85YDR108W MHF1Q3E835 90 aa3.98□□□□□ -1.77
TRS85YDR108W SEC7P11075 2009 aaKnown RBP3.98□□□□□ -1.77
TRS85YDR108W PRC1P00729 532 aa3.98□□□□□ -1.77
TRS85YDR108W YER152CP10356 443 aa3.98□□□□□ -1.77
TRS85YDR108W FUN14P18411 198 aa3.98□□□□□ -1.77
TRS85YDR108W PRE1P22141 198 aaKnown RBP3.98□□□□□ -1.77
TRS85YDR108W PRE7P23724 241 aaKnown RBP3.98□□□□□ -1.77
TRS85YDR108W URA7P28274 579 aaKnown RBP3.98□□□□□ -1.77
TRS85YDR108W IDH1P28834 360 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
TRS85YDR108W ACB1P31787 87 aa3.98□□□□□ -1.77
TRS85YDR108W PIN4P34217 668 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
TRS85YDR108W RMA1P36001 430 aaKnown RBP3.98□□□□□ -1.77
TRS85YDR108W SRO77P38163 1010 aa3.98□□□□□ -1.77
TRS85YDR108W BIT2P38346 545 aa3.98□□□□□ -1.77
TRS85YDR108W EFM1P38732 585 aa3.98□□□□□ -1.77
TRS85YDR108W RBG1P39729 369 aa3.98□□□□□ -1.77
TRS85YDR108W RPL10P41805 221 aaKnown RBP3.98□□□□□ -1.77
TRS85YDR108W MCM22P47167 239 aa3.98□□□□□ -1.77
TRS85YDR108W AAD10P47182 288 aa3.98□□□□□ -1.77
TRS85YDR108W ASK10P48361 1146 aa3.98□□□□□ -1.77
TRS85YDR108W MNN10P50108 393 aaKnown RBP3.98□□□□□ -1.77
TRS85YDR108W SHY1P53266 389 aa3.98□□□□□ -1.77
TRS85YDR108W TNA1P53322 534 aa3.98□□□□□ -1.77
TRS85YDR108W YNL034WP53963 612 aa3.98□□□□□ -1.77
TRS85YDR108W YNL018CP53976 612 aa3.98□□□□□ -1.77
TRS85YDR108W VPS9P54787 451 aa3.98□□□□□ -1.77
TRS85YDR108W REG1Q00816 1014 aa3.98□□□□□ -1.77
TRS85YDR108W KIN4Q01919 800 aa3.98□□□□□ -1.77
TRS85YDR108W TRS31Q03337 283 aa3.98□□□□□ -1.77
TRS85YDR108W LRS4Q04087 347 aaKnown RBP3.98□□□□□ -1.77
TRS85YDR108W YLR455WQ06188 304 aa3.98□□□□□ -1.77
TRS85YDR108W SSK1Q07084 712 aa3.98□□□□□ -1.77
TRS85YDR108W LCB4Q12246 624 aa3.98□□□□□ -1.77
TRS85YDR108W YLR126CQ12288 251 aa3.98□□□□□ -1.77
TRS85YDR108W SST2P11972 698 aaKnown RBP3.97□□□□□ -1.77
TRS85YDR108W CKS1P20486 150 aaKnown RBP3.97□□□□□ -1.77
TRS85YDR108W RNR1P21524 888 aaKnown RBP3.97□□□□□ -1.77
TRS85YDR108W IDP1P21954 428 aaKnown RBP3.97□□□□□ -1.77
TRS85YDR108W EMC1P25574 760 aa3.97□□□□□ -1.77
TRS85YDR108W BUB3P26449 341 aa3.97□□□□□ -1.77
TRS85YDR108W YKL162CP36052 402 aa3.97□□□□□ -1.77
TRS85YDR108W FLO10P36170 1169 aa3.97□□□□□ -1.77
TRS85YDR108W MRPL4P36517 319 aa3.97□□□□□ -1.77
TRS85YDR108W VPS45P38932 577 aa3.97□□□□□ -1.77
TRS85YDR108W DHH1P39517 506 aaKnown RBP3.97□□□□□ -1.77
TRS85YDR108W AFG3P39925 761 aa3.97□□□□□ -1.77
TRS85YDR108W TMA108P40462 946 aa3.97□□□□□ -1.77
TRS85YDR108W YIL108WP40483 696 aaKnown RBP3.97□□□□□ -1.77
TRS85YDR108W GLC8P41818 229 aa3.97□□□□□ -1.77
TRS85YDR108W ERR3P42222 437 aa3.97□□□□□ -1.77
TRS85YDR108W YFL040WP43562 540 aa3.97□□□□□ -1.77
TRS85YDR108W YJL045WP47052 634 aa3.97□□□□□ -1.77
TRS85YDR108W YAE1P47118 141 aaPredicted RBP3.97□□□□□ -1.77
TRS85YDR108W YJR154WP47181 346 aa3.97□□□□□ -1.77
TRS85YDR108W NCS6P53088 359 aa3.97□□□□□ -1.77
TRS85YDR108W YGL138CP53122 345 aa3.97□□□□□ -1.77
TRS85YDR108W LSM7P53905 115 aaKnown RBP3.97□□□□□ -1.77
TRS85YDR108W YMR209CQ03648 457 aa3.97□□□□□ -1.77
TRS85YDR108W PEX12Q04370 399 aa3.97□□□□□ -1.77
TRS85YDR108W YPR127WQ06494 345 aa3.97□□□□□ -1.77
TRS85YDR108W ENT4Q07872 247 aa3.97□□□□□ -1.77
TRS85YDR108W LDB18Q07887 179 aa3.97□□□□□ -1.77
TRS85YDR108W INP53Q12271 1107 aa3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms