RNA–Protein interactions for RNA: YDR085C

AFR1, Transcript of Protein required for pheromone-induced projection (shmoo) formation, yeastyeast

Gene AFR1, Length 1,863 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFR1YDR085C MCH1Q07376 486 aa2.26□□□□□ -2.05
AFR1YDR085C NOP6Q07623 225 aaKnown RBP2.26□□□□□ -2.05
AFR1YDR085C CHA1P25379 360 aaKnown RBP2.25□□□□□ -2.05
AFR1YDR085C ZUO1P32527 433 aaKnown RBP2.25□□□□□ -2.05
AFR1YDR085C SEC9P40357 651 aa2.25□□□□□ -2.05
AFR1YDR085C ATP22P50273 684 aaPredicted RBP2.25□□□□□ -2.05
AFR1YDR085C SEH1P53011 349 aaKnown RBP2.25□□□□□ -2.05
AFR1YDR085C YDR541CQ03049 344 aa2.25□□□□□ -2.05
AFR1YDR085C ENT5Q03769 411 aaKnown RBP2.25□□□□□ -2.05
AFR1YDR085C RAX2Q12465 1220 aa2.25□□□□□ -2.05
AFR1YDR085C SMC6Q12749 1114 aa2.25□□□□□ -2.05
AFR1YDR085C MEX67Q99257 599 aaKnown RBP2.25□□□□□ -2.05
AFR1YDR085C RPS18AP0CX55 146 aaKnown RBP2.24□□□□□ -2.05
AFR1YDR085C RPS18BP0CX56 146 aaPredicted RBP2.24□□□□□ -2.05
AFR1YDR085C DTR1P38125 572 aa2.24□□□□□ -2.05
AFR1YDR085C RTT102P53330 157 aa2.24□□□□□ -2.05
AFR1YDR085C REX2P54964 269 aaKnown RBP2.24□□□□□ -2.05
AFR1YDR085C MEH1Q02205 184 aa2.24□□□□□ -2.05
AFR1YDR085C RPL21AQ02753 160 aaKnown RBP2.24□□□□□ -2.05
AFR1YDR085C MSC3Q05812 728 aa2.24□□□□□ -2.05
AFR1YDR085C LDS2Q08218 356 aa2.24□□□□□ -2.05
AFR1YDR085C SPE3Q12074 293 aaKnown RBP2.24□□□□□ -2.05
AFR1YDR085C RPL21BQ12672 160 aaKnown RBP2.24□□□□□ -2.05
AFR1YDR085C RNA1P11745 407 aaKnown RBP2.24□□□□□ -2.05
AFR1YDR085C PFF1P38244 976 aa2.24□□□□□ -2.05
AFR1YDR085C CHL4P38907 458 aa2.24□□□□□ -2.05
AFR1YDR085C HEM14P40012 539 aa2.24□□□□□ -2.05
AFR1YDR085C YFL012WP43580 148 aa2.24□□□□□ -2.05
AFR1YDR085C CIN2P46670 268 aa2.24□□□□□ -2.05
AFR1YDR085C TRF5P48561 642 aaKnown RBP2.24□□□□□ -2.05
AFR1YDR085C VAC7P53950 1165 aa2.24□□□□□ -2.05
AFR1YDR085C PRP38Q00723 242 aaPredicted RBP2.24□□□□□ -2.05
AFR1YDR085C TPI1P00942 248 aaKnown RBP2.23□□□□□ -2.05
AFR1YDR085C SOL2P37262 315 aa2.23□□□□□ -2.05
AFR1YDR085C SRP72P38688 640 aaKnown RBP2.23□□□□□ -2.05
AFR1YDR085C CIK1Q01649 594 aa2.23□□□□□ -2.05
AFR1YDR085C SFM1Q12314 213 aa2.23□□□□□ -2.05
AFR1YDR085C RPL1AP0CX43 217 aaKnown RBP2.22□□□□□ -2.05
AFR1YDR085C RPL1BP0CX44 217 aaKnown RBP2.22□□□□□ -2.05
AFR1YDR085C SEC27P41811 889 aaKnown RBP2.22□□□□□ -2.05
AFR1YDR085C YLR177WQ06251 628 aa2.22□□□□□ -2.05
AFR1YDR085C AAD15Q08361 143 aa2.22□□□□□ -2.05
AFR1YDR085C RPN5Q12250 445 aaKnown RBP2.22□□□□□ -2.05
AFR1YDR085C PUT4P15380 627 aa2.22□□□□□ -2.05
AFR1YDR085C MSP1P28737 362 aa2.22□□□□□ -2.05
AFR1YDR085C TOA1P32773 286 aa2.22□□□□□ -2.05
AFR1YDR085C PDC2P32896 925 aa2.22□□□□□ -2.05
AFR1YDR085C BMT2P38278 337 aa2.22□□□□□ -2.05
AFR1YDR085C WSC4P38739 605 aa2.22□□□□□ -2.05
AFR1YDR085C PEX22P39718 180 aa2.22□□□□□ -2.05
AFR1YDR085C YML6P51998 286 aa2.22□□□□□ -2.05
AFR1YDR085C ERO1Q03103 563 aa2.22□□□□□ -2.05
AFR1YDR085C GYL1Q04322 720 aa2.22□□□□□ -2.05
AFR1YDR085C MAS2P11914 482 aa2.21□□□□□ -2.06
AFR1YDR085C VMA8P32610 256 aaKnown RBP2.21□□□□□ -2.06
AFR1YDR085C ANP1P32629 500 aa2.21□□□□□ -2.06
AFR1YDR085C WSS1P38838 269 aa2.21□□□□□ -2.06
AFR1YDR085C YHR177WP38867 453 aa2.21□□□□□ -2.06
AFR1YDR085C MNL1P38888 796 aa2.21□□□□□ -2.06
AFR1YDR085C YER184CP39961 794 aa2.21□□□□□ -2.06
AFR1YDR085C CTK3P46963 296 aaPredicted RBP2.21□□□□□ -2.06
AFR1YDR085C YPL107WQ02873 248 aa2.21□□□□□ -2.06
AFR1YDR085C YOR376WQ08900 122 aa2.21□□□□□ -2.06
AFR1YDR085C HMS1Q12398 434 aa2.21□□□□□ -2.06
AFR1YDR085C MLH1P38920 769 aa2.2□□□□□ -2.06
AFR1YDR085C ASN2P49090 572 aaKnown RBP2.2□□□□□ -2.06
AFR1YDR085C IPK1Q06667 281 aa2.2□□□□□ -2.06
AFR1YDR085C GAT3Q07928 141 aa2.2□□□□□ -2.06
AFR1YDR085C TIR4Q12218 487 aaPredicted RBP2.2□□□□□ -2.06
AFR1YDR085C PRM7Q12459 698 aa2.2□□□□□ -2.06
AFR1YDR085C RRP7P25368 297 aaPredicted RBP2.2□□□□□ -2.06
AFR1YDR085C MPE1P35728 441 aaKnown RBP2.2□□□□□ -2.06
AFR1YDR085C KAP104P38217 918 aaKnown RBP2.2□□□□□ -2.06
AFR1YDR085C SPP381P38282 291 aaPredicted RBP2.2□□□□□ -2.06
AFR1YDR085C EFM4P40516 257 aa2.2□□□□□ -2.06
AFR1YDR085C HST1P53685 503 aa2.2□□□□□ -2.06
AFR1YDR085C YDR115WQ04598 105 aa2.2□□□□□ -2.06
AFR1YDR085C HIF1Q12373 385 aa2.2□□□□□ -2.06
AFR1YDR085C HEM4P06174 275 aa2.19□□□□□ -2.06
AFR1YDR085C FMT1P32785 401 aa2.19□□□□□ -2.06
AFR1YDR085C SMP1P38128 452 aa2.19□□□□□ -2.06
AFR1YDR085C PFS2P42841 465 aaKnown RBP2.19□□□□□ -2.06
AFR1YDR085C YGR067CP53243 804 aa2.19□□□□□ -2.06
AFR1YDR085C ATP16Q12165 160 aa2.19□□□□□ -2.06
AFR1YDR085C YOL085CQ99345 113 aa2.19□□□□□ -2.06
AFR1YDR085C ASP3-2P0CX77 362 aa2.18□□□□□ -2.06
AFR1YDR085C ASP3-3P0CX78 362 aa2.18□□□□□ -2.06
AFR1YDR085C ASP3-4P0CX79 362 aa2.18□□□□□ -2.06
AFR1YDR085C ASP3-1P0CZ17 362 aa2.18□□□□□ -2.06
AFR1YDR085C RPL16AP26784 199 aaKnown RBP2.18□□□□□ -2.06
AFR1YDR085C LDS1P31379 325 aa2.18□□□□□ -2.06
AFR1YDR085C LCB2P40970 561 aa2.18□□□□□ -2.06
AFR1YDR085C YMR010WQ03687 405 aa2.18□□□□□ -2.06
AFR1YDR085C FSH2Q05015 223 aa2.18□□□□□ -2.06
AFR1YDR085C RPS19AP07280 144 aaKnown RBP2.18□□□□□ -2.06
AFR1YDR085C RPS19BP07281 144 aaPredicted RBP2.18□□□□□ -2.06
AFR1YDR085C UNG1P12887 359 aa2.18□□□□□ -2.06
AFR1YDR085C YDL109CQ12103 647 aa2.18□□□□□ -2.06
AFR1YDR085C YPS3Q12303 508 aa2.18□□□□□ -2.06
AFR1YDR085C MRPL8P22353 238 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms