RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	NIT2	P47016	307 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	LOH1	P47055	219 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	ARH1	P48360	493 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	MRX6	P48564	524 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	ALG12	P53730	551 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	KIN4	Q01919	800 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	TRM12	Q04235	462 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	MRI1	Q06489	411 aa	Known RBP	4.97	□□□□□ -1.61
DBF4	YDR052C	YDL057W	Q07379	328 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	YDR018C	Q12185	396 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	YPL066W	Q12194	479 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	YOP1	Q12402	180 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	YOL159C-A	Q3E769	90 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	MTR10	Q99189	972 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	Q0144	Q9ZZW2	109 aa		4.97	□□□□□ -1.61
DBF4	YDR052C	INH1	P01097	85 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	RPB3	P16370	318 aa	Known RBP	4.96	□□□□□ -1.62
DBF4	YDR052C	SPO7	P18410	259 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	ERG6	P25087	383 aa	Known RBP	4.96	□□□□□ -1.62
DBF4	YDR052C	GID7	P25569	745 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	ADE1	P27616	306 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	RAD54	P32863	898 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	SDH3	P33421	198 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	MSN2	P33748	704 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	FRE2	P36033	711 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	ATG8	P38182	117 aa	RIP-Chip data	4.96	□□□□□ -1.62	not detected
DBF4	YDR052C	EHT1	P38295	451 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	PRE3	P38624	215 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	YIL108W	P40483	696 aa	Known RBP	4.96	□□□□□ -1.62
DBF4	YDR052C	YJL045W	P47052	634 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	NSA1	P53136	463 aa	Predicted RBP	4.96	□□□□□ -1.62
DBF4	YDR052C	KTR6	P54070	446 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	GPD1	Q00055	391 aa	Known RBP	4.96	□□□□□ -1.62
DBF4	YDR052C	RKM2	Q03942	479 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	GIM5	Q04493	163 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	GPI11	Q06636	219 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	LDB18	Q07887	179 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	YLR046C	Q12253	270 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	PFK27	Q12471	397 aa	Predicted RBP	4.96	□□□□□ -1.62
DBF4	YDR052C	DST1	P07273	309 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	ALG7	P07286	448 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	RHB1	P25378	209 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	YCR102C	P25608	368 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	SFP1	P32432	683 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	SHE3	P38272	425 aa	Known RBP	4.96	□□□□□ -1.62
DBF4	YDR052C	AFG3	P39925	761 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	SKP2	P42843	763 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	YGL159W	P53110	370 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	RRT6	P53117	311 aa	Predicted RBP	4.96	□□□□□ -1.62
DBF4	YDR052C	GUP1	P53154	560 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	RHO3	Q00245	231 aa	Known RBP	4.96	□□□□□ -1.62
DBF4	YDR052C	ARG5,6	Q01217	863 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
DBF4	YDR052C	STD1	Q02794	444 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	LRS4	Q04087	347 aa	Known RBP	4.96	□□□□□ -1.62
DBF4	YDR052C	RIF2	Q06208	395 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	YLR179C	Q06252	201 aa	Known RBP	4.96	□□□□□ -1.62
DBF4	YDR052C	YPL245W	Q12179	454 aa	Known RBP	4.96	□□□□□ -1.62
DBF4	YDR052C	EFG1	Q3E705	233 aa	Known RBP	4.96	□□□□□ -1.62
DBF4	YDR052C	SUS1	Q6WNK7	96 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	HBN1	Q96VH4	193 aa		4.96	□□□□□ -1.62
DBF4	YDR052C	RPP2A	P05319	106 aa	Known RBP	4.95	□□□□□ -1.62
DBF4	YDR052C	RHO2	P06781	192 aa		4.95	□□□□□ -1.62
DBF4	YDR052C	RNR1	P21524	888 aa	Known RBP	4.95	□□□□□ -1.62
DBF4	YDR052C	MNE1	P24720	663 aa		4.95	□□□□□ -1.62
DBF4	YDR052C	PRP45	P28004	379 aa	Predicted RBP	4.95	□□□□□ -1.62
DBF4	YDR052C	HSL7	P38274	827 aa		4.95	□□□□□ -1.62
DBF4	YDR052C	YJL218W	P40892	196 aa	Known RBP	4.95	□□□□□ -1.62
DBF4	YDR052C	ARF3	P40994	183 aa	RIP-Chip data	4.95	□□□□□ -1.62	not detected
DBF4	YDR052C	CAK1	P43568	368 aa	Predicted RBP	4.95	□□□□□ -1.62
DBF4	YDR052C	VPS70	P47161	811 aa		4.95	□□□□□ -1.62
DBF4	YDR052C	YJR154W	P47181	346 aa		4.95	□□□□□ -1.62
DBF4	YDR052C	ASK10	P48361	1146 aa		4.95	□□□□□ -1.62
DBF4	YDR052C	YDL183C	P48569	320 aa		4.95	□□□□□ -1.62
DBF4	YDR052C	YGL185C	P53100	379 aa		4.95	□□□□□ -1.62
DBF4	YDR052C	TNA1	P53322	534 aa		4.95	□□□□□ -1.62
DBF4	YDR052C	BUD32	P53323	261 aa		4.95	□□□□□ -1.62
DBF4	YDR052C	SHH3	Q04487	196 aa		4.95	□□□□□ -1.62
DBF4	YDR052C	SEC13	Q04491	297 aa	Known RBP	4.95	□□□□□ -1.62
DBF4	YDR052C	DFG5	Q05031	458 aa		4.95	□□□□□ -1.62
DBF4	YDR052C	FRQ1	Q06389	190 aa		4.95	□□□□□ -1.62
DBF4	YDR052C	INP53	Q12271	1107 aa		4.95	□□□□□ -1.62
DBF4	YDR052C	RTN2	Q12443	393 aa		4.95	□□□□□ -1.62
DBF4	YDR052C	CMR1	Q12510	522 aa	Known RBP	4.95	□□□□□ -1.62
DBF4	YDR052C	CDC33	P07260	213 aa	Known RBP	4.94	□□□□□ -1.62
DBF4	YDR052C	ASP3-2	P0CX77	362 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	ASP3-3	P0CX78	362 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	ASP3-4	P0CX79	362 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	ASP3-1	P0CZ17	362 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	CKA1	P15790	372 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	IDP1	P21954	428 aa	Known RBP	4.94	□□□□□ -1.62
DBF4	YDR052C	TAH1	P25638	111 aa	Predicted RBP	4.94	□□□□□ -1.62
DBF4	YDR052C	PEX4	P29340	183 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	HMX1	P32339	317 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	EMP24	P32803	203 aa	Known RBP	4.94	□□□□□ -1.62
DBF4	YDR052C	GMH1	P36125	273 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	MRPL4	P36517	319 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	APE3	P37302	537 aa	Known RBP	4.94	□□□□□ -1.62
DBF4	YDR052C	ATG12	P38316	186 aa		4.94	□□□□□ -1.62
DBF4	YDR052C	NPP2	P39997	493 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms