RNA–Protein interactions for RNA: YDL113C

ATG20, Transcript of Sorting nexin family member, yeastyeast

Gene ATG20, Length 1,923 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG20YDL113C RRT8Q08219 342 aa4.91□□□□□ -1.62
ATG20YDL113C YPL119C-AQ3E751 87 aa4.91□□□□□ -1.62
ATG20YDL113C MEX67Q99257 599 aaKnown RBP4.91□□□□□ -1.62
ATG20YDL113C MED11Q99278 115 aa4.91□□□□□ -1.62
ATG20YDL113C ZWF1P11412 505 aaKnown RBP4.9□□□□□ -1.62
ATG20YDL113C SCL1P21243 252 aaKnown RBP4.9□□□□□ -1.62
ATG20YDL113C PPH21P23594 369 aa4.9□□□□□ -1.62
ATG20YDL113C YCL049CP25577 312 aa4.9□□□□□ -1.62
ATG20YDL113C NTH1P32356 751 aa4.9□□□□□ -1.62
ATG20YDL113C SEC66P33754 206 aa4.9□□□□□ -1.62
ATG20YDL113C FAT1P38225 669 aa4.9□□□□□ -1.62
ATG20YDL113C MTG2P38860 518 aa4.9□□□□□ -1.62
ATG20YDL113C AXL2P38928 823 aa4.9□□□□□ -1.62
ATG20YDL113C LYS1P38998 373 aaRIP-Chip data4.9□□□□□ -1.62not detected
ATG20YDL113C CEM1P39525 442 aa4.9□□□□□ -1.62
ATG20YDL113C SPO73P40031 143 aa4.9□□□□□ -1.62
ATG20YDL113C NEO1P40527 1151 aa4.9□□□□□ -1.62
ATG20YDL113C RPL10P41805 221 aaKnown RBP4.9□□□□□ -1.62
ATG20YDL113C SWP82P43554 623 aa4.9□□□□□ -1.62
ATG20YDL113C BOP2Q06150 570 aa4.9□□□□□ -1.62
ATG20YDL113C YFT2Q06676 274 aa4.9□□□□□ -1.62
ATG20YDL113C BRE4Q07660 1125 aa4.9□□□□□ -1.62
ATG20YDL113C GSH2Q08220 491 aa4.9□□□□□ -1.62
ATG20YDL113C YOR389WQ08912 624 aa4.9□□□□□ -1.62
ATG20YDL113C BMT6Q12291 365 aa4.9□□□□□ -1.62
ATG20YDL113C PNO1Q99216 274 aaKnown RBP4.9□□□□□ -1.62
ATG20YDL113C STE7P06784 515 aa4.89□□□□□ -1.63
ATG20YDL113C LAT1P12695 482 aaKnown RBP4.89□□□□□ -1.63
ATG20YDL113C HOP1P20050 605 aa4.89□□□□□ -1.63
ATG20YDL113C CLB2P24869 491 aa4.89□□□□□ -1.63
ATG20YDL113C IDH1P28834 360 aaKnown RBP RIP-Chip data4.89□□□□□ -1.63not detected
ATG20YDL113C VMA6P32366 345 aaKnown RBP4.89□□□□□ -1.63
ATG20YDL113C NUF2P33895 451 aa4.89□□□□□ -1.63
ATG20YDL113C HCS1P34243 683 aa4.89□□□□□ -1.63
ATG20YDL113C TPO5P36029 618 aa4.89□□□□□ -1.63
ATG20YDL113C PIM1P36775 1133 aa4.89□□□□□ -1.63
ATG20YDL113C SHM2P37291 469 aaKnown RBP4.89□□□□□ -1.63
ATG20YDL113C ASC1P38011 319 aaKnown RBP4.89□□□□□ -1.63
ATG20YDL113C SCO2P38072 301 aa4.89□□□□□ -1.63
ATG20YDL113C ATG14P38270 344 aa4.89□□□□□ -1.63
ATG20YDL113C EHT1P38295 451 aa4.89□□□□□ -1.63
ATG20YDL113C BIG1P38813 335 aa4.89□□□□□ -1.63
ATG20YDL113C PFS1P38872 237 aa4.89□□□□□ -1.63
ATG20YDL113C IPT1P38954 527 aa4.89□□□□□ -1.63
ATG20YDL113C SOP4P39543 234 aaPredicted RBP4.89□□□□□ -1.63
ATG20YDL113C AST2P39945 430 aaKnown RBP4.89□□□□□ -1.63
ATG20YDL113C TED1P40533 473 aa4.89□□□□□ -1.63
ATG20YDL113C YGR201CP42936 225 aa4.89□□□□□ -1.63
ATG20YDL113C IRC5P43610 853 aa4.89□□□□□ -1.63
ATG20YDL113C CIS3P47001 227 aa4.89□□□□□ -1.63
ATG20YDL113C ART5P53244 586 aaKnown RBP4.89□□□□□ -1.63
ATG20YDL113C YPL107WQ02873 248 aa4.89□□□□□ -1.63
ATG20YDL113C RSC9Q03124 581 aa4.89□□□□□ -1.63
ATG20YDL113C YMD8Q03697 442 aa4.89□□□□□ -1.63
ATG20YDL113C TRM82Q03774 444 aa4.89□□□□□ -1.63
ATG20YDL113C YDR514CQ04408 483 aa4.89□□□□□ -1.63
ATG20YDL113C HLR1Q04429 423 aa4.89□□□□□ -1.63
ATG20YDL113C RQC1Q05468 723 aaKnown RBP4.89□□□□□ -1.63
ATG20YDL113C YLR345WQ06137 509 aa4.89□□□□□ -1.63
ATG20YDL113C NFI1Q12216 726 aa4.89□□□□□ -1.63
ATG20YDL113C YGK3Q12222 375 aaPredicted RBP4.89□□□□□ -1.63
ATG20YDL113C PST2Q12335 198 aaKnown RBP4.89□□□□□ -1.63
ATG20YDL113C CTS1P29029 562 aa4.89□□□□□ -1.63
ATG20YDL113C UTP11P34247 250 aaPredicted RBP4.89□□□□□ -1.63
ATG20YDL113C FMP46P36141 133 aaKnown RBP4.89□□□□□ -1.63
ATG20YDL113C BAT1P38891 393 aaKnown RBP4.89□□□□□ -1.63
ATG20YDL113C PRE6P40303 254 aaKnown RBP4.89□□□□□ -1.63
ATG20YDL113C GPI8P49018 411 aa4.89□□□□□ -1.63
ATG20YDL113C MTQ1P53944 314 aa4.89□□□□□ -1.63
ATG20YDL113C RIM13Q03792 727 aa4.89□□□□□ -1.63
ATG20YDL113C MGR3Q04472 501 aa4.89□□□□□ -1.63
ATG20YDL113C ARP10Q04549 284 aa4.89□□□□□ -1.63
ATG20YDL113C HPF1Q05164 967 aa4.89□□□□□ -1.63
ATG20YDL113C FMP45Q07651 309 aa4.89□□□□□ -1.63
ATG20YDL113C MMT2Q08970 484 aa4.89□□□□□ -1.63
ATG20YDL113C MSH5Q12175 901 aa4.89□□□□□ -1.63
ATG20YDL113C HER1Q12276 1246 aa4.89□□□□□ -1.63
ATG20YDL113C MRX4Q12467 430 aa4.89□□□□□ -1.63
ATG20YDL113C BEM2P39960 2167 aaKnown RBP4.88□□□□□ -1.63
ATG20YDL113C STT4P37297 1900 aa4.88□□□□□ -1.63
ATG20YDL113C MSB2P32334 1306 aa4.88□□□□□ -1.63
ATG20YDL113C SAM35P14693 329 aa4.88□□□□□ -1.63
ATG20YDL113C DBP3P20447 523 aaKnown RBP4.88□□□□□ -1.63
ATG20YDL113C VPS33P20795 691 aa4.88□□□□□ -1.63
ATG20YDL113C SRX1P36077 127 aa4.88□□□□□ -1.63
ATG20YDL113C MRPL37P36532 105 aa4.88□□□□□ -1.63
ATG20YDL113C SBE22P38814 852 aa4.88□□□□□ -1.63
ATG20YDL113C CTF8P38877 133 aa4.88□□□□□ -1.63
ATG20YDL113C GDI1P39958 451 aaKnown RBP4.88□□□□□ -1.63
ATG20YDL113C MET28P40573 187 aa4.88□□□□□ -1.63
ATG20YDL113C STE24P47154 453 aa4.88□□□□□ -1.63
ATG20YDL113C HOS2P53096 452 aaPredicted RBP4.88□□□□□ -1.63
ATG20YDL113C COG5P53951 403 aa4.88□□□□□ -1.63
ATG20YDL113C RHO4Q00246 291 aa4.88□□□□□ -1.63
ATG20YDL113C MAK3Q03503 176 aa4.88□□□□□ -1.63
ATG20YDL113C FMP42Q04991 504 aa4.88□□□□□ -1.63
ATG20YDL113C VPS36Q06696 566 aa4.88□□□□□ -1.63
ATG20YDL113C RPN13O13563 156 aa4.87□□□□□ -1.63
ATG20YDL113C MET2P08465 486 aa4.87□□□□□ -1.63
ATG20YDL113C NFS1P25374 497 aa4.87□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms