RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	NFI1	Q12216	726 aa		5.05	□□□□□ -1.6
SIR2	YDL042C	TFB5	Q3E7C1	72 aa	Predicted RBP	5.05	□□□□□ -1.6
SIR2	YDL042C	AUS1	Q08409	1394 aa		5.05	□□□□□ -1.6
SIR2	YDL042C	APC1	P53886	1748 aa		5.05	□□□□□ -1.6
SIR2	YDL042C	FKS3	Q04952	1785 aa		5.05	□□□□□ -1.6
SIR2	YDL042C	CYC3	P06182	269 aa		5.05	□□□□□ -1.6
SIR2	YDL042C	NAM9	P27929	486 aa		5.05	□□□□□ -1.6
SIR2	YDL042C	RFS1	P38234	210 aa	Known RBP	5.05	□□□□□ -1.6
SIR2	YDL042C	ROM2	P51862	1356 aa	Known RBP	5.05	□□□□□ -1.6
SIR2	YDL042C	CWC25	P53854	179 aa	Known RBP	5.05	□□□□□ -1.6
SIR2	YDL042C	NDE2	Q07500	545 aa		5.05	□□□□□ -1.6
SIR2	YDL042C	CAP2	P13517	287 aa		5.04	□□□□□ -1.6
SIR2	YDL042C	DAP2	P18962	818 aa		5.04	□□□□□ -1.6
SIR2	YDL042C	EXG1	P23776	448 aa	Known RBP	5.04	□□□□□ -1.6
SIR2	YDL042C	MNS1	P32906	549 aa		5.04	□□□□□ -1.6
SIR2	YDL042C	AVT5	P38176	459 aa		5.04	□□□□□ -1.6
SIR2	YDL042C	SPP381	P38282	291 aa	Predicted RBP	5.04	□□□□□ -1.6
SIR2	YDL042C	ATM1	P40416	690 aa		5.04	□□□□□ -1.6
SIR2	YDL042C	YPI1	P43587	155 aa		5.04	□□□□□ -1.6
SIR2	YDL042C	STE24	P47154	453 aa		5.04	□□□□□ -1.6
SIR2	YDL042C	PMT5	P52867	743 aa		5.04	□□□□□ -1.6
SIR2	YDL042C	SPR6	Q01684	191 aa		5.04	□□□□□ -1.6
SIR2	YDL042C	MHP1	P43638	1398 aa		5.03	□□□□□ -1.6
SIR2	YDL042C	PHO84	P25297	587 aa	Known RBP	5.03	□□□□□ -1.6
SIR2	YDL042C	SKT5	P34226	696 aa		5.03	□□□□□ -1.6
SIR2	YDL042C	ARF1	P11076	181 aa	Known RBP	5.02	□□□□□ -1.61
SIR2	YDL042C	DOA1	P36037	715 aa		5.02	□□□□□ -1.61
SIR2	YDL042C	COX14	P39103	70 aa		5.02	□□□□□ -1.61
SIR2	YDL042C	REE1	P40893	198 aa		5.02	□□□□□ -1.61
SIR2	YDL042C	YGR117C	P53270	476 aa		5.02	□□□□□ -1.61
SIR2	YDL042C	NUP116	Q02630	1113 aa		5.02	□□□□□ -1.61
SIR2	YDL042C	AAD15	Q08361	143 aa		5.02	□□□□□ -1.61
SIR2	YDL042C	CUE5	Q08412	411 aa	Known RBP	5.02	□□□□□ -1.61
SIR2	YDL042C	ARO2	P28777	376 aa	Known RBP	5.02	□□□□□ -1.61
SIR2	YDL042C	PHA2	P32452	334 aa		5.02	□□□□□ -1.61
SIR2	YDL042C	ADH5	P38113	351 aa	Known RBP	5.02	□□□□□ -1.61
SIR2	YDL042C	YGR016W	P53209	190 aa		5.02	□□□□□ -1.61
SIR2	YDL042C	MLP1	Q02455	1875 aa	Known RBP	5.02	□□□□□ -1.61
SIR2	YDL042C	SIR4	P11978	1358 aa		5.01	□□□□□ -1.61
SIR2	YDL042C	POM152	P39685	1337 aa		5.01	□□□□□ -1.61
SIR2	YDL042C	RPS8A	P0CX39	200 aa	Known RBP	5.01	□□□□□ -1.61
SIR2	YDL042C	RPS8B	P0CX40	200 aa	Known RBP	5.01	□□□□□ -1.61
SIR2	YDL042C	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
SIR2	YDL042C	FAA1	P30624	700 aa	Known RBP	5.01	□□□□□ -1.61
SIR2	YDL042C	KAR9	P32526	644 aa		5.01	□□□□□ -1.61
SIR2	YDL042C	YEF1	P32622	495 aa		5.01	□□□□□ -1.61
SIR2	YDL042C	SBE22	P38814	852 aa		5.01	□□□□□ -1.61
SIR2	YDL042C	CAJ1	P39101	391 aa		5.01	□□□□□ -1.61
SIR2	YDL042C	YIL029C	P40538	142 aa		5.01	□□□□□ -1.61
SIR2	YDL042C	TOS2	P50078	622 aa		5.01	□□□□□ -1.61
SIR2	YDL042C	YGL242C	P53066	181 aa		5.01	□□□□□ -1.61
SIR2	YDL042C	HRI1	Q05905	244 aa	Known RBP	5.01	□□□□□ -1.61
SIR2	YDL042C	MRPL35	Q06678	367 aa		5.01	□□□□□ -1.61
SIR2	YDL042C	ASA1	Q06822	443 aa		5.01	□□□□□ -1.61
SIR2	YDL042C	TMS1	Q12116	473 aa		5.01	□□□□□ -1.61
SIR2	YDL042C	TPK3	P05986	398 aa		5	□□□□□ -1.61
SIR2	YDL042C	DAL2	P25335	343 aa		5	□□□□□ -1.61
SIR2	YDL042C	MSG5	P38590	489 aa		5	□□□□□ -1.61
SIR2	YDL042C	YHR177W	P38867	453 aa		5	□□□□□ -1.61
SIR2	YDL042C	PAN6	P40459	309 aa		5	□□□□□ -1.61
SIR2	YDL042C	SPG5	P42933	373 aa		5	□□□□□ -1.61
SIR2	YDL042C	RRP46	P53256	223 aa	Predicted RBP	5	□□□□□ -1.61
SIR2	YDL042C	SCW10	Q04951	389 aa		5	□□□□□ -1.61
SIR2	YDL042C	MDM36	Q06820	579 aa		5	□□□□□ -1.61
SIR2	YDL042C	LDS2	Q08218	356 aa		5	□□□□□ -1.61
SIR2	YDL042C	UBA1	P22515	1024 aa	Known RBP	4.99	□□□□□ -1.61
SIR2	YDL042C	POP5	P28005	173 aa		4.99	□□□□□ -1.61
SIR2	YDL042C	MDE1	P47095	244 aa		4.99	□□□□□ -1.61
SIR2	YDL042C	NOP6	Q07623	225 aa	Known RBP	4.99	□□□□□ -1.61
SIR2	YDL042C	YOP1	Q12402	180 aa		4.99	□□□□□ -1.61
SIR2	YDL042C	SCH9	P11792	824 aa	Known RBP	4.99	□□□□□ -1.61
SIR2	YDL042C	PET123	P17558	318 aa		4.99	□□□□□ -1.61
SIR2	YDL042C	YGR210C	P42942	411 aa		4.99	□□□□□ -1.61
SIR2	YDL042C	ATP22	P50273	684 aa	Predicted RBP	4.99	□□□□□ -1.61
SIR2	YDL042C	MRM2	P53123	320 aa		4.99	□□□□□ -1.61
SIR2	YDL042C	MTQ1	P53944	314 aa		4.99	□□□□□ -1.61
SIR2	YDL042C	YDR286C	Q05530	114 aa		4.99	□□□□□ -1.61
SIR2	YDL042C	SNF2	P22082	1703 aa		4.98	□□□□□ -1.61
SIR2	YDL042C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
SIR2	YDL042C	SUP35	P05453	685 aa	Known RBP	4.98	□□□□□ -1.61
SIR2	YDL042C	SSC1	P0CS90	654 aa	Known RBP	4.98	□□□□□ -1.61
SIR2	YDL042C	YBL028C	P38202	106 aa		4.98	□□□□□ -1.61
SIR2	YDL042C	SIF2	P38262	535 aa		4.98	□□□□□ -1.61
SIR2	YDL042C	BTN2	P53286	410 aa		4.98	□□□□□ -1.61
SIR2	YDL042C	COS1	P53822	381 aa		4.98	□□□□□ -1.61
SIR2	YDL042C	DBP9	Q06218	594 aa	Known RBP	4.97	□□□□□ -1.61
SIR2	YDL042C	RSA1	Q08932	381 aa		4.97	□□□□□ -1.61
SIR2	YDL042C	RNA1	P11745	407 aa	Known RBP	4.96	□□□□□ -1.61
SIR2	YDL042C	MCR1	P36060	302 aa	Known RBP	4.96	□□□□□ -1.61
SIR2	YDL042C	RRN9	P53437	365 aa		4.96	□□□□□ -1.61
SIR2	YDL042C	YNR068C	P53754	272 aa		4.96	□□□□□ -1.61
SIR2	YDL042C	LOT6	Q07923	191 aa		4.96	□□□□□ -1.61
SIR2	YDL042C	PGC1	Q08959	321 aa		4.96	□□□□□ -1.61
SIR2	YDL042C	RPO41	P13433	1351 aa	Known RBP	4.96	□□□□□ -1.62
SIR2	YDL042C	NAM2	P11325	894 aa		4.96	□□□□□ -1.62
SIR2	YDL042C	PSO2	P30620	661 aa		4.96	□□□□□ -1.62
SIR2	YDL042C	DPH5	P32469	300 aa	Predicted RBP	4.96	□□□□□ -1.62
SIR2	YDL042C	YJR085C	P47131	105 aa	Known RBP	4.96	□□□□□ -1.62
SIR2	YDL042C	TOA2	P32774	122 aa		4.95	□□□□□ -1.62
SIR2	YDL042C	GPX2	P38143	162 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms