RNA–Protein interactions for RNA: YCL014W

BUD3, Transcript of Protein involved in bud-site selection, yeast

Gene BUD3, Length 4,911 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD3	YCL014W	MRP21	P38175	177 aa		0.99	□□□□□ -2.25
BUD3	YCL014W	MED8	P38304	223 aa		0.99	□□□□□ -2.25
BUD3	YCL014W	RPP1	P38786	293 aa		0.99	□□□□□ -2.25
BUD3	YCL014W	RRP4	P38792	359 aa	Known RBP	0.99	□□□□□ -2.25
BUD3	YCL014W	YHR210C	P38893	341 aa		0.99	□□□□□ -2.25
BUD3	YCL014W	GET2	P40056	285 aa		0.99	□□□□□ -2.25
BUD3	YCL014W	ALG2	P43636	503 aa		0.99	□□□□□ -2.25
BUD3	YCL014W	SPC1	P46965	94 aa		0.99	□□□□□ -2.25
BUD3	YCL014W	VPS55	P47111	140 aa		0.99	□□□□□ -2.25
BUD3	YCL014W	YJR079W	P47126	109 aa		0.99	□□□□□ -2.25
BUD3	YCL014W	MTO1	P53070	669 aa		0.99	□□□□□ -2.25
BUD3	YCL014W	BIO4	P53630	237 aa		0.99	□□□□□ -2.25
BUD3	YCL014W	ESF2	P53743	316 aa	Known RBP	0.99	□□□□□ -2.25
BUD3	YCL014W	ALO1	P54783	526 aa	Known RBP	0.99	□□□□□ -2.25
BUD3	YCL014W	SKI8	Q02793	397 aa	Predicted RBP	0.99	□□□□□ -2.25
BUD3	YCL014W	NGL3	Q03210	505 aa		0.99	□□□□□ -2.25
BUD3	YCL014W	VPS71	Q03433	280 aa		0.99	□□□□□ -2.25
BUD3	YCL014W	ADH6	Q04894	360 aa	Known RBP	0.99	□□□□□ -2.25
BUD3	YCL014W	CDC123	Q05791	360 aa		0.99	□□□□□ -2.25
BUD3	YCL014W	POM33	Q12164	279 aa		0.99	□□□□□ -2.25
BUD3	YCL014W	ROM2	P51862	1356 aa	Known RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	GAL10	P04397	699 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	CLB4	P24871	460 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	ICL1	P28240	557 aa	Predicted RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	MRPL10	P36520	322 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.98	□□□□□ -2.25	not detected
BUD3	YCL014W	ARN1	P38731	627 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	PEX28	P38848	579 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	EXO1	P39875	702 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	AVT7	P40501	490 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	PFA3	P42836	336 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	PHO86	P46956	311 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	YJL027C	P47063	138 aa	Predicted RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	JAC1	P53193	184 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	YGR021W	P53212	290 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	FHN1	P53279	174 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	YMR244W	Q04018	355 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	MCH4	Q08268	501 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	NDD1	Q08887	554 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	MLH3	Q12083	715 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	YOL107W	Q12239	342 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	RAX2	Q12465	1220 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	ZPS1	Q12512	249 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	RIB3	Q99258	208 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	ADE6	P38972	1358 aa	Known RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	MAG1	P22134	296 aa	Known RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	YCR102C	P25608	368 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	ATG15	P25641	520 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	ACH1	P32316	526 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	ARP2	P32381	391 aa	Known RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	CBP4	P37267	147 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	ECM31	P38122	312 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	ICS2	P38284	255 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	ARO9	P38840	513 aa	Predicted RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	RPT2	P40327	437 aa	Known RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	QRI7	P43122	407 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	HSH155	P49955	971 aa	Known RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	MUP1	P50276	574 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.98	□□□□□ -2.25	not detected
BUD3	YCL014W	UGO1	Q03327	502 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	YDR109C	Q04585	715 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	YPR172W	Q06608	200 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	OSW1	Q08692	278 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	HNT3	Q08702	217 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	TMS1	Q12116	473 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	RRI2	Q12348	645 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	YBR085C-A	O43137	85 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	RPS17A	P02407	136 aa	Known RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	RPL43A	P0CX25	92 aa	Known RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	RPL43B	P0CX26	92 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	RPS17B	P14127	136 aa	Known RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	GLN3	P18494	730 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	SIR1	P21691	654 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	APL1	P27351	700 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	IDH2	P28241	369 aa	Known RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	PRE4	P30657	266 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	TPS2	P31688	896 aa	Known RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	COT1	P32798	439 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	NTF2	P33331	125 aa	Known RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	STO1	P34160	861 aa	Known RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	YSW1	P38280	609 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	YHR177W	P38867	453 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	YER121W	P40076	114 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	NUP82	P40368	713 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	UBP6	P43593	499 aa	Known RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	IRC6	P43615	237 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	EMC2	P47133	292 aa	Known RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	PRP38	Q00723	242 aa	Predicted RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	DYN3	Q04949	312 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	STP4	Q07351	490 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	RSF2	P46974	1380 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	CBP2	P03874	630 aa	Predicted RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	ARO3	P14843	370 aa	Known RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	RPI1	P23250	407 aa	Known RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	GDH2	P33327	1092 aa	Known RBP	0.98	□□□□□ -2.25
BUD3	YCL014W	SPO23	P33757	523 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	YBR144C	P34215	104 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	GPX1	P36014	167 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	YKL071W	P36086	256 aa		0.98	□□□□□ -2.25
BUD3	YCL014W	SWD2	P36104	329 aa	Predicted RBP	0.98	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms