RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C HHF1P02309 103 aaKnown RBP2.82□□□□□ -1.96
SHG1YBR258C IMA3P0CW40 589 aa2.82□□□□□ -1.96
SHG1YBR258C IMA4P0CW41 589 aa2.82□□□□□ -1.96
SHG1YBR258C HOM3P10869 527 aa2.82□□□□□ -1.96
SHG1YBR258C RAD57P25301 460 aa2.82□□□□□ -1.96
SHG1YBR258C KAR9P32526 644 aa2.82□□□□□ -1.96
SHG1YBR258C ZTA1P38230 334 aaKnown RBP2.82□□□□□ -1.96
SHG1YBR258C PRM5P40476 318 aa2.82□□□□□ -1.96
SHG1YBR258C YGR210CP42942 411 aa2.82□□□□□ -1.96
SHG1YBR258C YFL067WP43537 175 aa2.82□□□□□ -1.96
SHG1YBR258C HER2Q03557 464 aa2.82□□□□□ -1.96
SHG1YBR258C PPM1Q04081 328 aa2.82□□□□□ -1.96
SHG1YBR258C NDL1Q06568 189 aa2.82□□□□□ -1.96
SHG1YBR258C IMA2Q08295 589 aa2.82□□□□□ -1.96
SHG1YBR258C RSA1Q08932 381 aa2.82□□□□□ -1.96
SHG1YBR258C AEP3Q12089 606 aa2.82□□□□□ -1.96
SHG1YBR258C TMS1Q12116 473 aa2.82□□□□□ -1.96
SHG1YBR258C MDN1Q12019 4910 aaKnown RBP2.82□□□□□ -1.96
SHG1YBR258C SLY1P22213 666 aa2.81□□□□□ -1.96
SHG1YBR258C CSE2P33308 149 aa2.81□□□□□ -1.96
SHG1YBR258C YBL059WP34224 193 aa2.81□□□□□ -1.96
SHG1YBR258C PEX5P35056 612 aa2.81□□□□□ -1.96
SHG1YBR258C YHL026CP38740 315 aa2.81□□□□□ -1.96
SHG1YBR258C MTC6P38849 526 aa2.81□□□□□ -1.96
SHG1YBR258C SFH5P47008 294 aa2.81□□□□□ -1.96
SHG1YBR258C GOR1P53839 350 aa2.81□□□□□ -1.96
SHG1YBR258C TOF1P53840 1238 aa2.81□□□□□ -1.96
SHG1YBR258C BCH1Q05029 724 aa2.81□□□□□ -1.96
SHG1YBR258C RRP9Q06506 573 aaKnown RBP2.81□□□□□ -1.96
SHG1YBR258C TSR1Q07381 788 aaKnown RBP2.81□□□□□ -1.96
SHG1YBR258C SNX3Q08826 162 aaKnown RBP2.81□□□□□ -1.96
SHG1YBR258C YOR387CQ08910 206 aa2.81□□□□□ -1.96
SHG1YBR258C FDH1Q08911 376 aa2.81□□□□□ -1.96
SHG1YBR258C VPS54Q12071 889 aa2.81□□□□□ -1.96
SHG1YBR258C TPT1Q12272 230 aaKnown RBP2.81□□□□□ -1.96
SHG1YBR258C GPM3Q12326 303 aa2.81□□□□□ -1.96
SHG1YBR258C HSP82P02829 709 aaKnown RBP2.8□□□□□ -1.96
SHG1YBR258C NAM9P27929 486 aa2.8□□□□□ -1.96
SHG1YBR258C PAD1P33751 242 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
SHG1YBR258C HEL1P36113 551 aa2.8□□□□□ -1.96
SHG1YBR258C NDT80P38830 627 aa2.8□□□□□ -1.96
SHG1YBR258C JLP2P40206 208 aa2.8□□□□□ -1.96
SHG1YBR258C SIM1P40472 476 aa2.8□□□□□ -1.96
SHG1YBR258C CHS6P40955 746 aa2.8□□□□□ -1.96
SHG1YBR258C MTM1P53320 366 aa2.8□□□□□ -1.96
SHG1YBR258C NRM1P53718 249 aa2.8□□□□□ -1.96
SHG1YBR258C OAZ1Q02803 292 aa2.8□□□□□ -1.96
SHG1YBR258C SUE1Q06524 206 aa2.8□□□□□ -1.96
SHG1YBR258C MRPL35Q06678 367 aa2.8□□□□□ -1.96
SHG1YBR258C RAX1Q08760 435 aa2.8□□□□□ -1.96
SHG1YBR258C SPE3Q12074 293 aaKnown RBP2.8□□□□□ -1.96
SHG1YBR258C TRP1P00912 224 aa2.79□□□□□ -1.96
SHG1YBR258C CYC3P06182 269 aa2.79□□□□□ -1.96
SHG1YBR258C ISY1P21374 235 aaPredicted RBP2.79□□□□□ -1.96
SHG1YBR258C DEG1P31115 442 aaKnown RBP2.79□□□□□ -1.96
SHG1YBR258C PUP2P32379 260 aa2.79□□□□□ -1.96
SHG1YBR258C MUD1P32605 298 aaKnown RBP2.79□□□□□ -1.96
SHG1YBR258C YOX1P34161 385 aa2.79□□□□□ -1.96
SHG1YBR258C RRP1P35178 278 aaPredicted RBP2.79□□□□□ -1.96
SHG1YBR258C SRX1P36077 127 aa2.79□□□□□ -1.96
SHG1YBR258C FAD1P38913 306 aa2.79□□□□□ -1.96
SHG1YBR258C RHO5P53879 331 aaKnown RBP2.79□□□□□ -1.96
SHG1YBR258C SUR7P54003 302 aa2.79□□□□□ -1.96
SHG1YBR258C MMT1Q03218 510 aa2.79□□□□□ -1.96
SHG1YBR258C PRP3Q03338 469 aaPredicted RBP2.79□□□□□ -1.96
SHG1YBR258C DCI1Q08558 271 aa2.79□□□□□ -1.96
SHG1YBR258C RPN5Q12250 445 aaKnown RBP2.79□□□□□ -1.96
SHG1YBR258C RPL1AP0CX43 217 aaKnown RBP2.78□□□□□ -1.96
SHG1YBR258C RPL1BP0CX44 217 aaKnown RBP2.78□□□□□ -1.96
SHG1YBR258C MAS1P10507 462 aa2.78□□□□□ -1.96
SHG1YBR258C MSG5P38590 489 aa2.78□□□□□ -1.96
SHG1YBR258C STP2P38704 541 aa2.78□□□□□ -1.96
SHG1YBR258C WWM1P43582 211 aaKnown RBP2.78□□□□□ -1.96
SHG1YBR258C NCA3P46955 337 aa2.78□□□□□ -1.96
SHG1YBR258C BRO1P48582 844 aa2.78□□□□□ -1.96
SHG1YBR258C PHB2P50085 310 aa2.78□□□□□ -1.96
SHG1YBR258C RRP46P53256 223 aaPredicted RBP2.78□□□□□ -1.96
SHG1YBR258C STD1Q02794 444 aa2.78□□□□□ -1.96
SHG1YBR258C NOP6Q07623 225 aaKnown RBP2.78□□□□□ -1.96
SHG1YBR258C PLP2Q12017 286 aa2.78□□□□□ -1.96
SHG1YBR258C CEX1Q12453 761 aa2.78□□□□□ -1.96
SHG1YBR258C NFT1P0CE68 1218 aa2.77□□□□□ -1.97
SHG1YBR258C ALG1P16661 449 aa2.77□□□□□ -1.97
SHG1YBR258C PHA2P32452 334 aa2.77□□□□□ -1.97
SHG1YBR258C CYS4P32582 507 aaKnown RBP2.77□□□□□ -1.97
SHG1YBR258C BUD2P33314 1104 aa2.77□□□□□ -1.97
SHG1YBR258C INM1P38710 295 aa2.77□□□□□ -1.97
SHG1YBR258C WSC4P38739 605 aa2.77□□□□□ -1.97
SHG1YBR258C GPI16P38875 610 aa2.77□□□□□ -1.97
SHG1YBR258C PTH1P38876 190 aaKnown RBP2.77□□□□□ -1.97
SHG1YBR258C LCB2P40970 561 aa2.77□□□□□ -1.97
SHG1YBR258C YJL055WP47044 245 aa2.77□□□□□ -1.97
SHG1YBR258C YNL134CP53912 376 aaKnown RBP2.77□□□□□ -1.97
SHG1YBR258C RPS8AP0CX39 200 aaKnown RBP2.76□□□□□ -1.97
SHG1YBR258C RPS8BP0CX40 200 aaKnown RBP2.76□□□□□ -1.97
SHG1YBR258C PET123P17558 318 aa2.76□□□□□ -1.97
SHG1YBR258C YCL068CP25593 260 aa2.76□□□□□ -1.97
SHG1YBR258C RIM1P32445 135 aaKnown RBP2.76□□□□□ -1.97
SHG1YBR258C SPR1P32603 445 aa2.76□□□□□ -1.97
SHG1YBR258C MDL1P33310 695 aa2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms