RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 LINC01553A4QN01 128 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 FAM86C2PA6NEL3 165 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 GCOM1H8Y6P7 765 aaPredicted RBP12.08□□□□□ -0.48
COL4A1-205ENST00000615732 CTSHP09668 335 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 POLR2MP0CAP2 368 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 HOXD8P13378 290 aaPredicted RBP12.08□□□□□ -0.48
COL4A1-205ENST00000615732 CCND2P30279 289 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 THPOP40225 353 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 GHRHRQ02643 423 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 PTK7Q13308 1070 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 STX1AQ16623 288 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 TYW1BQ6NUM6 668 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 SHC4Q6S5L8 630 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 TRIM50Q86XT4 487 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 ZNF579Q8NAF0 562 aaKnown RBP12.08□□□□□ -0.48
COL4A1-205ENST00000615732 RASGRP4Q8TDF6 673 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 CCDC34Q96HJ3 373 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 TIGD1Q96MW7 591 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 MAF1Q9H063 256 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 ZMYND12Q9H0C1 365 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 SUGCTQ9HAC7 445 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 HOOK1Q9UJC3 728 aaKnown RBP12.08□□□□□ -0.48
COL4A1-205ENST00000615732 KCNH3Q9ULD8 1083 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 PCDHA6Q9UN73 950 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 TELO2Q9Y4R8 837 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 PCDHA8Q9Y5H6 950 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 BRWD1Q9NSI6 2320 aa12.08□□□□□ -0.48
COL4A1-205ENST00000615732 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.07□□□□□ -0.48
COL4A1-205ENST00000615732 GJB5O95377 273 aa12.07□□□□□ -0.48
COL4A1-205ENST00000615732 CAVIN2O95810 425 aa12.07□□□□□ -0.48
COL4A1-205ENST00000615732 LGALS2P05162 132 aa12.07□□□□□ -0.48
COL4A1-205ENST00000615732 MCM7P33993 719 aa12.07□□□□□ -0.48
COL4A1-205ENST00000615732 ERVK-21P61565 698 aa12.07□□□□□ -0.48
COL4A1-205ENST00000615732 SP4Q02446 784 aa12.07□□□□□ -0.48
COL4A1-205ENST00000615732 NONOQ15233 471 aaKnown RBP eCLIP12.07□□□□□ -0.48
COL4A1-205ENST00000615732 ANO6Q4KMQ2 910 aa12.07□□□□□ -0.48
COL4A1-205ENST00000615732 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.07□□□□□ -0.48
COL4A1-205ENST00000615732 VSIG10LQ86VR7 867 aa12.07□□□□□ -0.48
COL4A1-205ENST00000615732 MYOCDQ8IZQ8 938 aa12.07□□□□□ -0.48
COL4A1-205ENST00000615732 REXO1Q8N1G1 1221 aaKnown RBP12.07□□□□□ -0.48
COL4A1-205ENST00000615732 FAM200AQ8TCP9 573 aa12.07□□□□□ -0.48
COL4A1-205ENST00000615732 MLXIPQ9HAP2 919 aa12.07□□□□□ -0.48
COL4A1-205ENST00000615732 ANO10Q9NW15 660 aa12.07□□□□□ -0.48
COL4A1-205ENST00000615732 LMCD1Q9NZU5 365 aa12.07□□□□□ -0.48
COL4A1-205ENST00000615732 HPSEQ9Y251 543 aa12.07□□□□□ -0.48
COL4A1-205ENST00000615732 ARIH1Q9Y4X5 557 aaPredicted RBP12.07□□□□□ -0.48
COL4A1-205ENST00000615732 FAM237AA0A1B0GTK4 181 aa12.06□□□□□ -0.48
COL4A1-205ENST00000615732 ABHD14A-ACY1A0A1B0GW23 586 aa12.06□□□□□ -0.48
COL4A1-205ENST00000615732 M0R2N6 131 aa12.06□□□□□ -0.48
COL4A1-205ENST00000615732 NOP56O00567 594 aaKnown RBP12.06□□□□□ -0.48
COL4A1-205ENST00000615732 GPR37L1O60883 481 aa12.06□□□□□ -0.48
COL4A1-205ENST00000615732 PARNO95453 639 aaKnown RBP12.06□□□□□ -0.48
COL4A1-205ENST00000615732 SMIM10L2AP0DMW4 78 aa12.06□□□□□ -0.48
COL4A1-205ENST00000615732 SMIM10L2BP0DMW5 78 aa12.06□□□□□ -0.48
COL4A1-205ENST00000615732 MRPS9P82933 396 aaKnown RBP12.06□□□□□ -0.48
COL4A1-205ENST00000615732 ATP2C1P98194 919 aaPredicted RBP12.06□□□□□ -0.48
COL4A1-205ENST00000615732 PTGDRQ13258 359 aa12.06□□□□□ -0.48
COL4A1-205ENST00000615732 SEMA3FQ13275 785 aa12.06□□□□□ -0.48
COL4A1-205ENST00000615732 INF2Q27J81 1249 aa12.06□□□□□ -0.48
COL4A1-205ENST00000615732 SERINC5Q86VE9 423 aa12.06□□□□□ -0.48
COL4A1-205ENST00000615732 CNNM3Q8NE01 707 aa12.06□□□□□ -0.48
COL4A1-205ENST00000615732 TRIM44Q96DX7 344 aaPredicted RBP12.06□□□□□ -0.48
COL4A1-205ENST00000615732 TGS1Q96RS0 853 aaKnown RBP12.06□□□□□ -0.48
COL4A1-205ENST00000615732 RAD9AQ99638 391 aa12.06□□□□□ -0.48
COL4A1-205ENST00000615732 C16orf70Q9BSU1 422 aa12.06□□□□□ -0.48
COL4A1-205ENST00000615732 OSBPL7Q9BZF2 842 aa12.06□□□□□ -0.48
COL4A1-205ENST00000615732 CSRNP2Q9H175 543 aa12.06□□□□□ -0.48
COL4A1-205ENST00000615732 GLT8D2Q9H1C3 349 aa12.06□□□□□ -0.48
COL4A1-205ENST00000615732 UBE2ZQ9H832 354 aaPredicted RBP12.06□□□□□ -0.48
COL4A1-205ENST00000615732 MICAL3Q7RTP6 2002 aa12.05□□□□□ -0.48
COL4A1-205ENST00000615732 C17orf102A2RUQ5 167 aa12.05□□□□□ -0.48
COL4A1-205ENST00000615732 TREHO43280 583 aa12.05□□□□□ -0.48
COL4A1-205ENST00000615732 PPFIA4O75335 1185 aa12.05□□□□□ -0.48
COL4A1-205ENST00000615732 LGR5O75473 907 aa12.05□□□□□ -0.48
COL4A1-205ENST00000615732 TXLNAP40222 546 aa12.05□□□□□ -0.48
COL4A1-205ENST00000615732 MKRN4PQ13434 485 aaPredicted RBP12.05□□□□□ -0.48
COL4A1-205ENST00000615732 IKBKEQ14164 716 aa12.05□□□□□ -0.48
COL4A1-205ENST00000615732 SPECC1Q5M775 1068 aa12.05□□□□□ -0.48
COL4A1-205ENST00000615732 UTP14CQ5TAP6 766 aaKnown RBP12.05□□□□□ -0.48
COL4A1-205ENST00000615732 JAKMIP3Q5VZ66 844 aa12.05□□□□□ -0.48
COL4A1-205ENST00000615732 CYFIP1Q7L576 1253 aa12.05□□□□□ -0.48
COL4A1-205ENST00000615732 NEK8Q86SG6 692 aa12.05□□□□□ -0.48
COL4A1-205ENST00000615732 DBF4BQ8NFT6 615 aa12.05□□□□□ -0.48
COL4A1-205ENST00000615732 CUL5Q93034 780 aa12.05□□□□□ -0.48
COL4A1-205ENST00000615732 ATP6V0A1Q93050 837 aa12.05□□□□□ -0.48
COL4A1-205ENST00000615732 C17orf80Q9BSJ5 609 aa12.05□□□□□ -0.48
COL4A1-205ENST00000615732 FRMPD4Q14CM0 1322 aa12.05□□□□□ -0.48
COL4A1-205ENST00000615732 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.04□□□□□ -0.48
COL4A1-205ENST00000615732 VWA3AA6NCI4 1184 aa12.04□□□□□ -0.48
COL4A1-205ENST00000615732 RSPH10B2B2RC85 870 aa12.04□□□□□ -0.48
COL4A1-205ENST00000615732 PI4K2BG5E9Z4 385 aa12.04□□□□□ -0.48
COL4A1-205ENST00000615732 H3BRB1 525 aa12.04□□□□□ -0.48
COL4A1-205ENST00000615732 ADAMTS3O15072 1205 aa12.04□□□□□ -0.48
COL4A1-205ENST00000615732 EFCAB14O75071 495 aa12.04□□□□□ -0.48
COL4A1-205ENST00000615732 RSPH10BP0C881 870 aa12.04□□□□□ -0.48
COL4A1-205ENST00000615732 GRIN1Q05586 938 aa12.04□□□□□ -0.48
COL4A1-205ENST00000615732 ORC2Q13416 577 aaPredicted RBP12.04□□□□□ -0.48
COL4A1-205ENST00000615732 GNPTABQ3T906 1256 aa12.04□□□□□ -0.48
COL4A1-205ENST00000615732 LEXMQ3ZCV2 418 aa12.04□□□□□ -0.48
COL4A1-205ENST00000615732 ARL6IP4Q66PJ3 421 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms