RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 FOXB1Q99853 325 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 SOX7Q9BT81 388 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 MYL10Q9BUA6 226 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 HAPLN2Q9GZV7 340 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 POFUT1Q9H488 388 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 INCENPQ9NQS7 918 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 DLL4Q9NR61 685 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 TOMM22Q9NS69 142 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 GALNT8Q9NY28 637 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 SLC5A4Q9NY91 659 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 ZFP69BQ9UJL9 534 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 TRHDEQ9UKU6 1024 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 PCDHGA9Q9Y5G4 932 aaKnown RBP2.3□□□□□ -2.04
SNORA28-201ENST00000606769 PCDHGA8Q9Y5G5 932 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 PCDHGA7Q9Y5G6 932 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 PCDHGA6Q9Y5G7 932 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 PCDHGA3Q9Y5H0 932 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 PCDHGA2Q9Y5H1 932 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 TNKSO95271 1327 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 hCG_2014768A0A024R1R8 64 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.29□□□□□ -2.04
SNORA28-201ENST00000606769 PRSS38A1L453 326 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 SH3D21A4FU49 640 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 HIP1RO75146 1068 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 RAB11FIP3O75154 756 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 MAFO75444 373 aaPredicted RBP2.29□□□□□ -2.04
SNORA28-201ENST00000606769 PFKMP08237 780 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 PDGFRBP09619 1106 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 CLEC2LP0C7M8 214 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 PFKLP17858 780 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 IARSP41252 1262 aaKnown RBP2.29□□□□□ -2.04
SNORA28-201ENST00000606769 ECE1P42892 770 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 GLRBP48167 497 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 GUCY2FP51841 1108 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 SESN3P58005 492 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 CD83Q01151 205 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 SLC6A3Q01959 620 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 NOLC1Q14978 699 aaKnown RBP eCLIP2.29□□□□□ -2.04not detected■■■□□ 15.5
SNORA28-201ENST00000606769 ODF1Q14990 250 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 ZNF174Q15697 407 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 KCNA10Q16322 511 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 DDB1Q16531 1140 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 VMACQ2NL98 169 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 CT47A1Q5JQC4 288 aaPredicted RBP2.29□□□□□ -2.04
SNORA28-201ENST00000606769 PITRM1Q5JRX3 1037 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 OLFML2BQ68BL8 750 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 VASNQ6EMK4 673 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 CNKSR3Q6P9H4 555 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 LARP4Q71RC2 724 aaKnown RBP eCLIP2.29□□□□□ -2.04
SNORA28-201ENST00000606769 KCNK18Q7Z418 384 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 BHLHE22Q8NFJ8 381 aaPredicted RBP2.29□□□□□ -2.04
SNORA28-201ENST00000606769 NUDT10Q8NFP7 164 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 ATL2Q8NHH9 583 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 ZCRB1Q8TBF4 217 aaKnown RBP2.29□□□□□ -2.04
SNORA28-201ENST00000606769 ERCC4Q92889 916 aaPredicted RBP2.29□□□□□ -2.04
SNORA28-201ENST00000606769 ZBTB8AQ96BR9 441 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 NUDT11Q96G61 164 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 YTHDC1Q96MU7 727 aaKnown RBP2.29□□□□□ -2.04
SNORA28-201ENST00000606769 PWWP2AQ96N64 755 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 TMEM209Q96SK2 561 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 SPATA25Q9BR10 227 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 FDXACB1Q9BRP7 624 aaPredicted RBP2.29□□□□□ -2.04
SNORA28-201ENST00000606769 TACO1Q9BSH4 297 aaKnown RBP2.29□□□□□ -2.04
SNORA28-201ENST00000606769 BTBD2Q9BX70 525 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 PITHD1Q9GZP4 211 aaPredicted RBP2.29□□□□□ -2.04
SNORA28-201ENST00000606769 OR10A5Q9H207 317 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 PCIF1Q9H4Z3 704 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 TYW1Q9NV66 732 aaKnown RBP2.29□□□□□ -2.04
SNORA28-201ENST00000606769 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.29□□□□□ -2.04
SNORA28-201ENST00000606769 C14orf119Q9NWQ9 140 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 ARHGAP20Q9P2F6 1191 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 MSRAQ9UJ68 235 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 MCM8Q9UJA3 840 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 DENND2AQ9ULE3 1009 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 KCTD3Q9Y597 815 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 NUB1Q9Y5A7 615 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 IRAK3Q9Y616 596 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 PMF1-BGLAPU3KQ54 211 aa2.29□□□□□ -2.04
SNORA28-201ENST00000606769 A0A0A6YYJ9 748 aa2.28□□□□□ -2.04
SNORA28-201ENST00000606769 UBA6A0AVT1 1052 aaPredicted RBP2.28□□□□□ -2.04
SNORA28-201ENST00000606769 NPIPB6E9PJ23 425 aa2.28□□□□□ -2.04
SNORA28-201ENST00000606769 KDM1AO60341 852 aa2.28□□□□□ -2.04
SNORA28-201ENST00000606769 PRPF6O94906 941 aaKnown RBP2.28□□□□□ -2.04
SNORA28-201ENST00000606769 CD40P25942 277 aa2.28□□□□□ -2.04
SNORA28-201ENST00000606769 RPL13P26373 211 aaKnown RBP2.28□□□□□ -2.04
SNORA28-201ENST00000606769 CFPP27918 469 aa2.28□□□□□ -2.04
SNORA28-201ENST00000606769 LSP1P33241 339 aa2.28□□□□□ -2.04
SNORA28-201ENST00000606769 IL13P35225 146 aa2.28□□□□□ -2.04
SNORA28-201ENST00000606769 IGBP1P78318 339 aa2.28□□□□□ -2.04
SNORA28-201ENST00000606769 EXOSC10Q01780 885 aaKnown RBP2.28□□□□□ -2.04
SNORA28-201ENST00000606769 MCL1Q07820 350 aa2.28□□□□□ -2.04
SNORA28-201ENST00000606769 TOP3AQ13472 1001 aaPredicted RBP2.28□□□□□ -2.04
SNORA28-201ENST00000606769 PCBP2Q15366 365 aaKnown RBP eCLIP2.28□□□□□ -2.04
SNORA28-201ENST00000606769 ABCB5Q2M3G0 1257 aa2.28□□□□□ -2.04
SNORA28-201ENST00000606769 CT83Q5H943 113 aa2.28□□□□□ -2.04
SNORA28-201ENST00000606769 SYDE2Q5VT97 1194 aa2.28□□□□□ -2.04
SNORA28-201ENST00000606769 TMEM200BQ69YZ2 307 aa2.28□□□□□ -2.04
SNORA28-201ENST00000606769 TMEM132EQ6IEE7 984 aa2.28□□□□□ -2.04
SNORA28-201ENST00000606769 KIAA1841Q6NSI8 718 aa2.28□□□□□ -2.04
SNORA28-201ENST00000606769 LCNL1Q6ZST4 164 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms