RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 ZSCAN10Q96SZ4 725 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-218ENST00000598907 TCF25Q9BQ70 676 aa15.92■□□□□ 0.14
SHKBP1-218ENST00000598907 VAT1LQ9HCJ6 419 aa15.92■□□□□ 0.14
SHKBP1-218ENST00000598907 PDRG1Q9NUG6 133 aa15.92■□□□□ 0.14
SHKBP1-218ENST00000598907 FBXL21Q9UKT6 434 aa15.92■□□□□ 0.14
SHKBP1-218ENST00000598907 FRYLO94915 3013 aa15.92■□□□□ 0.14
SHKBP1-218ENST00000598907 SPTBN2O15020 2390 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 HIDE1A8MVS5 230 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 SH2B2O14492 632 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 FSCN2O14926 492 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 HOXB8P17481 243 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 CCND2P30279 289 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 LIFRP42702 1097 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 EVCP57679 992 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 CCDC178Q5BJE1 867 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 TAF2Q6P1X5 1199 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 Q6ZUG5 572 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 CYFIP1Q7L576 1253 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 IQCA1Q86XH1 822 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 DGKHQ86XP1 1220 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 SIX5Q8N196 739 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 CRIPAKQ8N1N5 446 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 ZBTB10Q96DT7 871 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 NECTIN4Q96NY8 510 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 GPR20Q99678 358 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 ZKSCAN3Q9BRR0 538 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 MAF1Q9H063 256 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 FAM49AQ9H0Q0 323 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 ERVK-5Q9HDB9 667 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 AAASQ9NRG9 546 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 CHD6Q8TD26 2715 aa15.91■□□□□ 0.14
SHKBP1-218ENST00000598907 TBKBP1A7MCY6 615 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 STK25O00506 426 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 OPLAHO14841 1288 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 TGFB3P10600 412 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 HSD17B4P51659 736 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 AK2P54819 239 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 MRPS6P82932 125 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 TMEM62Q0P6H9 643 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 PPFIA1Q13136 1202 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 TPRNQ4KMQ1 711 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 VSIG10LQ86VR7 867 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 ENAHQ8N8S7 591 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 COLGALT1Q8NBJ5 622 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 RUBCNQ92622 972 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 SNX21Q969T3 373 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 RTP3Q9BQQ7 232 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 LRRC2Q9BYS8 371 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 SEMA4AQ9H3S1 761 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 LY9Q9HBG7 655 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 TUBE1Q9UJT0 475 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 NRCAMQ92823 1304 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 CFAP47Q6ZTR5 3102 aa15.9■□□□□ 0.14
SHKBP1-218ENST00000598907 IFIT3O14879 490 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-218ENST00000598907 CD2BP2O95400 341 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-218ENST00000598907 RFX1P22670 979 aa15.89■□□□□ 0.13
SHKBP1-218ENST00000598907 MARK3P27448 753 aa15.89■□□□□ 0.13
SHKBP1-218ENST00000598907 CA8P35219 290 aa15.89■□□□□ 0.13
SHKBP1-218ENST00000598907 IGBP1P78318 339 aa15.89■□□□□ 0.13
SHKBP1-218ENST00000598907 PAK2Q13177 524 aa15.89■□□□□ 0.13
SHKBP1-218ENST00000598907 RARS2Q5T160 578 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-218ENST00000598907 PDE12Q6L8Q7 609 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-218ENST00000598907 SGMS1Q86VZ5 419 aa15.89■□□□□ 0.13
SHKBP1-218ENST00000598907 CASP10Q92851 521 aa15.89■□□□□ 0.13
SHKBP1-218ENST00000598907 UBAC1Q9BSL1 405 aa15.89■□□□□ 0.13
SHKBP1-218ENST00000598907 FTHL17Q9BXU8 183 aa15.89■□□□□ 0.13
SHKBP1-218ENST00000598907 ADAM7Q9H2U9 754 aa15.89■□□□□ 0.13
SHKBP1-218ENST00000598907 SENP2Q9HC62 589 aa15.89■□□□□ 0.13
SHKBP1-218ENST00000598907 DBR1Q9UK59 544 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-218ENST00000598907 RBM19Q9Y4C8 960 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-218ENST00000598907 FNDC1Q4ZHG4 1894 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 OTOGLQ3ZCN5 2332 aa15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 MTHFRP42898 656 aa15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 COL9A2Q14055 689 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 WTAPQ15007 396 aa15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 SART3Q15020 963 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 ANKRD1Q15327 319 aa15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 GRIK4Q16099 956 aa15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 KANK3Q6NY19 840 aa15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 METTL7BQ6UX53 244 aa15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 FCHSD1Q86WN1 690 aa15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 ZDHHC14Q8IZN3 488 aa15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 TMTC2Q8N394 836 aa15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 C12orf76Q8N812 135 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 RASGRP4Q8TDF6 673 aa15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 PADI3Q9ULW8 664 aa15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 HCFC2Q9Y5Z7 792 aa15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 KAT6AQ92794 2004 aa15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 USP24Q9UPU5 2620 aa15.88■□□□□ 0.13
SHKBP1-218ENST00000598907 ERICH2A1L162 156 aa15.87■□□□□ 0.13
SHKBP1-218ENST00000598907 ITIH3Q06033 890 aa15.87■□□□□ 0.13
SHKBP1-218ENST00000598907 TMEM266Q2M3C6 531 aa15.87■□□□□ 0.13
SHKBP1-218ENST00000598907 GNPTABQ3T906 1256 aa15.87■□□□□ 0.13
SHKBP1-218ENST00000598907 SPECC1Q5M775 1068 aa15.87■□□□□ 0.13
SHKBP1-218ENST00000598907 MRPS27Q92552 414 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-218ENST00000598907 BRF1Q92994 677 aa15.87■□□□□ 0.13
SHKBP1-218ENST00000598907 JMJD4Q9H9V9 463 aa15.87■□□□□ 0.13
SHKBP1-218ENST00000598907 TYW1Q9NV66 732 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-218ENST00000598907 BRPF3Q9ULD4 1205 aa15.87■□□□□ 0.13
SHKBP1-218ENST00000598907 PCDHB7Q9Y5E2 793 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms