RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 SUGT1Q9Y2Z0 365 aa14.43□□□□□ -0.1
VRK3-209ENST00000594948 RTCBQ9Y3I0 505 aaKnown RBP14.43□□□□□ -0.1
VRK3-209ENST00000594948 CHUKO15111 745 aa14.43□□□□□ -0.1
VRK3-209ENST00000594948 PPFIA2O75334 1257 aa14.43□□□□□ -0.1
VRK3-209ENST00000594948 RASSF9O75901 435 aa14.43□□□□□ -0.1
VRK3-209ENST00000594948 RPA1P27694 616 aa14.43□□□□□ -0.1
VRK3-209ENST00000594948 POU5F1Q01860 360 aaKnown RBP14.43□□□□□ -0.1
VRK3-209ENST00000594948 LACTB2Q53H82 288 aaPredicted RBP14.43□□□□□ -0.1
VRK3-209ENST00000594948 RNF187Q5TA31 235 aaPredicted RBP14.43□□□□□ -0.1
VRK3-209ENST00000594948 DPP8Q6V1X1 898 aaPredicted RBP14.43□□□□□ -0.1
VRK3-209ENST00000594948 CCDC121Q6ZUS5 278 aa14.43□□□□□ -0.1
VRK3-209ENST00000594948 SLC30A5Q8TAD4 765 aa14.43□□□□□ -0.1
VRK3-209ENST00000594948 CERKQ8TCT0 537 aa14.43□□□□□ -0.1
VRK3-209ENST00000594948 NAP1L3Q99457 506 aaPredicted RBP14.43□□□□□ -0.1
VRK3-209ENST00000594948 TXLNGYQ9BZA5 131 aa14.43□□□□□ -0.1
VRK3-209ENST00000594948 DDX47Q9H0S4 455 aaKnown RBP14.43□□□□□ -0.1
VRK3-209ENST00000594948 AMFRQ9UKV5 643 aa14.43□□□□□ -0.1
VRK3-209ENST00000594948 UTP11Q9Y3A2 253 aaKnown RBP14.43□□□□□ -0.1
VRK3-209ENST00000594948 FAM187AA6NFU0 413 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 TMCO5BA8MYB1 307 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 F8VZ95 297 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 DDX3XO00571 662 aaKnown RBP eCLIP14.42□□□□□ -0.13e-12■■□□□ 11.9
VRK3-209ENST00000594948 GNPATO15228 680 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 UFL1O94874 794 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 TMEM253P0C7T8 217 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 GHRP10912 638 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 LMNB1P20700 586 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 HPDP32754 393 aaPredicted RBP14.42□□□□□ -0.1
VRK3-209ENST00000594948 STAT1P42224 750 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 SPIRE1Q08AE8 756 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 IFT88Q13099 833 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 ENOX2Q16206 610 aaKnown RBP14.42□□□□□ -0.1
VRK3-209ENST00000594948 Q4G0T1 1027 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 MFSD14BQ5SR56 506 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 CCDC50Q8IVM0 306 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 CCDC13Q8IYE1 715 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 CCDC24Q8N4L8 307 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 UBLCP1Q8WVY7 318 aaPredicted RBP14.42□□□□□ -0.1
VRK3-209ENST00000594948 CRYGNQ8WXF5 182 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 TLCD1Q96CP7 247 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 AP1M1Q9BXS5 423 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 ANO3Q9BYT9 981 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 KANSL2Q9H9L4 492 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 PPANQ9NQ55 473 aaKnown RBP14.42□□□□□ -0.1
VRK3-209ENST00000594948 DDX20Q9UHI6 824 aaKnown RBP14.42□□□□□ -0.1
VRK3-209ENST00000594948 GGA1Q9UJY5 639 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 DNM3Q9UQ16 869 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 DAGLAQ9Y4D2 1042 aa14.42□□□□□ -0.1
VRK3-209ENST00000594948 USP17L10C9JJH3 530 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 TULP1O00294 542 aaPredicted RBP14.41□□□□□ -0.1
VRK3-209ENST00000594948 DAPK3O43293 454 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 TRIM37O94972 964 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 NR3C1P04150 777 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 HOXD13P35453 343 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 CASP5P51878 434 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 CACNB1Q02641 598 aaPredicted RBP14.41□□□□□ -0.1
VRK3-209ENST00000594948 CROCCP2Q86T23 111 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 HOOK3Q86VS8 718 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 SFR1Q86XK3 245 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 DDX42Q86XP3 938 aaKnown RBP eCLIP14.41□□□□□ -0.1
VRK3-209ENST00000594948 PLCD3Q8N3E9 789 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 ETNPPLQ8TBG4 499 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 TATDN2Q93075 761 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 SLC35C1Q96A29 364 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.41□□□□□ -0.1
VRK3-209ENST00000594948 ASTN1O14525 1302 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 KDM4FA0A1W2PPD8 638 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 EIF3DO15371 548 aaKnown RBP eCLIP14.41□□□□□ -0.1
VRK3-209ENST00000594948 AKAP3O75969 853 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 GAP43P17677 238 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 DRG2P55039 364 aaKnown RBP14.41□□□□□ -0.1
VRK3-209ENST00000594948 PTENP60484 403 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 PPATQ06203 517 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 TTBK2Q6IQ55 1244 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 DAAM2Q86T65 1068 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 CATSPER3Q86XQ3 398 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 CACNA2D3Q8IZS8 1091 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 MAGEC3Q8TD91 643 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 RFFLQ8WZ73 363 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 RAPGEF5Q92565 580 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 ARHGEF1Q92888 912 aaKnown RBP14.41□□□□□ -0.1
VRK3-209ENST00000594948 SEC16BQ96JE7 1060 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 FAM20AQ96MK3 541 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 PSMD1Q99460 953 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 MKNK1Q9BUB5 465 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 CARD9Q9H257 536 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 OLFML3Q9NRN5 406 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 KLC4Q9NSK0 619 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 AMACRQ9UHK6 382 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 SERPINB13Q9UIV8 391 aa14.41□□□□□ -0.1
VRK3-209ENST00000594948 UBE4BO95155 1302 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 POTEFA5A3E0 1075 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 NUDT17P0C025 328 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 CCDC172P0C7W6 258 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 POTEIP0CG38 1075 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 GBP1P32455 592 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 GALCP54803 685 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 DHX34Q14147 1143 aaKnown RBP14.4□□□□□ -0.1
VRK3-209ENST00000594948 SLC15A2Q16348 729 aa14.4□□□□□ -0.1
VRK3-209ENST00000594948 CRY2Q49AN0 593 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms