RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 NR2F2P24468 414 aa23.55■■□□□ 1.36
SPSB3-208ENST00000566339 PTGER2P43116 358 aa23.55■■□□□ 1.36
SPSB3-208ENST00000566339 SLC12A3P55017 1021 aa23.55■■□□□ 1.36
SPSB3-208ENST00000566339 UAP1Q16222 522 aaPredicted RBP23.55■■□□□ 1.36
SPSB3-208ENST00000566339 KNOP1Q1ED39 458 aaKnown RBP23.55■■□□□ 1.36
SPSB3-208ENST00000566339 ERMNQ8TAM6 284 aa23.55■■□□□ 1.36
SPSB3-208ENST00000566339 NAP1L3Q99457 506 aaPredicted RBP23.55■■□□□ 1.36
SPSB3-208ENST00000566339 RAB17Q9H0T7 212 aa23.55■■□□□ 1.36
SPSB3-208ENST00000566339 DHX36Q9H2U1 1008 aaKnown RBP23.55■■□□□ 1.36
SPSB3-208ENST00000566339 CD209Q9NNX6 404 aa23.55■■□□□ 1.36
SPSB3-208ENST00000566339 NOC2LQ9Y3T9 749 aaKnown RBP23.55■■□□□ 1.36
SPSB3-208ENST00000566339 UBR3Q6ZT12 1888 aa23.55■■□□□ 1.36
SPSB3-208ENST00000566339 E7EVH7 732 aa23.55■■□□□ 1.36
SPSB3-208ENST00000566339 ZBTB5O15062 677 aa23.55■■□□□ 1.36
SPSB3-208ENST00000566339 JAM2P57087 298 aa23.55■■□□□ 1.36
SPSB3-208ENST00000566339 LACTB2Q53H82 288 aaPredicted RBP23.55■■□□□ 1.36
SPSB3-208ENST00000566339 CCDC121Q6ZUS5 278 aa23.55■■□□□ 1.36
SPSB3-208ENST00000566339 PEX26Q7Z412 305 aa23.55■■□□□ 1.36
SPSB3-208ENST00000566339 METTL13Q8N6R0 699 aa23.55■■□□□ 1.36
SPSB3-208ENST00000566339 MAGEC3Q8TD91 643 aa23.55■■□□□ 1.36
SPSB3-208ENST00000566339 KIAA1024Q9UPX6 916 aa23.55■■□□□ 1.36
SPSB3-208ENST00000566339 SUGT1Q9Y2Z0 365 aa23.55■■□□□ 1.36
SPSB3-208ENST00000566339 MYH7BA7E2Y1 1941 aa23.54■■□□□ 1.36
SPSB3-208ENST00000566339 GOLGB1Q14789 3259 aaKnown RBP23.54■■□□□ 1.36
SPSB3-208ENST00000566339 GHRP10912 638 aa23.54■■□□□ 1.36
SPSB3-208ENST00000566339 XRCC5P13010 732 aaKnown RBP23.54■■□□□ 1.36
SPSB3-208ENST00000566339 PON1P27169 355 aa23.54■■□□□ 1.36
SPSB3-208ENST00000566339 HDLBPQ00341 1268 aaKnown RBP23.54■■□□□ 1.36
SPSB3-208ENST00000566339 AP3B2Q13367 1082 aa23.54■■□□□ 1.36
SPSB3-208ENST00000566339 HES6Q96HZ4 224 aa23.54■■□□□ 1.36
SPSB3-208ENST00000566339 QSER1Q2KHR3 1735 aa23.54■■□□□ 1.36
SPSB3-208ENST00000566339 NCANO14594 1321 aa23.54■■□□□ 1.36
SPSB3-208ENST00000566339 KRIT1O00522 736 aa23.53■■□□□ 1.36
SPSB3-208ENST00000566339 RASSF9O75901 435 aa23.53■■□□□ 1.36
SPSB3-208ENST00000566339 GBP1P32455 592 aa23.53■■□□□ 1.36
SPSB3-208ENST00000566339 EPHA7Q15375 998 aa23.53■■□□□ 1.36
SPSB3-208ENST00000566339 TEX2Q8IWB9 1127 aa23.53■■□□□ 1.36
SPSB3-208ENST00000566339 NELFCDQ8IXH7 590 aa23.53■■□□□ 1.36
SPSB3-208ENST00000566339 ADGRF4Q8IZF3 695 aa23.53■■□□□ 1.36
SPSB3-208ENST00000566339 PSTPIP2Q9H939 334 aa23.53■■□□□ 1.36
SPSB3-208ENST00000566339 TYW1Q9NV66 732 aaKnown RBP23.53■■□□□ 1.36
SPSB3-208ENST00000566339 PACSIN2Q9UNF0 486 aaPredicted RBP23.53■■□□□ 1.36
SPSB3-208ENST00000566339 UTP11Q9Y3A2 253 aaKnown RBP23.53■■□□□ 1.36
SPSB3-208ENST00000566339 FRMPD2Q68DX3 1309 aaPredicted RBP23.53■■□□□ 1.36
SPSB3-208ENST00000566339 FAM187AA6NFU0 413 aa23.52■■□□□ 1.36
SPSB3-208ENST00000566339 E9PMD0 336 aa23.52■■□□□ 1.36
SPSB3-208ENST00000566339 KRT18P05783 430 aaKnown RBP23.52■■□□□ 1.36
SPSB3-208ENST00000566339 NFIXQ14938 502 aa23.52■■□□□ 1.36
SPSB3-208ENST00000566339 TMC3Q7Z5M5 1100 aa23.52■■□□□ 1.36
SPSB3-208ENST00000566339 SYT2Q8N9I0 419 aaPredicted RBP23.52■■□□□ 1.36
SPSB3-208ENST00000566339 RABEP2Q9H5N1 569 aa23.52■■□□□ 1.36
SPSB3-208ENST00000566339 PPFIA2O75334 1257 aa23.52■■□□□ 1.36
SPSB3-208ENST00000566339 SSBP05455 408 aaKnown RBP eCLIP23.52■■□□□ 1.36
SPSB3-208ENST00000566339 CCDC172P0C7W6 258 aa23.52■■□□□ 1.36
SPSB3-208ENST00000566339 LMNB1P20700 586 aa23.52■■□□□ 1.36
SPSB3-208ENST00000566339 DRG2P55039 364 aaKnown RBP23.52■■□□□ 1.36
SPSB3-208ENST00000566339 IFFO1Q0D2I5 559 aa23.52■■□□□ 1.36
SPSB3-208ENST00000566339 SLC51AQ86UW1 340 aa23.52■■□□□ 1.36
SPSB3-208ENST00000566339 NT5DC3Q86UY8 548 aa23.52■■□□□ 1.36
SPSB3-208ENST00000566339 HOOK3Q86VS8 718 aa23.52■■□□□ 1.36
SPSB3-208ENST00000566339 AMFRQ9UKV5 643 aa23.52■■□□□ 1.36
SPSB3-208ENST00000566339 TMCO5BA8MYB1 307 aa23.51■■□□□ 1.35
SPSB3-208ENST00000566339 MYO1FO00160 1098 aa23.51■■□□□ 1.35
SPSB3-208ENST00000566339 CRY2Q49AN0 593 aa23.51■■□□□ 1.35
SPSB3-208ENST00000566339 COL23A1Q86Y22 540 aaPredicted RBP23.51■■□□□ 1.35
SPSB3-208ENST00000566339 FGFBP2Q9BYJ0 223 aa23.51■■□□□ 1.35
SPSB3-208ENST00000566339 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.51■■□□□ 1.35
SPSB3-208ENST00000566339 HSPA6P17066 643 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 STAT1P42224 750 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 POU5F1Q01860 360 aaKnown RBP23.5■■□□□ 1.35
SPSB3-208ENST00000566339 ARID5AQ03989 594 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 GIT2Q14161 759 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 RNF187Q5TA31 235 aaPredicted RBP23.5■■□□□ 1.35
SPSB3-208ENST00000566339 CCDC13Q8IYE1 715 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 TLCD1Q96CP7 247 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 TXLNGYQ9BZA5 131 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 NUDT17P0C025 328 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 TMEM253P0C7T8 217 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 GAP43P17677 238 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 RPA1P27694 616 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 SEC24CP53992 1094 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 IFT88Q13099 833 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 UBE2SQ16763 222 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 ARSHQ5FYA8 562 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 CACNA2D3Q8IZS8 1091 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 CNBD1Q8NA66 436 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 VTI1AQ96AJ9 217 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 SGIP1Q9BQI5 828 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 MKNK1Q9BUB5 465 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 CARD9Q9H257 536 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 KLC4Q9NSK0 619 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 DNM3Q9UQ16 869 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 ARFGEF1Q9Y6D6 1849 aa23.5■■□□□ 1.35
SPSB3-208ENST00000566339 MYH4Q9Y623 1939 aa23.49■■□□□ 1.35
SPSB3-208ENST00000566339 F8VZ95 297 aa23.49■■□□□ 1.35
SPSB3-208ENST00000566339 PPP1R11O60927 126 aaPredicted RBP23.49■■□□□ 1.35
SPSB3-208ENST00000566339 SLC9A1P19634 815 aa23.49■■□□□ 1.35
SPSB3-208ENST00000566339 HMGB2P26583 209 aaKnown RBP23.49■■□□□ 1.35
SPSB3-208ENST00000566339 DNA2P51530 1060 aa23.49■■□□□ 1.35
SPSB3-208ENST00000566339 GPSM2P81274 684 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms