RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 CD300LDQ6UXZ3 194 aa6.19□□□□□ -1.42
PRPF39-212ENST00000557477 NME9Q86XW9 330 aa6.19□□□□□ -1.42
PRPF39-212ENST00000557477 FAXDC2Q96IV6 333 aa6.19□□□□□ -1.42
PRPF39-212ENST00000557477 DIRC2Q96SL1 478 aa6.19□□□□□ -1.42
PRPF39-212ENST00000557477 CCM2LQ9NUG4 571 aaPredicted RBP6.19□□□□□ -1.42
PRPF39-212ENST00000557477 ARHGAP28Q9P2N2 729 aa6.19□□□□□ -1.42
PRPF39-212ENST00000557477 PPP2R3BQ9Y5P8 575 aa6.19□□□□□ -1.42
PRPF39-212ENST00000557477 MYOCOSA0A1B0GUC4 107 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 NFIBO00712 420 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 TSPAN6O43657 245 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 PCDHGA12O60330 932 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 RBP3P10745 1247 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 ATF2P15336 505 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 MANFP55145 182 aaKnown RBP6.18□□□□□ -1.42
PRPF39-212ENST00000557477 NKX3-2P78367 333 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 PFKPQ01813 784 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 SLC6A3Q01959 620 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 CT83Q5H943 113 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 TTC38Q5R3I4 469 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 LRSAM1Q6UWE0 723 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 ESPNLQ6ZVH7 1005 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 PHYKPLQ8IUZ5 450 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 CPA5Q8WXQ8 436 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 DDX11Q96FC9 970 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 TUBGCP5Q96RT8 1024 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 MYL10Q9BUA6 226 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 AMNQ9BXJ7 453 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 ANO3Q9BYT9 981 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 SLC13A1Q9BZW2 595 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 CDH19Q9H159 772 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 NSUN3Q9H649 340 aaKnown RBP6.18□□□□□ -1.42
PRPF39-212ENST00000557477 CNTD2Q9H8S5 307 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.18□□□□□ -1.42
PRPF39-212ENST00000557477 PCDHGA9Q9Y5G4 932 aaKnown RBP6.18□□□□□ -1.42
PRPF39-212ENST00000557477 PCDHGA8Q9Y5G5 932 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 PCDHGA7Q9Y5G6 932 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 PCDHGA6Q9Y5G7 932 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 PCDHGA3Q9Y5H0 932 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 PCDHGA2Q9Y5H1 932 aa6.18□□□□□ -1.42
PRPF39-212ENST00000557477 TRIM75PA6NK02 468 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 ABLIM3O94929 683 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 APOL3O95236 402 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 RGS3P49796 1198 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 CDR1P51861 262 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 ALDH6A1Q02252 535 aaKnown RBP6.17□□□□□ -1.42
PRPF39-212ENST00000557477 CACNB2Q08289 660 aaPredicted RBP6.17□□□□□ -1.42
PRPF39-212ENST00000557477 ODF1Q14990 250 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 FSCN1Q16658 493 aaKnown RBP6.17□□□□□ -1.42
PRPF39-212ENST00000557477 RGL3Q3MIN7 710 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 PHF19Q5T6S3 580 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 PRAMEF9Q5VWM5 478 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 VASNQ6EMK4 673 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 SLFN12LQ6IEE8 588 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 CCDC62Q6P9F0 684 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 UNQ6494/PRO21346Q6UXR6 183 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 PRR23BQ6ZRT6 265 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 ZC3H18Q86VM9 953 aaKnown RBP6.17□□□□□ -1.42
PRPF39-212ENST00000557477 LDHDQ86WU2 507 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 MAML3Q96JK9 1138 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 ACAP3Q96P50 834 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 ORAI2Q96SN7 254 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 FOXB1Q99853 325 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 RHOBTB2Q9BYZ6 727 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 PRDM12Q9H4Q4 367 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 MKS1Q9NXB0 559 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 MBD1Q9UIS9 605 aaPredicted RBP6.17□□□□□ -1.42
PRPF39-212ENST00000557477 LUC7L2Q9Y383 392 aaKnown RBP6.17□□□□□ -1.42
PRPF39-212ENST00000557477 PCDHA5Q9Y5H7 936 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 IRS2Q9Y4H2 1338 aa6.17□□□□□ -1.42
PRPF39-212ENST00000557477 PRSS38A1L453 326 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 PRPF6O94906 941 aaKnown RBP6.16□□□□□ -1.42
PRPF39-212ENST00000557477 CFBP00751 764 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 ENO2P09104 434 aaPredicted RBP6.16□□□□□ -1.42
PRPF39-212ENST00000557477 NCAM1P13591 858 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 ENPP1P22413 925 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 SRSF2Q01130 221 aaKnown RBP6.16□□□□□ -1.42
PRPF39-212ENST00000557477 CLUL1Q15846 466 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 SKIDA1Q1XH10 827 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 PITRM1Q5JRX3 1037 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 PNMA8AQ86V59 439 aaPredicted RBP6.16□□□□□ -1.42
PRPF39-212ENST00000557477 DTX3Q8N9I9 347 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 SMARCC2Q8TAQ2 1214 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 FERMT2Q96AC1 680 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 E2F7Q96AV8 911 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 EAF2Q96CJ1 260 aaPredicted RBP6.16□□□□□ -1.42
PRPF39-212ENST00000557477 MCOLN1Q9GZU1 580 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 RNF38Q9H0F5 515 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 QRSL1Q9H0R6 528 aaKnown RBP6.16□□□□□ -1.42
PRPF39-212ENST00000557477 EPB41L4BQ9H329 900 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 DCP1AQ9NPI6 582 aaPredicted RBP6.16□□□□□ -1.42
PRPF39-212ENST00000557477 INCENPQ9NQS7 918 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 SIRT5Q9NXA8 310 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 IP6K2Q9UHH9 426 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 ZNF180Q9UJW8 692 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 EDARQ9UNE0 448 aa6.16□□□□□ -1.42
PRPF39-212ENST00000557477 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.16□□□□□ -1.42
PRPF39-212ENST00000557477 E2F8A0AVK6 867 aa6.15□□□□□ -1.42
PRPF39-212ENST00000557477 XPOTO43592 962 aaKnown RBP6.15□□□□□ -1.42
PRPF39-212ENST00000557477 SNUPNO95149 360 aaKnown RBP6.15□□□□□ -1.42
PRPF39-212ENST00000557477 LPLP06858 475 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms