RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 ZNF589Q86UQ0 364 aaPredicted RBP5.87□□□□□ -1.47
HTT-202ENST00000502820 C1orf210Q8IVY1 113 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 TEX2Q8IWB9 1127 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 PLEKHM2Q8IWE5 1019 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 CMTR2Q8IYT2 770 aaKnown RBP5.87□□□□□ -1.47
HTT-202ENST00000502820 ZNF710Q8N1W2 664 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 DNERQ8NFT8 737 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 PPTC7Q8NI37 304 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 RSAD2Q8WXG1 361 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 CLEC4DQ8WXI8 215 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 TBC1D5Q92609 795 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 CASP10Q92851 521 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 FAM227BQ96M60 508 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 CDCA3Q99618 268 aaPredicted RBP5.87□□□□□ -1.47
HTT-202ENST00000502820 RTKNQ9BST9 563 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 FAM49AQ9H0Q0 323 aaPredicted RBP5.87□□□□□ -1.47
HTT-202ENST00000502820 TUT1Q9H6E5 874 aaKnown RBP5.87□□□□□ -1.47
HTT-202ENST00000502820 HELLSQ9NRZ9 838 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 SPATA6Q9NWH7 488 aaPredicted RBP5.87□□□□□ -1.47
HTT-202ENST00000502820 HCSTQ9UBK5 93 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 DDX41Q9UJV9 622 aaKnown RBP5.87□□□□□ -1.47
HTT-202ENST00000502820 GINS2Q9Y248 185 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 SIT1Q9Y3P8 196 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 PCDHB7Q9Y5E2 793 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 V9GYY5 206 aaPredicted RBP5.87□□□□□ -1.47
HTT-202ENST00000502820 ZMYM6O95789 1325 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 CCDC171Q6TFL3 1326 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 KMT2EQ8IZD2 1858 aa5.87□□□□□ -1.47
HTT-202ENST00000502820 CFAP47Q6ZTR5 3102 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 SPTBN4Q9H254 2564 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 BRWD1Q9NSI6 2320 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 MYH7P12883 1935 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 BAZ2AQ9UIF9 1905 aaKnown RBP5.86□□□□□ -1.47
HTT-202ENST00000502820 SIP14410 1827 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 HAS3O00219 553 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 ATP8B1O43520 1251 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 ORC4O43929 436 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 PPFIA4O75335 1185 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 CFBP00751 764 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 CHRNA1P02708 482 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 HSPD1P10809 573 aaKnown RBP5.86□□□□□ -1.47
HTT-202ENST00000502820 HOXB8P17481 243 aaPredicted RBP5.86□□□□□ -1.47
HTT-202ENST00000502820 MARK3P27448 753 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 GBP2P32456 591 aaPredicted RBP5.86□□□□□ -1.47
HTT-202ENST00000502820 PBX3P40426 434 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 MTHFRP42898 656 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 TBC1D8BQ0IIM8 1120 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 SPEM2Q0P670 501 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 NFX1Q12986 1120 aaKnown RBP5.86□□□□□ -1.47
HTT-202ENST00000502820 NMIQ13287 307 aaPredicted RBP5.86□□□□□ -1.47
HTT-202ENST00000502820 LPIN1Q14693 890 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 MCMDC2Q4G0Z9 681 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 XRRA1Q6P2D8 792 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 RSPH3Q86UC2 560 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 CRIPAKQ8N1N5 446 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 PLCD3Q8N3E9 789 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 SPRYD3Q8NCJ5 442 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 ZNF397Q8NF99 534 aaPredicted RBP5.86□□□□□ -1.47
HTT-202ENST00000502820 KIAA1524Q8TCG1 905 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 NSUN6Q8TEA1 469 aaKnown RBP5.86□□□□□ -1.47
HTT-202ENST00000502820 ATP8B4Q8TF62 1192 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 DNAJB3Q8WWF6 145 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 ZNF689Q96CS4 500 aaPredicted RBP5.86□□□□□ -1.47
HTT-202ENST00000502820 NECTIN4Q96NY8 510 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 RANBP17Q9H2T7 1088 aaKnown RBP5.86□□□□□ -1.47
HTT-202ENST00000502820 ADAM7Q9H2U9 754 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 TBC1D17Q9HA65 648 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 VAT1LQ9HCJ6 419 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 BRMS1Q9HCU9 246 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 CYP26B1Q9NR63 512 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 IL17RBQ9NRM6 502 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 RNF216Q9NWF9 866 aaPredicted RBP5.86□□□□□ -1.47
HTT-202ENST00000502820 CWC15Q9P013 229 aaKnown RBP5.86□□□□□ -1.47
HTT-202ENST00000502820 GMEB2Q9UKD1 530 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.86□□□□□ -1.47
HTT-202ENST00000502820 TET1Q8NFU7 2136 aa5.86□□□□□ -1.47
HTT-202ENST00000502820 VPS13AQ96RL7 3174 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 LOC102724159A0A0B4J2E5 919 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 SYCE3A1L190 88 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 KRBA1A5PL33 1030 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 POTEMA6NI47 508 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 LAMTOR5O43504 91 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 PLA2G6O60733 806 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 LRRN2O75325 713 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 EIF3JO75822 258 aaKnown RBP5.85□□□□□ -1.47
HTT-202ENST00000502820 FGAP02671 866 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 LGALS2P05162 132 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 GOLGA8HP0CJ92 632 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 SCG2P13521 617 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 SDSP20132 328 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 EDNRBP24530 442 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 CBX1P83916 185 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 KRT17Q04695 432 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 CTDSPL2Q05D32 466 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 ITIH3Q06033 890 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 PAK2Q13177 524 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 GPS2Q13227 327 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 CUL4AQ13619 759 aa5.85□□□□□ -1.47
HTT-202ENST00000502820 PWP2Q15269 919 aaKnown RBP5.85□□□□□ -1.47
HTT-202ENST00000502820 TERF2Q15554 542 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms