RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Zscan4fQ3URS2 506 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 PicalmQ7M6Y3 660 aaKnown RBP12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Daam2Q80U19 1115 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Taf1Q80UV9 1891 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Mtif3Q9CZD5 276 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Q9D2X8 372 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 SetQ9EQU5 289 aaKnown RBP12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Akr1a1Q9JII6 325 aa12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Top3bQ9Z321 862 aaKnown RBP12.36□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Slc16a6B1AT66 607 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Ccdc78D3Z5T1 437 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Rsph3aQ3UFY4 516 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Zbtb5Q7TQG0 670 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Tbc1d22bQ80VE5 505 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Samm50Q8BGH2 469 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Abi1Q8CBW3 481 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Plcd3Q8K2J0 785 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Atp6v0a4Q920R6 833 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Rsph3bQ9DA80 389 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 IydQ9DCX8 285 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Dnajb7Q9QYI8 312 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Ugt1a5B2RT14 529 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 AU015836B2RUM3 263 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Kcnt2D3Z649 1135 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Brd1E9PZ26 1189 aaKnown RBP12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Phox2bO35690 314 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Kcna1P16388 495 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Tmod1P49813 359 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Ccr1P51675 355 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Tmprss9P69525 1065 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 VcpQ01853 806 aaKnown RBP12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Ano7Q14AT5 859 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 RubcnlQ3TD16 648 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 4933416C03RikQ3V063 378 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Pum1Q80U78 1189 aaKnown RBP12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Csnk1g3Q8C4X2 424 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 KyQ8C8H8 661 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Uhrf1Q8VDF2 782 aaKnown RBP12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 F11Q91Y47 624 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Ophn1Q99J31 802 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Ogfod3Q9D136 315 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Angptl2Q9R045 493 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Peg12Q9WVA7 283 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Clcn5Q9WVD4 746 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 NcdnQ9Z0E0 729 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Sel1lQ9Z2G6 790 aa12.35□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Rbm8a2A0A0N4SUH6 174 aa12.34□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Dhx8A2A4P0 1244 aaKnown RBP12.34□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Gm3739L7N296 216 aa12.34□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Dmc1Q61880 340 aa12.34□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Kif1bpQ6ZPU9 617 aa12.34□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 PogkQ80TC5 607 aa12.34□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Rtfdc1Q99K95 307 aa12.34□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Fuca2Q99KR8 461 aa12.34□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Atoh8Q99NA2 322 aa12.34□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Dhx30Q99PU8 1217 aaKnown RBP12.34□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Rbm8aQ9CWZ3 174 aa12.34□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Spatc1lQ9D9W0 342 aa12.34□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Mgea5Q9EQQ9 916 aa12.34□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Trim54Q9ERP3 366 aa12.34□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 PorcnQ9JJJ7 461 aa12.34□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Nudt5Q9JKX6 218 aa12.34□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 AspmQ8CJ27 3122 aa12.34□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 KcpQ3U492 1550 aa12.34□□□□□ -0.43
Ccdc60-202ENSMUST00000086483 Olfr663A0A1B0GSI9 319 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Atp2b1G5E829 1220 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Cyp2d34L7N463 504 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 MafbP54841 323 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Irf3P70671 419 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Gcnt1Q09324 428 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Plpp4Q0VBU9 271 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Tfe3Q64092 572 aaKnown RBP12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 OcrlQ6NVF0 900 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 C2cd2lQ80X80 706 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Slc41a1Q8BJA2 512 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Serpina3bQ8BYY9 420 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Kif2bQ8C0N1 668 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Fam78aQ8C552 283 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Cyp2s1Q9DBX6 501 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 AllcQ9JHX6 414 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Aff1O88573 1216 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Dlg3P70175 849 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Sparcl1P70663 650 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Eif3j1Q3UGC7 261 aaKnown RBP12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Vwa2Q70UZ7 791 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Znf473Q8BI67 892 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Gpr61Q8C010 449 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Zc3h3Q8CHP0 950 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Ago4Q8CJF8 861 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Sbk1Q8QZX0 417 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Dnajc28Q8VCE1 385 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Extl2Q9ES89 330 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Adamts20P59511 1906 aa12.33□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Tcp10bE9PYJ0 438 aa12.32□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Tcp10cE9Q046 482 aa12.32□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Gm8909G3UXE9 396 aa12.32□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Ccl4P14097 92 aa12.32□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 ArP19091 899 aa12.32□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 Sash1P59808 1230 aa12.32□□□□□ -0.44
Ccdc60-202ENSMUST00000086483 RenbpP82343 430 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms