Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Gm25239-201ENSMUST00000174915 86 ntBASIC41.37■■■■■ 4.21
Uhrf1Q8VDF2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.37■■■■□ 3.73
Uhrf1Q8VDF2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
Uhrf1Q8VDF2 Gm24109-201ENSMUST00000175489 103 ntBASIC35.97■■■■□ 3.35
Uhrf1Q8VDF2 Gm15042-201ENSMUST00000120212 883 ntBASIC35.89■■■■□ 3.34
Uhrf1Q8VDF2 Gm15045-201ENSMUST00000117359 883 ntBASIC35.06■■■■□ 3.2
Uhrf1Q8VDF2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.95■■■■□ 3.19
Uhrf1Q8VDF2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Uhrf1Q8VDF2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
Uhrf1Q8VDF2 Gm23366-201ENSMUST00000175022 89 ntBASIC34.52■■■■□ 3.12
Uhrf1Q8VDF2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Uhrf1Q8VDF2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Uhrf1Q8VDF2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.64■■■□□ 2.98
Uhrf1Q8VDF2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Uhrf1Q8VDF2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Uhrf1Q8VDF2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.35■■■□□ 2.93
Uhrf1Q8VDF2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.31■■■□□ 2.92
Uhrf1Q8VDF2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Uhrf1Q8VDF2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.21■■■□□ 2.91
Uhrf1Q8VDF2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Uhrf1Q8VDF2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.91■■■□□ 2.86
Uhrf1Q8VDF2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Uhrf1Q8VDF2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Uhrf1Q8VDF2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.84
Uhrf1Q8VDF2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.76■■■□□ 2.83
Uhrf1Q8VDF2 Gm25238-201ENSMUST00000174914 89 ntBASIC32.74■■■□□ 2.83
Uhrf1Q8VDF2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.55■■■□□ 2.8
Uhrf1Q8VDF2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Uhrf1Q8VDF2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Uhrf1Q8VDF2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Uhrf1Q8VDF2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.74
Uhrf1Q8VDF2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Uhrf1Q8VDF2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.12■■■□□ 2.73
Uhrf1Q8VDF2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.99■■■□□ 2.71
Uhrf1Q8VDF2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Uhrf1Q8VDF2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
Uhrf1Q8VDF2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Uhrf1Q8VDF2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.77■■■□□ 2.68
Uhrf1Q8VDF2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.7■■■□□ 2.67
Uhrf1Q8VDF2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Uhrf1Q8VDF2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Uhrf1Q8VDF2 Gm25262-201ENSMUST00000174934 133 ntBASIC31.49■■■□□ 2.63
Uhrf1Q8VDF2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Uhrf1Q8VDF2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.41■■■□□ 2.62
Uhrf1Q8VDF2 Gm27325-201ENSMUST00000175467 74 ntBASIC31.41■■■□□ 2.62
Uhrf1Q8VDF2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.26■■■□□ 2.6
Uhrf1Q8VDF2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Uhrf1Q8VDF2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Uhrf1Q8VDF2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.06■■■□□ 2.56
Uhrf1Q8VDF2 Psd-208ENSMUST00000224556 2034 ntBASIC31.05■■■□□ 2.56
Uhrf1Q8VDF2 Rab21-202ENSMUST00000218831 843 ntBASIC31.03■■■□□ 2.56
Uhrf1Q8VDF2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.96■■■□□ 2.55
Uhrf1Q8VDF2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.93■■■□□ 2.54
Uhrf1Q8VDF2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Uhrf1Q8VDF2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
Uhrf1Q8VDF2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Uhrf1Q8VDF2 Gm26115-201ENSMUST00000175605 87 ntBASIC30.82■■■□□ 2.52
Uhrf1Q8VDF2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Uhrf1Q8VDF2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.76■■■□□ 2.52
Uhrf1Q8VDF2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.67■■■□□ 2.5
Uhrf1Q8VDF2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Uhrf1Q8VDF2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Uhrf1Q8VDF2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Uhrf1Q8VDF2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
Uhrf1Q8VDF2 Gm8109-201ENSMUST00000194076 746 ntBASIC30.61■■■□□ 2.49
Uhrf1Q8VDF2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.6■■■□□ 2.49
Uhrf1Q8VDF2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.59■■■□□ 2.49
Uhrf1Q8VDF2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.48■■■□□ 2.47
Uhrf1Q8VDF2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Uhrf1Q8VDF2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Uhrf1Q8VDF2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.39■■■□□ 2.45
Uhrf1Q8VDF2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Uhrf1Q8VDF2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Uhrf1Q8VDF2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Uhrf1Q8VDF2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.33■■■□□ 2.45
Uhrf1Q8VDF2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Uhrf1Q8VDF2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.3■■■□□ 2.44
Uhrf1Q8VDF2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Uhrf1Q8VDF2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Uhrf1Q8VDF2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Uhrf1Q8VDF2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Uhrf1Q8VDF2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Uhrf1Q8VDF2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
Uhrf1Q8VDF2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Uhrf1Q8VDF2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30■■■□□ 2.39
Uhrf1Q8VDF2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30■■■□□ 2.39
Uhrf1Q8VDF2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Uhrf1Q8VDF2 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.97■■■□□ 2.39
Uhrf1Q8VDF2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Uhrf1Q8VDF2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.89■■■□□ 2.38
Uhrf1Q8VDF2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
Uhrf1Q8VDF2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.82■■■□□ 2.36
Uhrf1Q8VDF2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.79■■■□□ 2.36
Uhrf1Q8VDF2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Uhrf1Q8VDF2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Uhrf1Q8VDF2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Uhrf1Q8VDF2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Uhrf1Q8VDF2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
Uhrf1Q8VDF2 Gm27322-201ENSMUST00000184007 104 ntBASIC29.67■■■□□ 2.34
Uhrf1Q8VDF2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms