RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Fbxl5Q8C2S5 690 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Eif4a3Q91VC3 411 aaKnown RBP14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Fip1l1Q9D824 581 aaKnown RBP14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 SftpbP50405 377 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Trim56Q80VI1 734 aaKnown RBP14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Kctd10Q922M3 315 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 NvlQ9DBY8 855 aaKnown RBP14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Hic1Q9R1Y5 733 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 DffaO54786 331 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Slc44a1Q6X893 653 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Asic4Q7TNS7 539 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Zfp113Q8C689 439 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Emilin1Q99K41 1017 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Capn10Q9ESK3 666 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Ccdc22Q9JIG7 627 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Slc25a13Q9QXX4 676 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Gm45194A0A140LJG2 572 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Mroh8E9PYI4 1049 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Adcy7P51829 1099 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Scg2Q03517 617 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Rassf9Q8K342 435 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 GsdmeQ9Z2D3 512 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Gm28042B7ZCM9 1014 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Eif3dO70194 548 aaKnown RBP14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Zfp408H7BX78 710 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Fam178bQ24JP3 464 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Zbtb38Q3LR78 1197 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Olfm4Q3UZZ4 505 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Gpr108Q91WD0 569 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Dnajc7Q9QYI3 494 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Il7P10168 154 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 TwistnbQ78WZ7 330 aaKnown RBP14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 FtcdQ91XD4 541 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 AceP09470 1312 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Stox1B2RQL2 990 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 GmncQ3URY2 333 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Ino80dQ66JY2 873 aaKnown RBP14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Tmem132dQ76HP3 1097 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Hps3Q91VB4 1002 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Ndel1Q9ERR1 345 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Cdkl2Q9QUK0 568 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Olfr310B2RVZ1 332 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Kcna3P16390 528 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Krt78E9Q0F0 1068 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Gm8897L7N294 181 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Pde6aP27664 859 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 NfkbibQ60778 359 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Dpp8Q80YA7 892 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Pm20d1Q8C165 503 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Usp15Q8R5H1 981 aa14.86□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Tekt4Q149S1 447 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Ipo5Q8BKC5 1097 aaKnown RBP14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Hip1Q8VD75 1029 aaKnown RBP14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Atp6v1b1Q91YH6 513 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Cmtm5Q9D6G9 156 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 IydQ9DCX8 285 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Apol6B7ZC55 329 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Setd3Q91WC0 594 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Habp4Q9JKS5 411 aaKnown RBP14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Mtrf1Q8K126 446 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Q8VDP2 222 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Sf3b3Q921M3 1217 aaKnown RBP14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Hps4Q99KG7 671 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Gipc2Q9Z2H7 314 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Uhrf1bp1lA2RSJ4 1457 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Ap1g2O88512 791 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Fam160a1Q505K2 1081 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Chmp2bQ8BJF9 213 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Afap1l1Q8BZI0 768 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Arfip2Q8K221 341 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Dctpp1Q9QY93 170 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Angpt1O08538 498 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Vav2Q60992 868 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 AlcamQ61490 583 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 ZwilchQ8R060 589 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Atp5dQ9D3D9 168 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Pdzd9Q9D9M4 266 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 IkbkbO88351 757 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Lsp1P19973 330 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Gucy2cQ3UWA6 1072 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Q66JV7 365 aa14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Gps1Q99LD4 471 aaKnown RBP14.85□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Atp2c2A7L9Z8 944 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Cav1P49817 178 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Tlr7P58681 1050 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 NfibP97863 570 aaKnown RBP14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Tmc5Q32NZ6 967 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Pabpc4Q6PHQ9 660 aaKnown RBP14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 CtsqQ91ZF4 343 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Gm4869A0A1B0GSG7 984 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 A0A286YCQ6 122 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 MybP06876 636 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Nek1P51954 1203 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 HibchQ8QZS1 385 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Plod1Q9R0E2 728 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Syde2E9PUP1 1314 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Supt3B0QZW4 406 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Cdh2P15116 906 aa14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Chordc1Q9D1P4 331 aaKnown RBP14.84□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Eif2ak1Q9Z2R9 619 aa14.84□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms