Protein–RNA interactions for Protein: Q8R5H1

Usp15, Ubiquitin carboxyl-terminal hydrolase 15, mousemouse

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp15Q8R5H1 Gm25239-201ENSMUST00000174915 86 ntBASIC40.03■■■■■ 4
Usp15Q8R5H1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.21■■■■□ 3.55
Usp15Q8R5H1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
Usp15Q8R5H1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
Usp15Q8R5H1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.37■■■■□ 3.25
Usp15Q8R5H1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Usp15Q8R5H1 Gm24109-201ENSMUST00000175489 103 ntBASIC34.9■■■■□ 3.18
Usp15Q8R5H1 Gm15042-201ENSMUST00000120212 883 ntBASIC34.57■■■■□ 3.12
Usp15Q8R5H1 Psd-208ENSMUST00000224556 2034 ntBASIC34.46■■■■□ 3.11
Usp15Q8R5H1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Usp15Q8R5H1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.81■■■■□ 3
Usp15Q8R5H1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.78■■■■□ 3
Usp15Q8R5H1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Usp15Q8R5H1 Gm15045-201ENSMUST00000117359 883 ntBASIC33.71■■■□□ 2.99
Usp15Q8R5H1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.98
Usp15Q8R5H1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
Usp15Q8R5H1 Gm23366-201ENSMUST00000175022 89 ntBASIC33.38■■■□□ 2.93
Usp15Q8R5H1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
Usp15Q8R5H1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Usp15Q8R5H1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Usp15Q8R5H1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Usp15Q8R5H1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Usp15Q8R5H1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Usp15Q8R5H1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.7■■■□□ 2.83
Usp15Q8R5H1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.4■■■□□ 2.78
Usp15Q8R5H1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Usp15Q8R5H1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Usp15Q8R5H1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.36■■■□□ 2.77
Usp15Q8R5H1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.34■■■□□ 2.77
Usp15Q8R5H1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Usp15Q8R5H1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Usp15Q8R5H1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Usp15Q8R5H1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Usp15Q8R5H1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Usp15Q8R5H1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32■■■□□ 2.71
Usp15Q8R5H1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
Usp15Q8R5H1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Usp15Q8R5H1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Usp15Q8R5H1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Usp15Q8R5H1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.77■■■□□ 2.68
Usp15Q8R5H1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Usp15Q8R5H1 Gm25238-201ENSMUST00000174914 89 ntBASIC31.72■■■□□ 2.67
Usp15Q8R5H1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Usp15Q8R5H1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Usp15Q8R5H1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Usp15Q8R5H1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.38■■■□□ 2.61
Usp15Q8R5H1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Usp15Q8R5H1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.29■■■□□ 2.6
Usp15Q8R5H1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Usp15Q8R5H1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
Usp15Q8R5H1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.21■■■□□ 2.59
Usp15Q8R5H1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Usp15Q8R5H1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
Usp15Q8R5H1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Usp15Q8R5H1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Usp15Q8R5H1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.99■■■□□ 2.55
Usp15Q8R5H1 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.99■■■□□ 2.55
Usp15Q8R5H1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Usp15Q8R5H1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Usp15Q8R5H1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Usp15Q8R5H1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Usp15Q8R5H1 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.87■■■□□ 2.53
Usp15Q8R5H1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
Usp15Q8R5H1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Usp15Q8R5H1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Usp15Q8R5H1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.67■■■□□ 2.5
Usp15Q8R5H1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.65■■■□□ 2.5
Usp15Q8R5H1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.65■■■□□ 2.5
Usp15Q8R5H1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Usp15Q8R5H1 Gm25262-201ENSMUST00000174934 133 ntBASIC30.62■■■□□ 2.49
Usp15Q8R5H1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Usp15Q8R5H1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Usp15Q8R5H1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
Usp15Q8R5H1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Usp15Q8R5H1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Usp15Q8R5H1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Usp15Q8R5H1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Usp15Q8R5H1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.35■■■□□ 2.45
Usp15Q8R5H1 Gm27325-201ENSMUST00000175467 74 ntBASIC30.21■■■□□ 2.43
Usp15Q8R5H1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Usp15Q8R5H1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.16■■■□□ 2.42
Usp15Q8R5H1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.11■■■□□ 2.41
Usp15Q8R5H1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Usp15Q8R5H1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Usp15Q8R5H1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Usp15Q8R5H1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
Usp15Q8R5H1 Gm26115-201ENSMUST00000175605 87 ntBASIC30.03■■■□□ 2.4
Usp15Q8R5H1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Usp15Q8R5H1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.01■■■□□ 2.39
Usp15Q8R5H1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Usp15Q8R5H1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
Usp15Q8R5H1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30■■■□□ 2.39
Usp15Q8R5H1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.96■■■□□ 2.39
Usp15Q8R5H1 Rab21-202ENSMUST00000218831 843 ntBASIC29.94■■■□□ 2.38
Usp15Q8R5H1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Usp15Q8R5H1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.92■■■□□ 2.38
Usp15Q8R5H1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Usp15Q8R5H1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Usp15Q8R5H1 Gm8109-201ENSMUST00000194076 746 ntBASIC29.81■■■□□ 2.36
Usp15Q8R5H1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms