RNA–Protein interactions for RNA: tC(GCA)G

tC(GCA)G, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)G, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)GtC(GCA)G URA10P30402 227 aa2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G SRB4P32569 687 aa2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G SSE1P32589 693 aaKnown RBP2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G SWH1P35845 1188 aa2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G SET3P36124 751 aa2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G YER034WP40022 185 aaKnown RBP2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G YEN1P40028 759 aa2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G LCP5P40079 357 aaPredicted RBP2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G YMR134WP40207 237 aa2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G HOS2P53096 452 aaPredicted RBP2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G SCW11P53189 542 aa2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G RHO4Q00246 291 aa2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G NAN1Q02931 896 aaKnown RBP2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G SWF1Q04629 336 aa2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G COX20Q04935 205 aa2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G CDC123Q05791 360 aa2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G TPO3Q06451 622 aa2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G SSK1Q07084 712 aa2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G GAT3Q07928 141 aa2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G RDL2Q08742 149 aaKnown RBP2.74□□□□□ -1.97
tC(GCA)GtC(GCA)G RAD1P06777 1100 aa2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G RHO1P06780 209 aaKnown RBP2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G AAC3P18238 307 aa2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G URE2P23202 354 aaKnown RBP2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G URA7P28274 579 aaKnown RBP2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G YPT7P32939 208 aa2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G LOS1P33418 1100 aaPredicted RBP2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G ANS1P38832 159 aa2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G NSG1P38837 291 aa2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G END3P39013 349 aa2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G AIM2P39721 246 aa2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G YER084WP40057 128 aa2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G RFC4P40339 323 aaKnown RBP2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G MIC19P43594 170 aa2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G MTM1P53320 366 aa2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G YPL039WQ03080 316 aa2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G RCE1Q03530 315 aa2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G YAP6Q03935 383 aa2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G YBL113CQ7M4S9 792 aa2.73□□□□□ -1.97
tC(GCA)GtC(GCA)G PHO81P17442 1178 aa2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G RRP43P25359 394 aaPredicted RBP2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G MGT1P26188 188 aa2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G AUA1P32450 94 aa2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G COS9P36034 407 aa2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G SHM2P37291 469 aaKnown RBP2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G YBR138CP38277 524 aa2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G CTR2P38865 189 aa2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G ATG3P40344 310 aa2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G GZF3P42944 551 aaKnown RBP2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G UBC13P52490 153 aa2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G TAF6P53040 516 aa2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G SHY1P53266 389 aa2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G YNL165WP53891 406 aa2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G YPL108WQ02872 168 aaPredicted RBP2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G KAP120Q02932 1032 aa2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G MET31Q03081 177 aa2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G MUM3Q08750 479 aa2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G FCY22Q12119 530 aa2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G ATG34Q12292 412 aa2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G FSH3Q99369 266 aa2.72□□□□□ -1.97
tC(GCA)GtC(GCA)G RAS2P01120 322 aaKnown RBP2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G ALG7P07286 448 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G UGA1P17649 471 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G RPB5P20434 215 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G HXT1P32465 570 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G PPG1P32838 368 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G SOF1P33750 489 aaKnown RBP2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G PBP2P38151 413 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
tC(GCA)GtC(GCA)G BMT2P38278 337 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G HOS4P40480 1083 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G LEM3P42838 414 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G YPT32P51996 222 aaKnown RBP2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G RIM8P53179 542 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G BUD9P53226 547 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G HST2P53686 357 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G RHO5P53879 331 aaKnown RBP2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G YNL140CP53910 189 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G RPL6AQ02326 176 aaKnown RBP2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G MTG1Q03151 367 aaPredicted RBP2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G YMR279CQ03263 540 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G SSY1Q03770 852 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G CSN9Q03981 162 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G CTS2Q06350 511 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G FDH1Q08911 376 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G YOR223WQ12015 292 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G NMD4Q12129 218 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G RUD3Q12234 484 aaKnown RBP2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G NPC2Q12408 173 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G YMR030W-AQ3E760 96 aa2.71□□□□□ -1.98
tC(GCA)GtC(GCA)G YAL064W-BO13512 126 aa2.7□□□□□ -1.98
tC(GCA)GtC(GCA)G ATP2P00830 511 aaKnown RBP2.7□□□□□ -1.98
tC(GCA)GtC(GCA)G SPT3P06844 337 aa2.7□□□□□ -1.98
tC(GCA)GtC(GCA)G RPB4P20433 221 aaPredicted RBP2.7□□□□□ -1.98
tC(GCA)GtC(GCA)G EHD3P28817 500 aa2.7□□□□□ -1.98
tC(GCA)GtC(GCA)G MDH3P32419 343 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
tC(GCA)GtC(GCA)G VPS21P36017 210 aaKnown RBP2.7□□□□□ -1.98
tC(GCA)GtC(GCA)G GLY1P37303 387 aaKnown RBP2.7□□□□□ -1.98
tC(GCA)GtC(GCA)G YHR097CP38809 366 aaKnown RBP2.7□□□□□ -1.98
tC(GCA)GtC(GCA)G ATG7P38862 630 aa2.7□□□□□ -1.98
tC(GCA)GtC(GCA)G RTA1P53047 317 aa2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms