RNA–Protein interactions for RNA: snR19

snR19, Transcript of U1 spliceosomal RNA (U1 snRNA), yeast

Gene snR19, Length 568 nt, Biotype snRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR19	snR19	HIS4	P00815	799 aa	Known RBP	4.58	□□□□□ -1.68
snR19	snR19	MF(ALPHA)1	P01149	165 aa		4.58	□□□□□ -1.68
snR19	snR19	GAL4	P04386	881 aa		4.58	□□□□□ -1.68
snR19	snR19	RPL4A	P10664	362 aa	Known RBP	4.58	□□□□□ -1.68
snR19	snR19	MRP13	P12686	339 aa		4.58	□□□□□ -1.68
snR19	snR19	ATR1	P13090	542 aa		4.58	□□□□□ -1.68
snR19	snR19	CMK2	P22517	447 aa		4.58	□□□□□ -1.68
snR19	snR19	PRR1	P28708	518 aa		4.58	□□□□□ -1.68
snR19	snR19	PMT2	P31382	759 aa		4.58	□□□□□ -1.68
snR19	snR19	TFC1	P32367	649 aa		4.58	□□□□□ -1.68
snR19	snR19	ANR2	P36090	516 aa	Predicted RBP	4.58	□□□□□ -1.68
snR19	snR19	NTR2	P36118	322 aa	Predicted RBP	4.58	□□□□□ -1.68
snR19	snR19	UTH1	P36135	365 aa		4.58	□□□□□ -1.68
snR19	snR19	UTP30	P36144	274 aa	Known RBP	4.58	□□□□□ -1.68
snR19	snR19	MRPL37	P36532	105 aa		4.58	□□□□□ -1.68
snR19	snR19	APE4	P38821	490 aa		4.58	□□□□□ -1.68
snR19	snR19	POP2	P39008	433 aa		4.58	□□□□□ -1.68
snR19	snR19	AIM2	P39721	246 aa		4.58	□□□□□ -1.68
snR19	snR19	AIM10	P39965	576 aa	Known RBP	4.58	□□□□□ -1.68
snR19	snR19	TPA1	P40032	644 aa	Known RBP	4.58	□□□□□ -1.68
snR19	snR19	THO1	P40040	218 aa	Known RBP	4.58	□□□□□ -1.68
snR19	snR19	PFK26	P40433	827 aa	Known RBP	4.58	□□□□□ -1.68
snR19	snR19	YIL024C	P40543	189 aa		4.58	□□□□□ -1.68
snR19	snR19	GTT1	P40582	234 aa		4.58	□□□□□ -1.68
snR19	snR19	CIN5	P40917	295 aa		4.58	□□□□□ -1.68
snR19	snR19	CHS6	P40955	746 aa		4.58	□□□□□ -1.68
snR19	snR19	RPL4B	P49626	362 aa	Known RBP	4.58	□□□□□ -1.68
snR19	snR19	YGL108C	P53139	140 aa		4.58	□□□□□ -1.68
snR19	snR19	YNL146W	P53906	100 aa		4.58	□□□□□ -1.68
snR19	snR19	ALG11	P53954	548 aa	Known RBP	4.58	□□□□□ -1.68
snR19	snR19	MPS1	P54199	764 aa		4.58	□□□□□ -1.68
snR19	snR19	SMP3	Q04174	516 aa		4.58	□□□□□ -1.68
snR19	snR19	PDR8	Q06149	701 aa		4.58	□□□□□ -1.68
snR19	snR19	VTA1	Q06263	330 aa		4.58	□□□□□ -1.68
snR19	snR19	YLR352W	Q06479	807 aa		4.58	□□□□□ -1.68
snR19	snR19	RAX1	Q08760	435 aa		4.58	□□□□□ -1.68
snR19	snR19	HMS1	Q12398	434 aa		4.58	□□□□□ -1.68
snR19	snR19	CMC2	Q3E7A4	109 aa		4.58	□□□□□ -1.68
snR19	snR19	LAG2	Q92325	660 aa		4.58	□□□□□ -1.68
snR19	snR19	FOB1	O13329	566 aa		4.57	□□□□□ -1.68
snR19	snR19	VMA16	P23968	213 aa		4.57	□□□□□ -1.68
snR19	snR19	RER1	P25560	188 aa		4.57	□□□□□ -1.68
snR19	snR19	SSH4	P32343	579 aa		4.57	□□□□□ -1.68
snR19	snR19	ASF2	P32448	525 aa	Predicted RBP	4.57	□□□□□ -1.68
snR19	snR19	YBR056W	P38081	501 aa		4.57	□□□□□ -1.68
snR19	snR19	RFC3	P38629	340 aa		4.57	□□□□□ -1.68
snR19	snR19	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
snR19	snR19	COS4	P43542	379 aa		4.57	□□□□□ -1.68
snR19	snR19	AGX1	P43567	385 aa		4.57	□□□□□ -1.68
snR19	snR19	COS5	P47187	383 aa		4.57	□□□□□ -1.68
snR19	snR19	PRP24	P49960	444 aa	Known RBP	4.57	□□□□□ -1.68
snR19	snR19	YGR016W	P53209	190 aa		4.57	□□□□□ -1.68
snR19	snR19	MNT4	P53745	580 aa		4.57	□□□□□ -1.68
snR19	snR19	COS1	P53822	381 aa		4.57	□□□□□ -1.68
snR19	snR19	CAF40	P53829	373 aa		4.57	□□□□□ -1.68
snR19	snR19	SED5	Q01590	340 aa		4.57	□□□□□ -1.68
snR19	snR19	YMR010W	Q03687	405 aa		4.57	□□□□□ -1.68
snR19	snR19	YDR249C	Q03787	373 aa		4.57	□□□□□ -1.68
snR19	snR19	RCO1	Q04779	684 aa		4.57	□□□□□ -1.68
snR19	snR19	SNO4	Q04902	237 aa		4.57	□□□□□ -1.68
snR19	snR19	SPO77	Q06134	477 aa		4.57	□□□□□ -1.68
snR19	snR19	IES4	Q08561	116 aa		4.57	□□□□□ -1.68
snR19	snR19	HSP33	Q08914	237 aa	Known RBP	4.57	□□□□□ -1.68
snR19	snR19	HSP32	Q08992	237 aa		4.57	□□□□□ -1.68
snR19	snR19	NUS1	Q12063	375 aa		4.57	□□□□□ -1.68
snR19	snR19	AEP3	Q12089	606 aa		4.57	□□□□□ -1.68
snR19	snR19	REX3	Q12090	404 aa		4.57	□□□□□ -1.68
snR19	snR19	YOR214C	Q12282	236 aa		4.57	□□□□□ -1.68
snR19	snR19	FMP16	Q12497	93 aa		4.57	□□□□□ -1.68
snR19	snR19	YPT6	Q99260	215 aa		4.57	□□□□□ -1.68
snR19	snR19	CSF1	Q12150	2958 aa		4.57	□□□□□ -1.68
snR19	snR19	GAL3	P13045	520 aa		4.56	□□□□□ -1.68
snR19	snR19	NSP1	P14907	823 aa	Known RBP	4.56	□□□□□ -1.68
snR19	snR19	TRX1	P22217	103 aa	Known RBP	4.56	□□□□□ -1.68
snR19	snR19	YPK3	P38070	525 aa		4.56	□□□□□ -1.68
snR19	snR19	CHK1	P38147	527 aa		4.56	□□□□□ -1.68
snR19	snR19	YBR032W	P38223	100 aa		4.56	□□□□□ -1.68
snR19	snR19	TRM5	P38793	499 aa		4.56	□□□□□ -1.68
snR19	snR19	UTP9	P38882	575 aa	Known RBP	4.56	□□□□□ -1.68
snR19	snR19	YER184C	P39961	794 aa		4.56	□□□□□ -1.68
snR19	snR19	YGR210C	P42942	411 aa		4.56	□□□□□ -1.68
snR19	snR19	FET5	P43561	622 aa		4.56	□□□□□ -1.68
snR19	snR19	YFR018C	P43599	363 aa		4.56	□□□□□ -1.68
snR19	snR19	RMD8	P43620	662 aa		4.56	□□□□□ -1.68
snR19	snR19	TAF6	P53040	516 aa		4.56	□□□□□ -1.68
snR19	snR19	RMR1	P53060	241 aa		4.56	□□□□□ -1.68
snR19	snR19	RTT102	P53330	157 aa		4.56	□□□□□ -1.68
snR19	snR19	OSH6	Q02201	448 aa		4.56	□□□□□ -1.68
snR19	snR19	NHP10	Q03435	203 aa		4.56	□□□□□ -1.68
snR19	snR19	URH1	Q04179	340 aa		4.56	□□□□□ -1.68
snR19	snR19	ARP10	Q04549	284 aa		4.56	□□□□□ -1.68
snR19	snR19	IVY1	Q04934	453 aa		4.56	□□□□□ -1.68
snR19	snR19	NDE2	Q07500	545 aa		4.56	□□□□□ -1.68
snR19	snR19	MCH4	Q08268	501 aa		4.56	□□□□□ -1.68
snR19	snR19	MUM3	Q08750	479 aa		4.56	□□□□□ -1.68
snR19	snR19	AFT2	Q08957	416 aa		4.56	□□□□□ -1.68
snR19	snR19	YPQ1	Q12010	308 aa		4.56	□□□□□ -1.68
snR19	snR19	HRT3	Q12347	344 aa		4.56	□□□□□ -1.68
snR19	snR19	ATG31	Q12421	196 aa		4.56	□□□□□ -1.68
snR19	snR19	RRI1	Q12468	440 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms