RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C PAC11P40960 533 aa2.97□□□□□ -1.93
CUP9YPL177C EGT2P42835 1041 aa2.97□□□□□ -1.93
CUP9YPL177C AIM24P47127 394 aa2.97□□□□□ -1.93
CUP9YPL177C SHY1P53266 389 aa2.97□□□□□ -1.93
CUP9YPL177C ERO1Q03103 563 aa2.97□□□□□ -1.93
CUP9YPL177C YMR102CQ03177 834 aa2.97□□□□□ -1.93
CUP9YPL177C RTN1Q04947 295 aaKnown RBP2.97□□□□□ -1.93
CUP9YPL177C PLP2Q12017 286 aa2.97□□□□□ -1.93
CUP9YPL177C YOP1Q12402 180 aa2.97□□□□□ -1.93
CUP9YPL177C EAF3Q12432 401 aa2.97□□□□□ -1.93
CUP9YPL177C YCR024C-BQ3E7Z8 88 aa2.97□□□□□ -1.93
CUP9YPL177C TPK3P05986 398 aa2.96□□□□□ -1.94
CUP9YPL177C SKT5P34226 696 aa2.96□□□□□ -1.94
CUP9YPL177C DOA1P36037 715 aa2.96□□□□□ -1.94
CUP9YPL177C GPX2P38143 162 aa2.96□□□□□ -1.94
CUP9YPL177C RXT2P38255 430 aa2.96□□□□□ -1.94
CUP9YPL177C MIG3P39943 394 aa2.96□□□□□ -1.94
CUP9YPL177C UTP18P40362 594 aaPredicted RBP2.96□□□□□ -1.94
CUP9YPL177C HAC1P41546 238 aa2.96□□□□□ -1.94
CUP9YPL177C YFR057WP43625 151 aa2.96□□□□□ -1.94
CUP9YPL177C BIR1P47134 954 aa2.96□□□□□ -1.94
CUP9YPL177C BNS1P50084 137 aa2.96□□□□□ -1.94
CUP9YPL177C MST27P53176 234 aa2.96□□□□□ -1.94
CUP9YPL177C RRN9P53437 365 aa2.96□□□□□ -1.94
CUP9YPL177C YMR027WQ04371 470 aa2.96□□□□□ -1.94
CUP9YPL177C SMC5Q08204 1093 aa2.96□□□□□ -1.94
CUP9YPL177C PAB1P04147 577 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94 RIP-Chip
CUP9YPL177C PIS1P06197 220 aaKnown RBP2.95□□□□□ -1.94
CUP9YPL177C ARF1P11076 181 aaKnown RBP2.95□□□□□ -1.94
CUP9YPL177C PCL1P24867 279 aa2.95□□□□□ -1.94
CUP9YPL177C DPH2P32461 534 aa2.95□□□□□ -1.94
CUP9YPL177C NUP2P32499 720 aa2.95□□□□□ -1.94
CUP9YPL177C KAP104P38217 918 aaKnown RBP2.95□□□□□ -1.94
CUP9YPL177C RTC2P38279 296 aa2.95□□□□□ -1.94
CUP9YPL177C YHR177WP38867 453 aa2.95□□□□□ -1.94
CUP9YPL177C MAM33P40513 266 aa2.95□□□□□ -1.94
CUP9YPL177C GAB1P41733 394 aa2.95□□□□□ -1.94
CUP9YPL177C ASN2P49090 572 aaKnown RBP2.95□□□□□ -1.94
CUP9YPL177C CRH1P53301 507 aa2.95□□□□□ -1.94
CUP9YPL177C RTT102P53330 157 aa2.95□□□□□ -1.94
CUP9YPL177C PRP3Q03338 469 aaPredicted RBP2.95□□□□□ -1.94
CUP9YPL177C IPK1Q06667 281 aa2.95□□□□□ -1.94
CUP9YPL177C JID1Q12350 301 aa2.95□□□□□ -1.94
CUP9YPL177C TOA2P32774 122 aa2.94□□□□□ -1.94
CUP9YPL177C MCR1P36060 302 aaKnown RBP2.94□□□□□ -1.94
CUP9YPL177C UTH1P36135 365 aa2.94□□□□□ -1.94
CUP9YPL177C BAT1P38891 393 aaKnown RBP2.94□□□□□ -1.94
CUP9YPL177C OXA1P39952 402 aa2.94□□□□□ -1.94
CUP9YPL177C EPL1P43572 832 aa2.94□□□□□ -1.94
CUP9YPL177C ABM1P47146 123 aa2.94□□□□□ -1.94
CUP9YPL177C MLC1P53141 149 aa2.94□□□□□ -1.94
CUP9YPL177C YGL039WP53183 348 aaKnown RBP2.94□□□□□ -1.94
CUP9YPL177C MFG1Q07684 458 aa2.94□□□□□ -1.94
CUP9YPL177C LOT6Q07923 191 aa2.94□□□□□ -1.94
CUP9YPL177C LDS2Q08218 356 aa2.94□□□□□ -1.94
CUP9YPL177C RPB5P20434 215 aa2.93□□□□□ -1.94
CUP9YPL177C TIR2P33890 251 aa2.93□□□□□ -1.94
CUP9YPL177C SPT10P35208 640 aa2.93□□□□□ -1.94
CUP9YPL177C ECM8P38246 354 aa2.93□□□□□ -1.94
CUP9YPL177C GEP4P38812 185 aa2.93□□□□□ -1.94
CUP9YPL177C PTI1P39927 425 aaPredicted RBP2.93□□□□□ -1.94
CUP9YPL177C ATG18P43601 500 aa2.93□□□□□ -1.94
CUP9YPL177C TRM112P53738 135 aaPredicted RBP2.93□□□□□ -1.94
CUP9YPL177C ALF1P53904 254 aa2.93□□□□□ -1.94
CUP9YPL177C HAL1Q01766 294 aa2.93□□□□□ -1.94
CUP9YPL177C PRM6Q04705 352 aa2.93□□□□□ -1.94
CUP9YPL177C LIP2Q06005 328 aa2.93□□□□□ -1.94
CUP9YPL177C NOP6Q07623 225 aaKnown RBP2.93□□□□□ -1.94
CUP9YPL177C AAT2P23542 418 aaKnown RBP2.92□□□□□ -1.94
CUP9YPL177C PUP2P32379 260 aa2.92□□□□□ -1.94
CUP9YPL177C ANR2P36090 516 aaPredicted RBP2.92□□□□□ -1.94
CUP9YPL177C WSS1P38838 269 aa2.92□□□□□ -1.94
CUP9YPL177C YPR091CQ06833 770 aa2.92□□□□□ -1.94
CUP9YPL177C AAD15Q08361 143 aa2.92□□□□□ -1.94
CUP9YPL177C FCY22Q12119 530 aa2.92□□□□□ -1.94
CUP9YPL177C YDR061WQ12298 539 aa2.92□□□□□ -1.94
CUP9YPL177C NAG1Q8TGN9 163 aa2.92□□□□□ -1.94
CUP9YPL177C RNA1P11745 407 aaKnown RBP2.91□□□□□ -1.94
CUP9YPL177C NAT1P12945 854 aaKnown RBP2.91□□□□□ -1.94
CUP9YPL177C DAP2P18962 818 aa2.91□□□□□ -1.94
CUP9YPL177C RAD5P32849 1169 aaPredicted RBP2.91□□□□□ -1.94
CUP9YPL177C YSW1P38280 609 aa2.91□□□□□ -1.94
CUP9YPL177C APJ1P53940 528 aa2.91□□□□□ -1.94
CUP9YPL177C RCF1Q03713 159 aa2.91□□□□□ -1.94
CUP9YPL177C TSA2Q04120 196 aa2.91□□□□□ -1.94
CUP9YPL177C YET2Q04210 160 aa2.91□□□□□ -1.94
CUP9YPL177C FRE6Q12473 712 aa2.91□□□□□ -1.94
CUP9YPL177C SOD1P00445 154 aaKnown RBP2.9□□□□□ -1.95
CUP9YPL177C HSP82P02829 709 aaKnown RBP2.9□□□□□ -1.95
CUP9YPL177C PRR1P28708 518 aa2.9□□□□□ -1.95
CUP9YPL177C YNL208WP40159 199 aaKnown RBP2.9□□□□□ -1.95
CUP9YPL177C CLD1P53264 445 aa2.9□□□□□ -1.95
CUP9YPL177C CMS1Q07897 291 aaKnown RBP2.9□□□□□ -1.95
CUP9YPL177C HTZ1Q12692 134 aaKnown RBP2.9□□□□□ -1.95
CUP9YPL177C SRN2Q99176 213 aa2.9□□□□□ -1.95
CUP9YPL177C SCH9P11792 824 aaKnown RBP2.89□□□□□ -1.95
CUP9YPL177C DFG10P40526 253 aa2.89□□□□□ -1.95
CUP9YPL177C YPL107WQ02873 248 aa2.89□□□□□ -1.95
CUP9YPL177C YFH1Q07540 174 aa2.89□□□□□ -1.95
CUP9YPL177C GAT3Q07928 141 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms