RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W MDE1P47095 244 aa2.08□□□□□ -2.08
BRO1YPL084W YGL242CP53066 181 aa2.08□□□□□ -2.08
BRO1YPL084W RRP46P53256 223 aaPredicted RBP2.08□□□□□ -2.08
BRO1YPL084W COS1P53822 381 aa2.08□□□□□ -2.08
BRO1YPL084W MDM36Q06820 579 aa2.08□□□□□ -2.08
BRO1YPL084W AAD15Q08361 143 aa2.08□□□□□ -2.08
BRO1YPL084W RSA1Q08932 381 aa2.08□□□□□ -2.08
BRO1YPL084W AHC1Q12433 566 aa2.08□□□□□ -2.08
BRO1YPL084W DNF1P32660 1571 aa2.07□□□□□ -2.08
BRO1YPL084W NAM2P11325 894 aa2.07□□□□□ -2.08
BRO1YPL084W CLN3P13365 580 aa2.07□□□□□ -2.08
BRO1YPL084W UBA1P22515 1024 aaKnown RBP2.07□□□□□ -2.08
BRO1YPL084W POP5P28005 173 aa2.07□□□□□ -2.08
BRO1YPL084W CAJ1P39101 391 aa2.07□□□□□ -2.08
BRO1YPL084W YGR210CP42942 411 aa2.07□□□□□ -2.08
BRO1YPL084W LCB3P47013 409 aa2.07□□□□□ -2.08
BRO1YPL084W YJR085CP47131 105 aaKnown RBP2.07□□□□□ -2.08
BRO1YPL084W ATP22P50273 684 aaPredicted RBP2.07□□□□□ -2.08
BRO1YPL084W RRN9P53437 365 aa2.07□□□□□ -2.08
BRO1YPL084W MTQ1P53944 314 aa2.07□□□□□ -2.08
BRO1YPL084W ADH2P00331 348 aaKnown RBP2.07□□□□□ -2.08
BRO1YPL084W DPH5P32469 300 aaPredicted RBP2.07□□□□□ -2.08
BRO1YPL084W CSE2P33308 149 aa2.07□□□□□ -2.08
BRO1YPL084W MCR1P36060 302 aaKnown RBP2.07□□□□□ -2.08
BRO1YPL084W GPX2P38143 162 aa2.07□□□□□ -2.08
BRO1YPL084W SIF2P38262 535 aa2.07□□□□□ -2.08
BRO1YPL084W NOP6Q07623 225 aaKnown RBP2.07□□□□□ -2.08
BRO1YPL084W PAB1P04147 577 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
BRO1YPL084W RNA1P11745 407 aaKnown RBP2.06□□□□□ -2.08
BRO1YPL084W YBL028CP38202 106 aa2.06□□□□□ -2.08
BRO1YPL084W GEP4P38812 185 aa2.06□□□□□ -2.08
BRO1YPL084W AIM24P47127 394 aa2.06□□□□□ -2.08
BRO1YPL084W BTN2P53286 410 aa2.06□□□□□ -2.08
BRO1YPL084W TRM112P53738 135 aaPredicted RBP2.06□□□□□ -2.08
BRO1YPL084W YNR068CP53754 272 aa2.06□□□□□ -2.08
BRO1YPL084W ADA2Q02336 434 aa2.06□□□□□ -2.08
BRO1YPL084W DBP9Q06218 594 aaKnown RBP2.06□□□□□ -2.08
BRO1YPL084W RRG7Q08774 242 aaPredicted RBP2.06□□□□□ -2.08
BRO1YPL084W PGC1Q08959 321 aa2.06□□□□□ -2.08
BRO1YPL084W PIS1P06197 220 aaKnown RBP2.06□□□□□ -2.08
BRO1YPL084W PSO2P30620 661 aa2.06□□□□□ -2.08
BRO1YPL084W SMI1P32566 505 aa2.06□□□□□ -2.08
BRO1YPL084W TOA2P32774 122 aa2.06□□□□□ -2.08
BRO1YPL084W SWD3P38123 315 aa2.06□□□□□ -2.08
BRO1YPL084W YHK8P38776 514 aa2.06□□□□□ -2.08
BRO1YPL084W YHR131CP38835 850 aa2.06□□□□□ -2.08
BRO1YPL084W YMR102CQ03177 834 aa2.06□□□□□ -2.08
BRO1YPL084W TDA1Q03533 586 aa2.06□□□□□ -2.08
BRO1YPL084W LOT6Q07923 191 aa2.06□□□□□ -2.08
BRO1YPL084W PML1Q07930 204 aaPredicted RBP2.06□□□□□ -2.08
BRO1YPL084W SMC5Q08204 1093 aa2.06□□□□□ -2.08
BRO1YPL084W PEX27Q08580 376 aa2.06□□□□□ -2.08
BRO1YPL084W YGK3Q12222 375 aaPredicted RBP2.06□□□□□ -2.08
BRO1YPL084W EAF3Q12432 401 aa2.06□□□□□ -2.08
BRO1YPL084W SUP35P05453 685 aaKnown RBP2.05□□□□□ -2.08
BRO1YPL084W PTK1P36002 662 aaPredicted RBP2.05□□□□□ -2.08
BRO1YPL084W HAC1P41546 238 aa2.05□□□□□ -2.08
BRO1YPL084W CUE3P53137 624 aaKnown RBP2.05□□□□□ -2.08
BRO1YPL084W YNL143CP53908 130 aa2.05□□□□□ -2.08
BRO1YPL084W AQR1P53943 586 aa2.05□□□□□ -2.08
BRO1YPL084W UTP6Q02354 440 aaKnown RBP2.05□□□□□ -2.08
BRO1YPL084W YCR024C-BQ3E7Z8 88 aa2.05□□□□□ -2.08
BRO1YPL084W STE3P06783 470 aa2.05□□□□□ -2.08
BRO1YPL084W MRPL10P36520 322 aa2.05□□□□□ -2.08
BRO1YPL084W MAM33P40513 266 aa2.05□□□□□ -2.08
BRO1YPL084W SNL1P40548 159 aa2.05□□□□□ -2.08
BRO1YPL084W ALF1P53904 254 aa2.05□□□□□ -2.08
BRO1YPL084W RTN1Q04947 295 aaKnown RBP2.05□□□□□ -2.08
BRO1YPL084W RIF2Q06208 395 aa2.05□□□□□ -2.08
BRO1YPL084W IRC25Q07951 179 aa2.05□□□□□ -2.08
BRO1YPL084W FDH1Q08911 376 aa2.05□□□□□ -2.08
BRO1YPL084W HRT3Q12347 344 aa2.05□□□□□ -2.08
BRO1YPL084W SFG1Q12507 346 aa2.05□□□□□ -2.08
BRO1YPL084W IRC20Q06554 1556 aa2.04□□□□□ -2.08
BRO1YPL084W MSI1P13712 422 aa2.04□□□□□ -2.08
BRO1YPL084W TIR2P33890 251 aa2.04□□□□□ -2.08
BRO1YPL084W ECM8P38246 354 aa2.04□□□□□ -2.08
BRO1YPL084W RPA34P47006 233 aaPredicted RBP2.04□□□□□ -2.08
BRO1YPL084W ABM1P47146 123 aa2.04□□□□□ -2.08
BRO1YPL084W PSY3Q12318 242 aa2.04□□□□□ -2.08
BRO1YPL084W YOR012WQ12351 137 aa2.04□□□□□ -2.08
BRO1YPL084W IZH2Q12442 317 aa2.04□□□□□ -2.08
BRO1YPL084W YOR338WQ99326 363 aa2.04□□□□□ -2.08
BRO1YPL084W RDS1P25611 832 aa2.03□□□□□ -2.08
BRO1YPL084W MSK1P32048 576 aa2.03□□□□□ -2.08
BRO1YPL084W RAD5P32849 1169 aaPredicted RBP2.03□□□□□ -2.08
BRO1YPL084W SPT10P35208 640 aa2.03□□□□□ -2.08
BRO1YPL084W YIL089WP40500 205 aa2.03□□□□□ -2.08
BRO1YPL084W MPS2P53159 387 aa2.03□□□□□ -2.08
BRO1YPL084W TPM1P17536 199 aaKnown RBP2.03□□□□□ -2.08
BRO1YPL084W DBR1P24309 405 aaKnown RBP2.03□□□□□ -2.08
BRO1YPL084W RVS161P25343 265 aaKnown RBP2.03□□□□□ -2.08
BRO1YPL084W ANP1P32629 500 aa2.03□□□□□ -2.08
BRO1YPL084W NAS2P40555 220 aa2.03□□□□□ -2.08
BRO1YPL084W YFR057WP43625 151 aa2.03□□□□□ -2.08
BRO1YPL084W EFM3P47163 339 aa2.03□□□□□ -2.08
BRO1YPL084W RET3P53600 189 aa2.03□□□□□ -2.08
BRO1YPL084W PRM6Q04705 352 aa2.03□□□□□ -2.08
BRO1YPL084W YPR091CQ06833 770 aa2.03□□□□□ -2.08
BRO1YPL084W FCY22Q12119 530 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 100.4 ms