RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W YEF1P32622 495 aa4.08□□□□□ -1.76
VPS28YPL065W COX14P39103 70 aa4.08□□□□□ -1.76
VPS28YPL065W PAN6P40459 309 aa4.08□□□□□ -1.76
VPS28YPL065W MRM2P53123 320 aa4.08□□□□□ -1.76
VPS28YPL065W AAD15Q08361 143 aa4.08□□□□□ -1.76
VPS28YPL065W CEX1Q12453 761 aa4.08□□□□□ -1.76
VPS28YPL065W UBA1P22515 1024 aaKnown RBP4.07□□□□□ -1.76
VPS28YPL065W ARO2P28777 376 aaKnown RBP4.07□□□□□ -1.76
VPS28YPL065W DPH5P32469 300 aaPredicted RBP4.07□□□□□ -1.76
VPS28YPL065W TOA2P32774 122 aa4.07□□□□□ -1.76
VPS28YPL065W SKT5P34226 696 aa4.07□□□□□ -1.76
VPS28YPL065W GDT1P38301 280 aaPredicted RBP4.07□□□□□ -1.76
VPS28YPL065W PRE5P40302 234 aaKnown RBP4.07□□□□□ -1.76
VPS28YPL065W RRP46P53256 223 aaPredicted RBP4.07□□□□□ -1.76
VPS28YPL065W RRN9P53437 365 aa4.07□□□□□ -1.76
VPS28YPL065W PAL1Q05518 499 aaKnown RBP4.07□□□□□ -1.76
VPS28YPL065W DBP9Q06218 594 aaKnown RBP4.07□□□□□ -1.76
VPS28YPL065W MDM36Q06820 579 aa4.07□□□□□ -1.76
VPS28YPL065W LDS2Q08218 356 aa4.07□□□□□ -1.76
VPS28YPL065W YOP1Q12402 180 aa4.07□□□□□ -1.76
VPS28YPL065W RNA1P11745 407 aaKnown RBP4.06□□□□□ -1.76
VPS28YPL065W CLN3P13365 580 aa4.06□□□□□ -1.76
VPS28YPL065W PET123P17558 318 aa4.06□□□□□ -1.76
VPS28YPL065W CSE2P33308 149 aa4.06□□□□□ -1.76
VPS28YPL065W SWD3P38123 315 aa4.06□□□□□ -1.76
VPS28YPL065W GPX2P38143 162 aa4.06□□□□□ -1.76
VPS28YPL065W YGR210CP42942 411 aa4.06□□□□□ -1.76
VPS28YPL065W MDE1P47095 244 aa4.06□□□□□ -1.76
VPS28YPL065W YJR085CP47131 105 aaKnown RBP4.06□□□□□ -1.76
VPS28YPL065W YNR068CP53754 272 aa4.06□□□□□ -1.76
VPS28YPL065W UTP6Q02354 440 aaKnown RBP4.06□□□□□ -1.76
VPS28YPL065W NDE2Q07500 545 aa4.06□□□□□ -1.76
VPS28YPL065W PML1Q07930 204 aaPredicted RBP4.06□□□□□ -1.76
VPS28YPL065W PGC1Q08959 321 aa4.06□□□□□ -1.76
VPS28YPL065W ADH2P00331 348 aaKnown RBP4.05□□□□□ -1.76
VPS28YPL065W PAB1P04147 577 aaKnown RBP RIP-Chip data4.05□□□□□ -1.76not detected
VPS28YPL065W NAM2P11325 894 aa4.05□□□□□ -1.76
VPS28YPL065W PSO2P30620 661 aa4.05□□□□□ -1.76
VPS28YPL065W YEL045CP32616 141 aa4.05□□□□□ -1.76
VPS28YPL065W MCR1P36060 302 aaKnown RBP4.05□□□□□ -1.76
VPS28YPL065W LCB3P47013 409 aa4.05□□□□□ -1.76
VPS28YPL065W ABM1P47146 123 aa4.05□□□□□ -1.76
VPS28YPL065W ATP22P50273 684 aaPredicted RBP4.05□□□□□ -1.76
VPS28YPL065W SFG1Q12507 346 aa4.05□□□□□ -1.76
VPS28YPL065W TPM1P17536 199 aaKnown RBP4.04□□□□□ -1.76
VPS28YPL065W PTK1P36002 662 aaPredicted RBP4.04□□□□□ -1.76
VPS28YPL065W YHK8P38776 514 aa4.04□□□□□ -1.76
VPS28YPL065W BTN2P53286 410 aa4.04□□□□□ -1.76
VPS28YPL065W YNL143CP53908 130 aa4.04□□□□□ -1.76
VPS28YPL065W MTQ1P53944 314 aa4.04□□□□□ -1.76
VPS28YPL065W TDA1Q03533 586 aa4.04□□□□□ -1.76
VPS28YPL065W PEX27Q08580 376 aa4.04□□□□□ -1.76
VPS28YPL065W YOR012WQ12351 137 aa4.04□□□□□ -1.76
VPS28YPL065W YCR024C-BQ3E7Z8 88 aa4.04□□□□□ -1.76
VPS28YPL065W SMI1P32566 505 aa4.03□□□□□ -1.76
VPS28YPL065W GEP4P38812 185 aa4.03□□□□□ -1.76
VPS28YPL065W YHR131CP38835 850 aa4.03□□□□□ -1.76
VPS28YPL065W CUE3P53137 624 aaKnown RBP4.03□□□□□ -1.76
VPS28YPL065W AQR1P53943 586 aa4.03□□□□□ -1.76
VPS28YPL065W FDH1Q08911 376 aa4.03□□□□□ -1.76
VPS28YPL065W YGK3Q12222 375 aaPredicted RBP4.03□□□□□ -1.76
VPS28YPL065W PSY3Q12318 242 aa4.03□□□□□ -1.76
VPS28YPL065W EAF3Q12432 401 aa4.03□□□□□ -1.76
VPS28YPL065W TIR2P33890 251 aa4.02□□□□□ -1.77
VPS28YPL065W YBL028CP38202 106 aa4.02□□□□□ -1.77
VPS28YPL065W AIM24P47127 394 aa4.02□□□□□ -1.77
VPS28YPL065W YMR102CQ03177 834 aa4.02□□□□□ -1.77
VPS28YPL065W YPR078CQ06813 372 aa4.02□□□□□ -1.77
VPS28YPL065W RRG7Q08774 242 aaPredicted RBP4.02□□□□□ -1.77
VPS28YPL065W PIS1P06197 220 aaKnown RBP4.01□□□□□ -1.77
VPS28YPL065W STE3P06783 470 aa4.01□□□□□ -1.77
VPS28YPL065W MSI1P13712 422 aa4.01□□□□□ -1.77
VPS28YPL065W RDS1P25611 832 aa4.01□□□□□ -1.77
VPS28YPL065W ANP1P32629 500 aa4.01□□□□□ -1.77
VPS28YPL065W RPA34P47006 233 aaPredicted RBP4.01□□□□□ -1.77
VPS28YPL065W SDT1P53078 280 aa4.01□□□□□ -1.77
VPS28YPL065W MPS2P53159 387 aa4.01□□□□□ -1.77
VPS28YPL065W TRM112P53738 135 aaPredicted RBP4.01□□□□□ -1.77
VPS28YPL065W SMC5Q08204 1093 aa4.01□□□□□ -1.77
VPS28YPL065W HRT3Q12347 344 aa4.01□□□□□ -1.77
VPS28YPL065W DBR1P24309 405 aaKnown RBP4□□□□□ -1.77
VPS28YPL065W MSK1P32048 576 aa4□□□□□ -1.77
VPS28YPL065W SPT10P35208 640 aa4□□□□□ -1.77
VPS28YPL065W UIP5P36137 443 aa4□□□□□ -1.77
VPS28YPL065W MRPL10P36520 322 aa4□□□□□ -1.77
VPS28YPL065W NAS2P40555 220 aa4□□□□□ -1.77
VPS28YPL065W ADA2Q02336 434 aa4□□□□□ -1.77
VPS28YPL065W RTN1Q04947 295 aaKnown RBP4□□□□□ -1.77
VPS28YPL065W RIF2Q06208 395 aa4□□□□□ -1.77
VPS28YPL065W IRC25Q07951 179 aa4□□□□□ -1.77
VPS28YPL065W IZH2Q12442 317 aa4□□□□□ -1.77
VPS28YPL065W SUP35P05453 685 aaKnown RBP3.99□□□□□ -1.77
VPS28YPL065W SAG1P20840 650 aa3.99□□□□□ -1.77
VPS28YPL065W ISY1P21374 235 aaPredicted RBP3.99□□□□□ -1.77
VPS28YPL065W YEL043WP32618 956 aa3.99□□□□□ -1.77
VPS28YPL065W MAM33P40513 266 aa3.99□□□□□ -1.77
VPS28YPL065W SNL1P40548 159 aa3.99□□□□□ -1.77
VPS28YPL065W HAC1P41546 238 aa3.99□□□□□ -1.77
VPS28YPL065W EFM3P47163 339 aa3.99□□□□□ -1.77
VPS28YPL065W RET3P53600 189 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms